FFCP PHASE1:Mm9::chr7:112730112..112730128,-: Difference between revisions
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{{FFCP|EntrezGene=11785|HGNC=|MCL_coexpression_id=311|UniProt=Q9QXJ1|association_with_transcript=38bp_to_NM_009685_5end|description=CAGE_peak_4_at_Apbb1_5end|id=chr7:112730112..112730128,-|ontology_enrichment_celltype=CL:0000221!1.04e-09!44;CL:0000133!1.04e-09!44;CL:0002319!1.17e-09!43;CL:0000055!4.01e-08!50;CL:0000540!4.13e-08!33;CL:0000047!4.13e-08!33;CL:0000031!4.13e-08!33;CL:0000404!4.13e-08!33;CL:0000117!3.43e-07!23;CL:0000337!3.43e-07!23;CL:0000393!4.85e-07!39;CL:0000211!4.85e-07!39|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.34e-21!73;UBERON:0005743!8.34e-21!73;UBERON:0000073!2.06e-20!75;UBERON:0001016!2.06e-20!75;UBERON:0004121!4.66e-20!102;UBERON:0000924!4.66e-20!102;UBERON:0006601!4.66e-20!102;UBERON:0002346!5.43e-17!71;UBERON:0003075!5.43e-17!71;UBERON:0007284!5.43e-17!71;UBERON:0000033!1.35e-16!63;UBERON:0001049!1.30e-14!52;UBERON:0005068!1.30e-14!52;UBERON:0006241!1.30e-14!52;UBERON:0007135!1.30e-14!52;UBERON:0000955!5.83e-14!50;UBERON:0006238!5.83e-14!50;UBERON:0002616!1.96e-13!49;UBERON:0000025!1.27e-12!114;UBERON:0004111!2.55e-12!122;UBERON:0003056!5.13e-12!49;UBERON:0002020!2.04e-10!34;UBERON:0003080!1.81e-09!40;UBERON:0002780!4.97e-09!39;UBERON:0001890!4.97e-09!39;UBERON:0006240!4.97e-09!39;UBERON:0002791!2.46e-08!29;UBERON:0003528!2.46e-08!29;UBERON:0001893!2.46e-08!29;UBERON:0007811!1.50e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.04e-22,92;UBERON:0001017,1.39e-17,73;UBERON:0001016,1.04e-16,75;UBERON:0002346,5.59e-16,64;UBERON:0003075,5.59e-16,64;UBERON:0007284,5.59e-16,64;UBERON:0004121,3.64e-15,95;UBERON:0000924,3.64e-15,95;UBERON:0006601,3.64e-15,95;UBERON:0000073,2.01e-14,54;UBERON:0000025,2.09e-14,114;UBERON:0004111,4.08e-13,122;UBERON:0001049,4.83e-13,52;UBERON:0005068,4.83e-13,52;UBERON:0006241,4.83e-13,52;UBERON:0007135,4.83e-13,52;UBERON:0010371,2.20e-12,73;UBERON:0002020,6.45e-11,34;UBERON:0000955,1.04e-10,47;UBERON:0006238,1.04e-10,47;UBERON:0002616,4.55e-10,46;UBERON:0007100,1.36e-09,18;UBERON:0000948,1.36e-09,18;UBERON:0005498,1.36e-09,18;UBERON:0004140,1.36e-09,18;UBERON:0009881,1.36e-09,18;UBERON:0004141,1.36e-09,18;UBERON:0003084,1.36e-09,18;UBERON:0007005,1.36e-09,18;UBERON:0004139,1.36e-09,18;UBERON:0004291,1.36e-09,18;UBERON:0003528,9.53e-09,29;UBERON:0002791,9.53e-09,29;UBERON:0001893,9.53e-09,29;UBERON:0003056,1.33e-08,49;UBERON:0000483,4.72e-08,174;UBERON:0000119,9.33e-08,176;UBERON:0002021,1.17e-07,10;UBERON:0000411,1.17e-07,10;UBERON:0001950,1.17e-07,10;UBERON:0003076,1.35e-07,12;UBERON:0003057,1.35e-07,12;UBERON:0003080,2.03e-07,40;UBERON:0004535,2.51e-07,23;UBERON:0001009,2.51e-07,23;UBERON:0002619,5.22e-07,17;UBERON:0002780,6.83e-07,39;UBERON:0001890,6.83e-07,39;UBERON:0006240,6.83e-07,39|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.405507724878058,0.183546752161682,1.56478268869608,0.218025156380447,1.09843091367236,1.36100929351998,0.279972843250725,1.43752564364972,0.167782606057736,0,0,0,0.573066879877513,0,1.21389876515759,1.5869729378161,1.90149421051854,0.338844532069132,0,0,0,0,1.49800055259202,2.30530983192933,0.414758449233911,0.405017814995072,0.420649922702764,4.85606673486466,7.73039893330647,0.367472397644862,0.383381884072945,0,2.20231761998777,3.57524546638526,3.84016333140609,1.31886287730194,1.37231465403614,0.52091337055676,5.862842979029,1.68828783009504,3.81995619442025,1.47314292736834,0.854230084794618,1.3047961207771,0.075726193333184,0.377857800533928,0,0,0,0,0,0,1.12355536105401,0.170430322578058,0,0,0.563373679106722,1.28326477414318,0,0,0,0,0,0.34255163915718,0,0,0.867426633830679,0.608930956624282,0.691846491768175,0,0.470354828542819,0,0.247194967734374,0.144599356919912,0.884610551949874,1.13236794963186,0,0,0,1.46390398505774,2.09446706813455,0,0,0,0,1.9472783122627,2.28750301409313,0.628271760564322,2.08589184230732,4.09144731728529,3.94797284663164,5.19172041816825,0.611036183101898,0.248813941220186,0,0.420883711772948,0.780722657776222,0.919608417733892,1.26043490863744,0.60281927134286,1.2246569847239,2.8185018462667,2.81105173679186,2.84573707812917,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0,0,0,0,0,1.44988040774851,1.17263029990548,2.16074473753218,1.65721314909647,1.57411385397923,1.07986979021165,1.16266972375204,1.60964040839772,2.56883753207773,3.45575684818309,3.2833492815819,4.62092214411378,6.28659945928929,4.17145219052996,7.38135303182045,1.47202963994889,1.13195073617213,0,0,1.06644125267617,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.387904974335251,0.350679099451593,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.744281895337007,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11785 | |||
|HGNC= | |||
|MCL_coexpression_id=311 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QXJ1 | |||
|association_with_transcript=38bp_to_NM_009685_5end | |||
|cluster_id=chr7:112730112..112730128,- | |||
|description=CAGE_peak_4_at_Apbb1_5end | |||
|id=chr7:112730112..112730128,- | |||
|ontology_enrichment_celltype=CL:0000221!1.04e-09!44;CL:0000133!1.04e-09!44;CL:0002319!1.17e-09!43;CL:0000055!4.01e-08!50;CL:0000540!4.13e-08!33;CL:0000047!4.13e-08!33;CL:0000031!4.13e-08!33;CL:0000404!4.13e-08!33;CL:0000117!3.43e-07!23;CL:0000337!3.43e-07!23;CL:0000393!4.85e-07!39;CL:0000211!4.85e-07!39 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.34e-21!73;UBERON:0005743!8.34e-21!73;UBERON:0000073!2.06e-20!75;UBERON:0001016!2.06e-20!75;UBERON:0004121!4.66e-20!102;UBERON:0000924!4.66e-20!102;UBERON:0006601!4.66e-20!102;UBERON:0002346!5.43e-17!71;UBERON:0003075!5.43e-17!71;UBERON:0007284!5.43e-17!71;UBERON:0000033!1.35e-16!63;UBERON:0001049!1.30e-14!52;UBERON:0005068!1.30e-14!52;UBERON:0006241!1.30e-14!52;UBERON:0007135!1.30e-14!52;UBERON:0000955!5.83e-14!50;UBERON:0006238!5.83e-14!50;UBERON:0002616!1.96e-13!49;UBERON:0000025!1.27e-12!114;UBERON:0004111!2.55e-12!122;UBERON:0003056!5.13e-12!49;UBERON:0002020!2.04e-10!34;UBERON:0003080!1.81e-09!40;UBERON:0002780!4.97e-09!39;UBERON:0001890!4.97e-09!39;UBERON:0006240!4.97e-09!39;UBERON:0002791!2.46e-08!29;UBERON:0003528!2.46e-08!29;UBERON:0001893!2.46e-08!29;UBERON:0007811!1.50e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.04e-22,92;UBERON:0001017,1.39e-17,73;UBERON:0001016,1.04e-16,75;UBERON:0002346,5.59e-16,64;UBERON:0003075,5.59e-16,64;UBERON:0007284,5.59e-16,64;UBERON:0004121,3.64e-15,95;UBERON:0000924,3.64e-15,95;UBERON:0006601,3.64e-15,95;UBERON:0000073,2.01e-14,54;UBERON:0000025,2.09e-14,114;UBERON:0004111,4.08e-13,122;UBERON:0001049,4.83e-13,52;UBERON:0005068,4.83e-13,52;UBERON:0006241,4.83e-13,52;UBERON:0007135,4.83e-13,52;UBERON:0010371,2.20e-12,73;UBERON:0002020,6.45e-11,34;UBERON:0000955,1.04e-10,47;UBERON:0006238,1.04e-10,47;UBERON:0002616,4.55e-10,46;UBERON:0007100,1.36e-09,18;UBERON:0000948,1.36e-09,18;UBERON:0005498,1.36e-09,18;UBERON:0004140,1.36e-09,18;UBERON:0009881,1.36e-09,18;UBERON:0004141,1.36e-09,18;UBERON:0003084,1.36e-09,18;UBERON:0007005,1.36e-09,18;UBERON:0004139,1.36e-09,18;UBERON:0004291,1.36e-09,18;UBERON:0003528,9.53e-09,29;UBERON:0002791,9.53e-09,29;UBERON:0001893,9.53e-09,29;UBERON:0003056,1.33e-08,49;UBERON:0000483,4.72e-08,174;UBERON:0000119,9.33e-08,176;UBERON:0002021,1.17e-07,10;UBERON:0000411,1.17e-07,10;UBERON:0001950,1.17e-07,10;UBERON:0003076,1.35e-07,12;UBERON:0003057,1.35e-07,12;UBERON:0003080,2.03e-07,40;UBERON:0004535,2.51e-07,23;UBERON:0001009,2.51e-07,23;UBERON:0002619,5.22e-07,17;UBERON:0002780,6.83e-07,39;UBERON:0001890,6.83e-07,39;UBERON:0006240,6.83e-07,39 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.405507724878058,0.183546752161682,1.56478268869608,0.218025156380447,1.09843091367236,1.36100929351998,0.279972843250725,1.43752564364972,0.167782606057736,0,0,0,0.573066879877513,0,1.21389876515759,1.5869729378161,1.90149421051854,0.338844532069132,0,0,0,0,1.49800055259202,2.30530983192933,0.414758449233911,0.405017814995072,0.420649922702764,4.85606673486466,7.73039893330647,0.367472397644862,0.383381884072945,0,2.20231761998777,3.57524546638526,3.84016333140609,1.31886287730194,1.37231465403614,0.52091337055676,5.862842979029,1.68828783009504,3.81995619442025,1.47314292736834,0.854230084794618,1.3047961207771,0.075726193333184,0.377857800533928,0,0,0,0,0,0,1.12355536105401,0.170430322578058,0,0,0.563373679106722,1.28326477414318,0,0,0,0,0,0.34255163915718,0,0,0.867426633830679,0.608930956624282,0.691846491768175,0,0.470354828542819,0,0.247194967734374,0.144599356919912,0.884610551949874,1.13236794963186,0,0,0,1.46390398505774,2.09446706813455,0,0,0,0,1.9472783122627,2.28750301409313,0.628271760564322,2.08589184230732,4.09144731728529,3.94797284663164,5.19172041816825,0.611036183101898,0.248813941220186,0,0.420883711772948,0.780722657776222,0.919608417733892,1.26043490863744,0.60281927134286,1.2246569847239,2.8185018462667,2.81105173679186,2.84573707812917,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0,0,0,0,0,1.44988040774851,1.17263029990548,2.16074473753218,1.65721314909647,1.57411385397923,1.07986979021165,1.16266972375204,1.60964040839772,2.56883753207773,3.45575684818309,3.2833492815819,4.62092214411378,6.28659945928929,4.17145219052996,7.38135303182045,1.47202963994889,1.13195073617213,0,0,1.06644125267617,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.387904974335251,0.350679099451593,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0.179397413521912,0,2.03228509183265,0,0.488894929326078,0.339490171550376,0.704070744865506,1.00503754465089,1.42826184531608,2.92700471786698,0.788175720530955,1.32878813789265,1.11618338060241,1.96635977658886,1.55416483679306,2.89298117163023,0,0,0,0,4.33486592967038,6.79827782234778,0,1.26235463602186,1.26203287766503,1.56175497718655,1.93881057959519,0.955875191810208,0.668396022247182,0,0.404810701674894,0.876767573733936,0.790575555893047,2.24924921495265,0,0.712262414669021,0.488660878060728,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.905510786479282,0.214337035031592,0.886701168211368,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0.441056796109924,0.32977250588296,0.322928853391811,0.422190474497091,0.596861720015682,0,0,6.48988557036784,0,0.206386867963223,0.370389054739423,0,0,0,0,0.139951452323658,0,0,0.316335993581135,0,0.108005340821801,0,0.87345025498471,0.269728692769641,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0,0.241584120826006,0,0,0.202725215290164,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0.15241361331,0,0,0,0,2.0405734525369,0,0,0,0.772758376128762,0,0.183151624267265,0,0,5.64751842617067,4.14292712856459,4.01026859407578,4.1244763762485,4.11049511862385,1.5107877947794,2.02506750069542,0,2.26571204492102,1.03552062350364,0.207574695168353,0,0.341467211508268,0.729320151204882,0.628839487883947,1.10306105070008,1.55572709461131,0.618105171716683,0.320919209591815,0.758091635291392,1.2673964994512,1.13175804831646,0.936415074698824,0.704276676453562,0.804096565378586,0.952587382566147,0.579421629724277,0.578727661391115,0.412085900803307,0.883193520806384,2.40008476669791,1.06485483695602,0.953744759789284,0.436039249896986,1.69396884747595,1.18460451048347,1.28049581010941,0,1.49384525230448,1.12228454331548,1.42362021749009,1.37906275325789,1.63692417267876,0.464810523557898,0.964533054905707,1.74867404556562,1.16965804222704,1.07435527024149,2.10417165275728,1.32354851471709,0.231867835620421 | |||
|short_description=p4@Apbb1 | |||
}} |
Latest revision as of 16:31, 25 September 2015
Short description: | p4@Apbb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Apbb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:311 |
Association with transcript: | 38bp_to_NM_009685_5end |
EntrezGene: | Apbb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data