FFCP PHASE1:Hg19::chr8:72987810..72987826,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8989 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=497 | |||
|TSSclassifier=strong | |||
|UniProt=O75762 | |||
|association_with_transcript=0bp_to_NM_007332,uc003xza.2_5end | |||
|cluster_id=chr8:72987810..72987826,- | |||
|description=CAGE_peak_1_at_TRPA1_5end | |||
|id=chr8:72987810..72987826,- | |||
|ontology_enrichment_celltype=CL:0000055!8.20e-23!180;CL:0000057!2.38e-16!75;CL:0000680!9.11e-11!57;CL:0000056!9.11e-11!57;CL:0000355!9.11e-11!57;CL:0000192!1.89e-10!42;CL:0000514!1.89e-10!42;CL:0000187!1.31e-09!54;CL:0000393!3.01e-09!60;CL:0000211!3.01e-09!60;CL:0000183!3.16e-09!59;CL:0002334!5.03e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002552;1.26e-10;5!CL:0002334;8.80e-08;12!CL:0002504;4.81e-07;3!CL:1000279;4.81e-07;3!CL:1000280;4.81e-07;3!CL:0002622;5.19e-07;3!CL:0000192;7.13e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.06e-10,76;CL:0002552,1.17e-10,5;CL:0000192,4.27e-10,43;CL:0000514,4.27e-10,43;CL:0002334,8.39e-08,12;CL:0002504,4.82e-07,3;CL:1000279,4.82e-07,3;CL:1000280,4.82e-07,3;CL:0002622,5.21e-07,3;CL:0000680,5.23e-07,58;CL:0000056,5.23e-07,58;CL:0000355,5.23e-07,58;CL:0000187,7.47e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;7.13e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.43e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.11e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.04e-12!83;UBERON:0002329!1.04e-12!83;UBERON:0003077!1.04e-12!83;UBERON:0003059!1.04e-12!83;UBERON:0007282!1.04e-12!83;UBERON:0009618!1.04e-12!83;UBERON:0007285!1.04e-12!83;UBERON:0004290!2.14e-11!70;UBERON:0002385!3.64e-11!63;UBERON:0001015!3.64e-11!63;UBERON:0000383!3.64e-11!63;UBERON:0005256!5.80e-11!143;UBERON:0002100!1.24e-10!216;UBERON:0001134!4.49e-10!61;UBERON:0002036!4.49e-10!61;UBERON:0003082!4.49e-10!61;UBERON:0000486!7.71e-10!82;UBERON:0003104!4.69e-08!238;UBERON:0009142!4.69e-08!238;UBERON:0000481!7.35e-08!347;UBERON:0000475!2.72e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.98e-10;17!UBERON:0000059;7.93e-10;11!UBERON:0001155;8.27e-10;9!UBERON:0005409;3.49e-09;22!UBERON:0001555;5.11e-08;54!UBERON:0002119;2.82e-07;4!UBERON:0004921;5.75e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,6.33e-13,145;UBERON:0001555,6.33e-13,145;UBERON:0007026,6.33e-13,145;UBERON:0004119,8.34e-13,160;UBERON:0000925,8.34e-13,160;UBERON:0006595,8.34e-13,160;UBERON:0004122,2.15e-11,15;UBERON:0000160,2.02e-10,17;UBERON:0001046,2.40e-10,19;UBERON:0000162,3.17e-10,14;UBERON:0001353,3.17e-10,14;UBERON:0000163,3.17e-10,14;UBERON:0006866,3.17e-10,14;UBERON:0000164,3.17e-10,14;UBERON:0000931,3.17e-10,14;UBERON:0000059,6.78e-10,11;UBERON:0001155,8.73e-10,9;UBERON:0005256,9.43e-10,122;UBERON:0003104,1.05e-08,160;UBERON:0009142,1.05e-08,160;UBERON:0002385,1.96e-08,64;UBERON:0001015,1.96e-08,64;UBERON:0000383,1.96e-08,64;UBERON:0004921,6.45e-08,118;UBERON:0005409,8.95e-08,25;UBERON:0000161,1.10e-07,36;UBERON:0000486,3.08e-07,83;UBERON:0002119,3.13e-07,4;UBERON:0001134,5.00e-07,62;UBERON:0002036,5.00e-07,62;UBERON:0003082,5.00e-07,62;UBERON:0002329,6.12e-07,71;UBERON:0003059,6.12e-07,71;UBERON:0007282,6.12e-07,71;UBERON:0004290,6.12e-07,71;UBERON:0009618,6.12e-07,71;UBERON:0002100,8.60e-07,199;UBERON:0003077,9.07e-07,72;UBERON:0007285,9.07e-07,72 | |||
|phase1_expression=0.363356758541113,0,0.563817616383885,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,3.68600904752263,0.697801167972428,0,0,1.48519623552056,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,1.06729878806013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,1.41867352879343,0.560677600142307,1.06748995729705,0,0.311211035399766,0,0.163461903113459,0,0,1.40592859100278,0,0.570471821544449,1.04614076386261,0.469737994575059,0.809364721840658,0.842704840213491,37.9726758534101,60.8029870693251,3.82305390350332,276.804665746718,95.6923016308015,2.73048408581408,0.718618141816238,72.0478567723403,42.4151782365958,133.82196777886,0.438977620880838,0,63.2502227996773,0.567160915800105,0,0,0.423863802319124,0.300091096084402,1.23663035086127,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0,0.813357600086629,0.414644220061482,1.51392510525377,0.72995471815166,4.69348596989448,0,0,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0.325808305310325,32.2379783436669,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0.766765358330422,0,0,0,0,0,0.317489471460845,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0.799266537048298,34.886630452588,0,0,0.325736184293735,29.1421397968888,13.4631818398683,6.02878754119172,3.48613383440118,0.899756920638513,0,0,0,0,0,0,1.01346914667305,0.61642896765115,0.537182889719687,0,0,0,0,2.7950408664471,0,0,0,0,0,0,0,0.36807447515742,0,0.813795071099207,0,0,0,0,0,0,0,0,0,0.868836144680828,0.391602314925481,0,0,0,0,0,9.98612637062982,0.30239029332968,0,1.07423381301644,0.841980283299221,1.66580894032411,1.53512174720011,0.321707842287215,1.48418066444991,2.7757744884478,0.355123450626254,3.12083192852475,58.1564960685656,2.09178681227927,0,0,0,51.8961305704022,19.301663808712,33.1744769847343,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,1.08378575017541,0,0,0,0,0,0,0,0,0,0.412164046590889,0.732555718546747,1.07262349896764,0,0,1.6068392984416,0,0,0,0.275673144969061,0.537101224341368,0.725083469571143,0.340906509664404,0.0890320356467374,0.330569830721956,0,1.02090169995667,0.10115778085555,0.464845549297286,1.25924938732256,2.0911118104818,0.924100740528266,0,0,0.55597265731176,0.143124886741991,2.232950216158,0.949138274156178,0.571890581771475,0.255897791311334,2.1396949401696,0,0.78494864019923,156.668910555067,17.5703699031075,25.918728516051,0.202182481573316,1.58510321173008,1.26377536871694,2.92580243453754,0.974853958525138,3.16950440270266,106.879430632453,62.2183900596336,0,1.10273068709225,0,0,2.31510213706675,4.59126326432643,0.608731130888112,1.8589409885985,0,5.87986544036611,0,0.7133421029625,7.80474340955315,1.05553817648832,7.24448764511784,20.4915513833486,30.0943859410685,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,9.34993122192409,0,0.211125408127993,0.19924798825107,6.07824614168525,0,0.102268682502155,0,0.933118762985422,0,0,0,8.68061969605016,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0.0897576444097721,2.39024218228418,0,0.183195186803725,0,0,0.156980256395025,0,0,0.19606253431774,0.335643173951685,0,0,0,0,0,0,4.97630965539252,12.2956014659641,1.22206028986725,0,0,0,0.202203398942031,1.60515529459758,0,0,0,0,0,0,0,0.252746318513952,0.300646838828985,0.72581733978073,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,1.55182426381471,0,0,0,0.794858446811959,0.253243183823515,0,0.240476460754601,5.54977786322317,0,0,0,0,0,0,0,0,0,3.56993761727126,0,0,0,0,0,0,0.279282401272254,0,2.87149209830726,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0.83088067605837,0,0,0.0607495566580247,0,0.0788057072991982,0.157363764404994,0,0.179287339332845,0,0,0,0,0,0,0.653174720218818,0,0,0,31.7273856256352,0,0,0.129282956361551,0,1.53978154095896,0,0,0,0,0.496166021811951,0,0,0,0.544017803369474,0.5013797880454,0.306345576763462,0,0.157054096250234,0,0,0,0,0,0.124192805882767,0,0,0,0,0.470531639396343,0,1.88397337194073,0.298509605773748,0,0,0,0,0,0,0,0.466311601748341,0.591420599958536,2.23015474029183,3.59842489730884,6.05525531817412,1.24411862352257,0,4.17396049449387,16.528336989694,1.90402606084398,0.813741466409323,1.81848659202559,2.14821114084977,0,3.58286299828754,0,0.343395705182793,0,0,0,0.214441591374926,0,0.680117776536817,0.231522474323834,0,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| |||
|short_description=p1@TRPA1 | |||
}} |
Latest revision as of 01:23, 19 September 2015
Short description: | p1@TRPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRPA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_007332, uc003xza.2_5end |
EntrezGene: | TRPA1 |
HGNC: | 497 |
UniProt: | O75762 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.06e-10 | 76 |
fibroblast of gingiva | 1.17e-10 | 5 |
smooth muscle cell | 4.27e-10 | 43 |
smooth muscle myoblast | 4.27e-10 | 43 |
preadipocyte | 8.39e-08 | 12 |
enteric smooth muscle cell | 4.82e-07 | 3 |
smooth muscle cell of large intestine | 4.82e-07 | 3 |
smooth muscle cell of colon | 4.82e-07 | 3 |
prostate stromal cell | 5.21e-07 | 3 |
muscle precursor cell | 5.23e-07 | 58 |
myoblast | 5.23e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.23e-07 | 58 |
muscle cell | 7.47e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.11e-10 | 14 |