FFCP PHASE1:Hg19::chr9:130541017..130541032,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10044 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16884 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N5H7 | |||
|association_with_transcript=0bp_to_ENST00000314830_5end | |||
|cluster_id=chr9:130541017..130541032,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_6_at_SH2D3C_5end | |||
|id=chr9:130541017..130541032,- | |||
|ontology_enrichment_celltype=CL:0000037!5.17e-47!172;CL:0000566!5.17e-47!172;CL:0000988!2.00e-44!182;CL:0002032!1.41e-42!165;CL:0000837!1.41e-42!165;CL:0000738!1.57e-42!140;CL:0002087!6.26e-38!119;CL:0000542!8.42e-36!53;CL:0000051!8.42e-36!53;CL:0000838!6.67e-35!52;CL:0002031!1.67e-34!124;CL:0000791!2.49e-18!18;CL:0000789!2.49e-18!18;CL:0002420!2.49e-18!18;CL:0002419!2.49e-18!18;CL:0000790!2.49e-18!18;CL:0000945!3.34e-17!24;CL:0000826!3.34e-17!24;CL:0000084!4.69e-16!25;CL:0000827!4.69e-16!25;CL:0000763!6.18e-13!112;CL:0000049!6.18e-13!112;CL:0000625!1.52e-12!11;CL:0000766!8.48e-10!76;CL:0000236!2.12e-09!14;CL:0000557!3.65e-08!71;CL:0002320!6.71e-08!365;CL:0000134!6.83e-08!358;CL:0000839!1.25e-07!70;CL:0002057!6.38e-07!42;CL:0002194!7.09e-07!63;CL:0000576!7.09e-07!63;CL:0000040!7.09e-07!63;CL:0000559!7.09e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.40e-31;53!CL:0000791;1.41e-29;18!CL:0000789;1.41e-29;18!CL:0002419;1.41e-29;18!CL:0000084;9.14e-26;25!CL:0000945;2.35e-24;24!CL:0000625;8.26e-24;11!CL:0000236;9.18e-12;13!CL:0002087;1.57e-08;104!CL:0000784;4.40e-08;3!CL:0000775;1.24e-07;3!CL:0000623;5.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.16e-56,53;CL:0000051,2.16e-56,53;CL:0000838,1.26e-54,52;CL:0000791,1.08e-29,18;CL:0000789,1.08e-29,18;CL:0002420,1.08e-29,18;CL:0002419,1.08e-29,18;CL:0000790,1.08e-29,18;CL:0000738,2.17e-28,136;CL:0000037,2.66e-26,168;CL:0002087,3.12e-26,115;CL:0000084,8.01e-26,25;CL:0000827,8.01e-26,25;CL:0000988,3.27e-24,177;CL:0000945,3.73e-24,24;CL:0000826,3.73e-24,24;CL:0000625,4.76e-24,11;CL:0002032,7.13e-23,161;CL:0000837,7.13e-23,161;CL:0002031,1.25e-20,120;CL:0000236,1.45e-13,14;CL:0000784,4.86e-08,3;CL:0000775,1.19e-07,3;CL:0000817,2.14e-07,3;CL:0000623,5.02e-07,3;CL:0000825,5.02e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.40e-31;53!CL:0000790;1.41e-29;18 | |||
|ontology_enrichment_disease=DOID:2531!3.06e-09!51;DOID:0060083!3.06e-09!51;DOID:1240!8.34e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.42e-17!102;UBERON:0003061!3.42e-17!102;UBERON:0002193!1.13e-15!112;UBERON:0000178!2.33e-09!15;UBERON:0000179!2.33e-09!15;UBERON:0000463!2.33e-09!15;UBERON:0004177!7.46e-08!7;UBERON:0002371!2.21e-07!80;UBERON:0002384!2.95e-07!375;UBERON:0007023!3.31e-07!115;UBERON:0002405!7.71e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.33e-14;15!UBERON:0000179;7.33e-14;15!UBERON:0000463;7.33e-14;15!UBERON:0002390;2.43e-13;32!UBERON:0002193;3.93e-08;42!UBERON:0004177;9.47e-08;5!UBERON:0005057;9.47e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.08e-14,15;UBERON:0000179,8.08e-14,15;UBERON:0000463,8.08e-14,15;UBERON:0004177,7.28e-12,7;UBERON:0005057,7.28e-12,7;UBERON:0002370,8.04e-11,4;UBERON:0005058,8.04e-11,4;UBERON:0009113,8.04e-11,4;UBERON:0003295,8.04e-11,4;UBERON:0005562,8.04e-11,4;UBERON:0003351,3.75e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06316195519468,1.47781061009902,2.12519109546934,0,1.15148819429164,0.309632246632152,0,0,0,1.31694240986513,0.284338464974843,0.880801318004542,0,0.200544447470142,0.868043482863407,0.447830948479849,0.647787332037959,0.515151135268373,0.872389432677388,0.377875943688809,0.485168122375632,0.464858073811369,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0.689491361473237,0,0,0.188242339542605,0,0.674170453335254,0.918251677112708,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0,1.05627643155971,0.212604299965044,0,0.22465726229299,0.450530678524519,0.64290234678832,0.570025487482497,1.19350006319454,0.730656615058536,0,0.546138611262131,3.55803701545422,1.70692089026603,2.00197993518006,1.14950487990897,1.32208974556972,1.90810750907073,0.569212969109448,0,1.52909291250092,0,0.560508562981536,0.263384084775077,1.57367816091066,1.17903228824749,0.205601498999509,1.83905144929746,4.56291173287027,4.73447805734733,1.94826728407911,3.23090324967003,0.883817722424512,1.99380505125259,2.97884250141517,1.66518715643378,2.21100890851793,3.4531959966772,2.21080014228679,1.44901542867526,3.41059095272739,5.08327573370455,4.18142095219907,3.39928028092699,3.44898444241729,1.71813722741315,4.55435445635105,5.41561204350964,3.90650072313851,5.70271226669025,2.55977702432214,3.58362511232371,2.49861453104692,4.2619905367923,2.46338399076314,1.20964045934839,1.60464117470104,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0.649094787309367,0,0,3.57735936458013,4.0039643754609,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.44024217006613,0.621984346622316,0.864719720501769,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03506518376698,2.1673383622212,1.50939302401662,1.66845947163673,0,0,0,0,0,5.24304916763028,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783204629850962,0.343143423810856,2.27444828735176,0.647142602455851,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0.429680979473094,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,3.04468565539302,0.764637207142375,3.41788312304498,4.04994018278241,3.70226045777575,1.29694662238543,2.16012574895246,5.55187623405989,0,0,0,1.67222857613147,2.30830740762312,2.13425530045242,0,0,2.48956981172077,0.635020748171649,0,0.842391534340376,1.82587743226554,0.156679895773023,0,0.338583555603207,0.481764225311099,0.403599414382095,0.425846237690326,0,0,0.671028323677248,0.166849141711909,0.19538809540204,0,0,0,0.66614393599564,0,0,0.293016358543788,0,2.45175445410452,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,1.23084805461069,0,0,0,1.02314474045374,0.197286811273867,2.3948309234694,0,0,0,0,0,0,2.17499872630438,0,0,0,1.37897349296586,0,0,0,0.120596438625408,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,1.72678282034527,0.332423363800313,0,0.392125068635479,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.067401132980677,0,0.234264445725339,1.45963831372533,0,0,0,0,0,0.252746318513952,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0.846733320657845,0,0.136203406111576,0,0,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.533937062838473,0,1.65695622138878,0.496166021811951,0.790446527591777,1.82688897571344,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0.39997479170986,0.533458648470704,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1829261750188,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0.596748666348824,0.376051641746286,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.177404740325278,2.88084968889448,0,0,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0.647428837187895,0.615976841137482,0,1.45713297917742,0,0,0,0,0,0,0.308696632431779,0.437119121007915,0,0,0,0,0,0.8453114551668,0,1.4097587696978,1.28915775947154,0.199882311849858,0,0,0,0,0.917458566809082,0.430018749454354,0,0.20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| |||
|short_description=p6@SH2D3C | |||
}} |
Latest revision as of 05:17, 25 September 2015
Short description: | p6@SH2D3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SH2D3C_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000314830_5end |
EntrezGene: | SH2D3C |
HGNC: | 16884 |
UniProt: | Q8N5H7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.16e-56 | 53 |
common lymphoid progenitor | 2.16e-56 | 53 |
lymphoid lineage restricted progenitor cell | 1.26e-54 | 52 |
mature alpha-beta T cell | 1.08e-29 | 18 |
alpha-beta T cell | 1.08e-29 | 18 |
immature T cell | 1.08e-29 | 18 |
mature T cell | 1.08e-29 | 18 |
immature alpha-beta T cell | 1.08e-29 | 18 |
leukocyte | 2.17e-28 | 136 |
hematopoietic stem cell | 2.66e-26 | 168 |
nongranular leukocyte | 3.12e-26 | 115 |
T cell | 8.01e-26 | 25 |
pro-T cell | 8.01e-26 | 25 |
hematopoietic cell | 3.27e-24 | 177 |
lymphocyte of B lineage | 3.73e-24 | 24 |
pro-B cell | 3.73e-24 | 24 |
CD8-positive, alpha-beta T cell | 4.76e-24 | 11 |
hematopoietic oligopotent progenitor cell | 7.13e-23 | 161 |
hematopoietic multipotent progenitor cell | 7.13e-23 | 161 |
hematopoietic lineage restricted progenitor cell | 1.25e-20 | 120 |
B cell | 1.45e-13 | 14 |
plasmacytoid dendritic cell | 4.86e-08 | 3 |
neutrophil | 1.19e-07 | 3 |
precursor B cell | 2.14e-07 | 3 |
natural killer cell | 5.02e-07 | 3 |
pro-NK cell | 5.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 8.08e-14 | 15 |
haemolymphatic fluid | 8.08e-14 | 15 |
organism substance | 8.08e-14 | 15 |
hemopoietic organ | 7.28e-12 | 7 |
immune organ | 7.28e-12 | 7 |
thymus | 8.04e-11 | 4 |
hemolymphoid system gland | 8.04e-11 | 4 |
thymic region | 8.04e-11 | 4 |
pharyngeal gland | 8.04e-11 | 4 |
thymus primordium | 8.04e-11 | 4 |
pharyngeal epithelium | 3.75e-07 | 6 |