FFCP PHASE1:Mm9::chr5:122682269..122682291,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1160|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:122682269..122682291,+|id=chr5:122682269..122682291,+|ontology_enrichment_celltype=CL:0000791!4.26e-20!9;CL:0000789!4.26e-20!9;CL:0002420!4.26e-20!9;CL:0002419!4.26e-20!9;CL:0000790!4.26e-20!9;CL:0000838!4.82e-18!12;CL:0000624!5.73e-18!8;CL:0002031!1.95e-17!25;CL:0000542!1.82e-16!13;CL:0000051!1.82e-16!13;CL:0000084!4.65e-16!11;CL:0000827!4.65e-16!11;CL:0000988!1.33e-14!32;CL:0002032!1.33e-14!32;CL:0000037!1.33e-14!32;CL:0000566!1.33e-14!32;CL:0000837!1.33e-14!32;CL:0000893!7.72e-14!6;CL:0002489!7.72e-14!6;CL:0000898!7.72e-14!6;CL:0000809!7.72e-14!6;CL:0000810!7.72e-14!6;CL:0000895!7.72e-14!6;CL:0000808!7.72e-14!6;CL:0000894!7.72e-14!6;CL:0000806!7.72e-14!6;CL:0000807!7.72e-14!6;CL:0000805!7.72e-14!6;CL:0002425!7.72e-14!6;CL:0002436!7.72e-14!6;CL:0002427!7.72e-14!6;CL:0002428!7.72e-14!6;CL:0002429!7.72e-14!6;CL:0002433!7.72e-14!6;CL:0002431!7.72e-14!6;CL:0002432!7.72e-14!6;CL:0000738!5.12e-12!17;CL:0002087!5.12e-12!17;CL:0000553!4.24e-09!6;CL:0000556!4.24e-09!6;CL:0002320!6.87e-09!46;CL:0000134!6.87e-09!46;CL:0000219!5.48e-07!54|ontology_enrichment_celltype_v019_2=CL:0000791,1.05e-56,9;CL:0000789,1.05e-56,9;CL:0002420,1.05e-56,9;CL:0002419,1.05e-56,9;CL:0000790,1.05e-56,9;CL:0000838,2.99e-52,12;CL:0000624,2.49e-50,8;CL:0000542,3.61e-48,13;CL:0000051,3.61e-48,13;CL:0000084,2.82e-46,11;CL:0000827,2.82e-46,11;CL:0002031,1.64e-41,25;CL:0000893,5.52e-38,6;CL:0002489,5.52e-38,6;CL:0000898,5.52e-38,6;CL:0000809,5.52e-38,6;CL:0000810,5.52e-38,6;CL:0000895,5.52e-38,6;CL:0000808,5.52e-38,6;CL:0000894,5.52e-38,6;CL:0000806,5.52e-38,6;CL:0000807,5.52e-38,6;CL:0000805,5.52e-38,6;CL:0002425,5.52e-38,6;CL:0002436,5.52e-38,6;CL:0002427,5.52e-38,6;CL:0002428,5.52e-38,6;CL:0002429,5.52e-38,6;CL:0002433,5.52e-38,6;CL:0002431,5.52e-38,6;CL:0002432,5.52e-38,6;CL:0000738,1.23e-36,17;CL:0002087,1.23e-36,17;CL:0000988,3.50e-32,32;CL:0002032,3.50e-32,32;CL:0000037,3.50e-32,32;CL:0000837,3.50e-32,32;CL:0002320,5.11e-22,46;CL:0000134,5.11e-22,46;CL:0000219,1.45e-18,54;CL:0000723,1.88e-10,91;CL:0000048,1.88e-10,91;CL:0000553,8.35e-10,6;CL:0000556,8.35e-10,6;CL:0000034,1.03e-09,97;CL:0000625,6.29e-08,1;CL:0000945,1.14e-07,1;CL:0000236,1.14e-07,1;CL:0000826,1.14e-07,1;CL:0000815,1.78e-07,1;CL:0000792,1.78e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.33e-19!48;UBERON:0002390!2.89e-19!45;UBERON:0003061!2.89e-19!45;UBERON:0004177!9.07e-17!29;UBERON:0002370!2.22e-12!23;UBERON:0000974!2.22e-12!23;UBERON:0004807!2.22e-12!23;UBERON:0005058!2.22e-12!23;UBERON:0003351!2.22e-12!23;UBERON:0009113!2.22e-12!23;UBERON:0003295!2.22e-12!23;UBERON:0009722!2.22e-12!23;UBERON:0005562!2.22e-12!23;UBERON:0007690!2.22e-12!23;UBERON:0006562!9.78e-12!24;UBERON:0003408!9.78e-12!24;UBERON:0001557!9.78e-12!24;UBERON:0001042!9.78e-12!24;UBERON:0008814!9.78e-12!24;UBERON:0009145!9.78e-12!24;UBERON:0002405!1.67e-11!70;UBERON:0000065!3.07e-10!41;UBERON:0000072!4.30e-10!27;UBERON:0001004!6.73e-10!42;UBERON:0003081!1.17e-09!88;UBERON:0002384!6.87e-09!46;UBERON:0005057!9.85e-08!51;UBERON:0000063!4.10e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.11e-22,46;UBERON:0002193,5.38e-12,48;UBERON:0002405,5.38e-12,48;UBERON:0002390,1.94e-10,45;UBERON:0003061,1.94e-10,45;UBERON:0002370,9.94e-10,23;UBERON:0000974,9.94e-10,23;UBERON:0004807,9.94e-10,23;UBERON:0005058,9.94e-10,23;UBERON:0003351,9.94e-10,23;UBERON:0009113,9.94e-10,23;UBERON:0003295,9.94e-10,23;UBERON:0009722,9.94e-10,23;UBERON:0005562,9.94e-10,23;UBERON:0007690,9.94e-10,23;UBERON:0006562,2.61e-09,24;UBERON:0003408,2.61e-09,24;UBERON:0001557,2.61e-09,24;UBERON:0001042,2.61e-09,24;UBERON:0008814,2.61e-09,24;UBERON:0009145,2.61e-09,24;UBERON:0000072,3.10e-08,27;UBERON:0004177,1.21e-07,29;UBERON:0005057,1.21e-07,29;UBERON:0000029,3.16e-07,1;UBERON:0001097,3.16e-07,1;UBERON:0003968,3.16e-07,1;UBERON:0001467,3.16e-07,1|phase1_expression=0,0,0,0,0,0,0,2.1950964985068,7.180224829735,3.97909694747389,3.25314139628459,1.67521533890206,3.76641605848653,3.58423649917889,0.333109761815663,0.607425802169478,0,2.5236973228659,1.7824876368746,2.12194825899015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,8.70434570413613,5.71359458542189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.753473828018764,0.683471138605126,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0.292373642219257,0.0962118416403295,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr5:122682269..122682291,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1160 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:122682269..122682291,+ | |||
|description=CAGE_peak_at_chr5:122682269..122682291,+ | |||
|id=chr5:122682269..122682291,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.26e-20!9;CL:0000789!4.26e-20!9;CL:0002420!4.26e-20!9;CL:0002419!4.26e-20!9;CL:0000790!4.26e-20!9;CL:0000838!4.82e-18!12;CL:0000624!5.73e-18!8;CL:0002031!1.95e-17!25;CL:0000542!1.82e-16!13;CL:0000051!1.82e-16!13;CL:0000084!4.65e-16!11;CL:0000827!4.65e-16!11;CL:0000988!1.33e-14!32;CL:0002032!1.33e-14!32;CL:0000037!1.33e-14!32;CL:0000566!1.33e-14!32;CL:0000837!1.33e-14!32;CL:0000893!7.72e-14!6;CL:0002489!7.72e-14!6;CL:0000898!7.72e-14!6;CL:0000809!7.72e-14!6;CL:0000810!7.72e-14!6;CL:0000895!7.72e-14!6;CL:0000808!7.72e-14!6;CL:0000894!7.72e-14!6;CL:0000806!7.72e-14!6;CL:0000807!7.72e-14!6;CL:0000805!7.72e-14!6;CL:0002425!7.72e-14!6;CL:0002436!7.72e-14!6;CL:0002427!7.72e-14!6;CL:0002428!7.72e-14!6;CL:0002429!7.72e-14!6;CL:0002433!7.72e-14!6;CL:0002431!7.72e-14!6;CL:0002432!7.72e-14!6;CL:0000738!5.12e-12!17;CL:0002087!5.12e-12!17;CL:0000553!4.24e-09!6;CL:0000556!4.24e-09!6;CL:0002320!6.87e-09!46;CL:0000134!6.87e-09!46;CL:0000219!5.48e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.05e-56,9;CL:0000789,1.05e-56,9;CL:0002420,1.05e-56,9;CL:0002419,1.05e-56,9;CL:0000790,1.05e-56,9;CL:0000838,2.99e-52,12;CL:0000624,2.49e-50,8;CL:0000542,3.61e-48,13;CL:0000051,3.61e-48,13;CL:0000084,2.82e-46,11;CL:0000827,2.82e-46,11;CL:0002031,1.64e-41,25;CL:0000893,5.52e-38,6;CL:0002489,5.52e-38,6;CL:0000898,5.52e-38,6;CL:0000809,5.52e-38,6;CL:0000810,5.52e-38,6;CL:0000895,5.52e-38,6;CL:0000808,5.52e-38,6;CL:0000894,5.52e-38,6;CL:0000806,5.52e-38,6;CL:0000807,5.52e-38,6;CL:0000805,5.52e-38,6;CL:0002425,5.52e-38,6;CL:0002436,5.52e-38,6;CL:0002427,5.52e-38,6;CL:0002428,5.52e-38,6;CL:0002429,5.52e-38,6;CL:0002433,5.52e-38,6;CL:0002431,5.52e-38,6;CL:0002432,5.52e-38,6;CL:0000738,1.23e-36,17;CL:0002087,1.23e-36,17;CL:0000988,3.50e-32,32;CL:0002032,3.50e-32,32;CL:0000037,3.50e-32,32;CL:0000837,3.50e-32,32;CL:0002320,5.11e-22,46;CL:0000134,5.11e-22,46;CL:0000219,1.45e-18,54;CL:0000723,1.88e-10,91;CL:0000048,1.88e-10,91;CL:0000553,8.35e-10,6;CL:0000556,8.35e-10,6;CL:0000034,1.03e-09,97;CL:0000625,6.29e-08,1;CL:0000945,1.14e-07,1;CL:0000236,1.14e-07,1;CL:0000826,1.14e-07,1;CL:0000815,1.78e-07,1;CL:0000792,1.78e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.33e-19!48;UBERON:0002390!2.89e-19!45;UBERON:0003061!2.89e-19!45;UBERON:0004177!9.07e-17!29;UBERON:0002370!2.22e-12!23;UBERON:0000974!2.22e-12!23;UBERON:0004807!2.22e-12!23;UBERON:0005058!2.22e-12!23;UBERON:0003351!2.22e-12!23;UBERON:0009113!2.22e-12!23;UBERON:0003295!2.22e-12!23;UBERON:0009722!2.22e-12!23;UBERON:0005562!2.22e-12!23;UBERON:0007690!2.22e-12!23;UBERON:0006562!9.78e-12!24;UBERON:0003408!9.78e-12!24;UBERON:0001557!9.78e-12!24;UBERON:0001042!9.78e-12!24;UBERON:0008814!9.78e-12!24;UBERON:0009145!9.78e-12!24;UBERON:0002405!1.67e-11!70;UBERON:0000065!3.07e-10!41;UBERON:0000072!4.30e-10!27;UBERON:0001004!6.73e-10!42;UBERON:0003081!1.17e-09!88;UBERON:0002384!6.87e-09!46;UBERON:0005057!9.85e-08!51;UBERON:0000063!4.10e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.11e-22,46;UBERON:0002193,5.38e-12,48;UBERON:0002405,5.38e-12,48;UBERON:0002390,1.94e-10,45;UBERON:0003061,1.94e-10,45;UBERON:0002370,9.94e-10,23;UBERON:0000974,9.94e-10,23;UBERON:0004807,9.94e-10,23;UBERON:0005058,9.94e-10,23;UBERON:0003351,9.94e-10,23;UBERON:0009113,9.94e-10,23;UBERON:0003295,9.94e-10,23;UBERON:0009722,9.94e-10,23;UBERON:0005562,9.94e-10,23;UBERON:0007690,9.94e-10,23;UBERON:0006562,2.61e-09,24;UBERON:0003408,2.61e-09,24;UBERON:0001557,2.61e-09,24;UBERON:0001042,2.61e-09,24;UBERON:0008814,2.61e-09,24;UBERON:0009145,2.61e-09,24;UBERON:0000072,3.10e-08,27;UBERON:0004177,1.21e-07,29;UBERON:0005057,1.21e-07,29;UBERON:0000029,3.16e-07,1;UBERON:0001097,3.16e-07,1;UBERON:0003968,3.16e-07,1;UBERON:0001467,3.16e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,2.1950964985068,7.180224829735,3.97909694747389,3.25314139628459,1.67521533890206,3.76641605848653,3.58423649917889,0.333109761815663,0.607425802169478,0,2.5236973228659,1.7824876368746,2.12194825899015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,8.70434570413613,5.71359458542189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.753473828018764,0.683471138605126,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0.292373642219257,0.0962118416403295,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr5:122682269..122682291,+ | |||
}} |
Latest revision as of 05:36, 6 August 2015
Short description: | p@chr5:122682269..122682291, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:122682269..122682291, + |
Coexpression cluster: | MCL_coexpression_mm9:1160 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.11e-22 | 46 |
hemolymphoid system | 5.38e-12 | 48 |
immune system | 5.38e-12 | 48 |
hematopoietic system | 1.94e-10 | 45 |
blood island | 1.94e-10 | 45 |
thymus | 9.94e-10 | 23 |
neck | 9.94e-10 | 23 |
respiratory system epithelium | 9.94e-10 | 23 |
hemolymphoid system gland | 9.94e-10 | 23 |
pharyngeal epithelium | 9.94e-10 | 23 |
thymic region | 9.94e-10 | 23 |
pharyngeal gland | 9.94e-10 | 23 |
entire pharyngeal arch endoderm | 9.94e-10 | 23 |
thymus primordium | 9.94e-10 | 23 |
early pharyngeal endoderm | 9.94e-10 | 23 |
pharynx | 2.61e-09 | 24 |
gland of gut | 2.61e-09 | 24 |
upper respiratory tract | 2.61e-09 | 24 |
chordate pharynx | 2.61e-09 | 24 |
pharyngeal arch system | 2.61e-09 | 24 |
pharyngeal region of foregut | 2.61e-09 | 24 |
segment of respiratory tract | 3.10e-08 | 27 |
hemopoietic organ | 1.21e-07 | 29 |
immune organ | 1.21e-07 | 29 |
lymph node | 3.16e-07 | 1 |
axillary lymph node | 3.16e-07 | 1 |
peripheral lymph node | 3.16e-07 | 1 |
shoulder | 3.16e-07 | 1 |