FFCP PHASE1:Mm9::chr11:106078285..106078290,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:106078285..106078290,+
|short_description=p5@Ddx42
|description=CAGE_peak_5_at_Ddx42_5end
|association_with_transcript=45bp_to_ENSMUST00000021046,NM_02807...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72047 | |EntrezGene=72047 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q810A7 | |UniProt=Q810A7 | ||
|association_with_transcript=45bp_to_ENSMUST00000021046,NM_028074,uc007lyk.2,uc007lyl.2_5end | |||
|cluster_id=chr11:106078285..106078290,+ | |||
|description=CAGE_peak_5_at_Ddx42_5end | |||
|id=chr11:106078285..106078290,+ | |||
|ontology_enrichment_celltype=CL:0000144!6.82e-13!121;CL:0000012!6.82e-13!121;CL:0002371!3.85e-12!118;CL:0000117!8.78e-12!23;CL:0000337!8.78e-12!23;CL:0000548!1.17e-11!115;CL:0000004!1.17e-11!115;CL:0000255!1.17e-11!115;CL:0000540!7.29e-11!33;CL:0000047!7.29e-11!33;CL:0000031!7.29e-11!33;CL:0000404!7.29e-11!33;CL:0000221!1.23e-10!44;CL:0000133!1.23e-10!44;CL:0002321!1.95e-10!70;CL:0000220!1.95e-10!70;CL:0000393!2.25e-10!39;CL:0000211!2.25e-10!39;CL:0000055!3.92e-10!50;CL:0002319!4.32e-10!43;CL:0000034!2.24e-08!97;CL:0000723!3.60e-07!91;CL:0000048!3.60e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.27e-21,23;CL:0000337,7.27e-21,23;CL:0000393,1.12e-16,39;CL:0000211,1.12e-16,39;CL:0002321,4.04e-16,70;CL:0000540,1.23e-15,33;CL:0000047,1.23e-15,33;CL:0000031,1.23e-15,33;CL:0000404,1.23e-15,33;CL:0000221,4.45e-14,44;CL:0000133,4.45e-14,44;CL:0002319,4.57e-13,43;CL:0000034,9.23e-11,97;CL:0000723,1.18e-09,91;CL:0000048,1.18e-09,91;CL:0002609,5.94e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.11e-07,75;UBERON:0002020,4.13e-07,34;UBERON:0000073,5.60e-07,54;UBERON:0001017,7.47e-07,73 | |||
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| ||
|short_description=p5@Ddx42 | |||
}} | }} |
Latest revision as of 20:09, 26 September 2015
Short description: | p5@Ddx42 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ddx42_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_ENSMUST00000021046, NM_028074, uc007lyk.2, uc007lyl.2_5end |
EntrezGene: | Ddx42 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.27e-21 | 23 |
neuroblast (sensu Vertebrata) | 7.27e-21 | 23 |
electrically responsive cell | 1.12e-16 | 39 |
electrically active cell | 1.12e-16 | 39 |
embryonic cell | 4.04e-16 | 70 |
neuron | 1.23e-15 | 33 |
neuronal stem cell | 1.23e-15 | 33 |
neuroblast | 1.23e-15 | 33 |
electrically signaling cell | 1.23e-15 | 33 |
ectodermal cell | 4.45e-14 | 44 |
neurectodermal cell | 4.45e-14 | 44 |
neural cell | 4.57e-13 | 43 |
stem cell | 9.23e-11 | 97 |
somatic stem cell | 1.18e-09 | 91 |
multi fate stem cell | 1.18e-09 | 91 |
neuron of cerebral cortex | 5.94e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.11e-07 | 75 |
gray matter | 4.13e-07 | 34 |
regional part of nervous system | 5.60e-07 | 54 |
central nervous system | 7.47e-07 | 73 |