FFCP PHASE1:Mm9::chr7:134592623..134592680,-: Difference between revisions
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{{FFCP|EntrezGene=71131|HGNC=|MCL_coexpression_id=398|UniProt=Q8BKK5|association_with_transcript=0bp_to_ENSMUST00000053392,NM_175163,uc009jvl.2_5end|description=CAGE_peak_1_at_Zfp689_5end|id=chr7:134592623..134592680,-|ontology_enrichment_celltype=CL:0000540!2.63e-12!33;CL:0000047!2.63e-12!33;CL:0000031!2.63e-12!33;CL:0000404!2.63e-12!33;CL:0000117!3.71e-12!23;CL:0000337!3.71e-12!23;CL:0000393!1.22e-08!39;CL:0000211!1.22e-08!39;CL:0002319!1.15e-07!43;CL:0000221!1.98e-07!44;CL:0000133!1.98e-07!44|ontology_enrichment_celltype_v019_2=CL:0000540,2.55e-12,33;CL:0000047,2.55e-12,33;CL:0000031,2.55e-12,33;CL:0000404,2.55e-12,33;CL:0000117,3.59e-12,23;CL:0000337,3.59e-12,23;CL:0000393,1.28e-08,39;CL:0000211,1.28e-08,39;CL:0002319,1.28e-07,43;CL:0000221,2.21e-07,44;CL:0000133,2.21e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.42e-18!73;UBERON:0005743!3.42e-18!73;UBERON:0000073!2.83e-17!75;UBERON:0001016!2.83e-17!75;UBERON:0002346!1.37e-16!71;UBERON:0003075!1.37e-16!71;UBERON:0007284!1.37e-16!71;UBERON:0003056!5.64e-16!49;UBERON:0004121!9.63e-16!102;UBERON:0000924!9.63e-16!102;UBERON:0006601!9.63e-16!102;UBERON:0001049!9.71e-15!52;UBERON:0005068!9.71e-15!52;UBERON:0006241!9.71e-15!52;UBERON:0007135!9.71e-15!52;UBERON:0000033!2.13e-14!63;UBERON:0000955!3.14e-13!50;UBERON:0006238!3.14e-13!50;UBERON:0003080!7.55e-13!40;UBERON:0002616!1.18e-12!49;UBERON:0000153!1.45e-12!94;UBERON:0002780!1.60e-12!39;UBERON:0001890!1.60e-12!39;UBERON:0006240!1.60e-12!39;UBERON:0007811!3.48e-11!86;UBERON:0002020!4.21e-11!34;UBERON:0002791!8.07e-09!29;UBERON:0003528!8.07e-09!29;UBERON:0001893!8.07e-09!29|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.38e-19,64;UBERON:0003075,4.38e-19,64;UBERON:0007284,4.38e-19,64;UBERON:0001017,4.54e-18,73;UBERON:0004121,1.97e-17,95;UBERON:0000924,1.97e-17,95;UBERON:0006601,1.97e-17,95;UBERON:0001016,3.71e-17,75;UBERON:0010371,4.01e-17,73;UBERON:0003056,7.36e-16,49;UBERON:0000073,6.64e-15,54;UBERON:0001049,1.31e-14,52;UBERON:0005068,1.31e-14,52;UBERON:0006241,1.31e-14,52;UBERON:0007135,1.31e-14,52;UBERON:0010314,7.42e-13,92;UBERON:0003080,9.85e-13,40;UBERON:0000955,1.71e-12,47;UBERON:0006238,1.71e-12,47;UBERON:0002780,2.08e-12,39;UBERON:0001890,2.08e-12,39;UBERON:0006240,2.08e-12,39;UBERON:0002616,6.33e-12,46;UBERON:0002020,5.51e-11,34;UBERON:0003528,1.04e-08,29;UBERON:0002791,1.04e-08,29;UBERON:0001893,1.04e-08,29|phase1_expression=2.5623815536767,1.39590163055744,0.454999239389536,0.90739263392049,2.00358291978539,1.17515490338323,0.700837921786577,2.7115897922731,2.39340827657833,2.10658073689794,4.10923123741212,3.11111420081812,1.54080656938085,2.88487327982691,2.6648780945253,3.03712901084739,3.49780939064073,2.20823515750766,2.05671650408608,3.81950686618227,2.89147186513637,2.18440092641948,1.04479915655574,0.95995453676044,0.45881856213434,1.72269589234506,0.430761996159075,0.861884930743556,0.950117097281869,1.26015064879965,1.55211357458713,3.81018404075779,4.30545351309199,0,0.866554859253824,1.49611180822643,1.22501613757421,1.25559489221072,2.3440060335714,1.0470474879476,1.17646297606203,0.683045484958446,1.45653105909346,1.51076181570693,1.31790010585369,1.65192076945513,0.782391344348039,1.74420125104357,0.878744730937887,1.36100929351998,1.67983705950435,1.43752564364972,1.34226084846189,1.45072428402269,1.00828139742739,2.57259436035947,0.85960031981627,2.06268836910977,9.5088736604011,7.93486468908049,6.33831403506179,1.35537812827653,0,3.5995988691256,0.988866362566974,2.8419204597844,3.29560121570245,4.99483796918021,8.29516898467821,8.91039192989158,8.62332341540666,5.99867067247988,5.52171352379034,10.2892271340561,12.6516021744072,6.43453150627015,3.30347642998166,3.57524546638526,5.22262213071228,9.49581271657396,9.14876436024097,9.89735404057844,3.35019598801657,3.93933827022176,5.04234217663473,4.41942878210502,6.12198227436143,5.96478226640962,2.34751199332871,1.43585964202892,1.44932244350839,1.72084775396277,0,0,0.649776417447669,0,1.40444420131752,1.70430322578058,1.03914401841148,1.41335829804136,2.25349471642689,1.28326477414318,0,0,0.865964164044856,0.506719730950197,0.505524445014783,1.59857431606684,2.84831672011889,2.9688427812965,2.25530924795977,1.21786191324856,2.53677046981664,2.26083960828934,1.99900802130698,2.26199864393416,1.48316980640624,2.16899035379867,0.884610551949874,3.39710384889559,3.09178125844551,2.42437626567611,0,4.68449275218475,6.70229461803056,1.27728527604296,2.75574786363617,2.39961092397363,4.19331749341113,4.49371918214468,3.66000482254901,10.3036568732549,5.9100268865374,3.06858548796397,5.81806524766768,4.38051410282946,5.09196819251581,3.4833951770826,3.79084137650512,1.89397670297827,5.85541993332167,5.51765050640335,4.68161537493908,4.82255417074288,6.32739442107349,6.02134485338794,8.05834831213668,3.88055056108524,5.6047678162539,7.18603104637713,6.15828934573821,3.72632745126877,4.44875598760957,1.0447564995665,3.2925141825271,4.17971960318836,1.40442637462647,2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71131 | |||
|HGNC= | |||
|MCL_coexpression_id=398 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BKK5 | |||
|association_with_transcript=0bp_to_ENSMUST00000053392,NM_175163,uc009jvl.2_5end | |||
|cluster_id=chr7:134592623..134592680,- | |||
|description=CAGE_peak_1_at_Zfp689_5end | |||
|id=chr7:134592623..134592680,- | |||
|ontology_enrichment_celltype=CL:0000540!2.63e-12!33;CL:0000047!2.63e-12!33;CL:0000031!2.63e-12!33;CL:0000404!2.63e-12!33;CL:0000117!3.71e-12!23;CL:0000337!3.71e-12!23;CL:0000393!1.22e-08!39;CL:0000211!1.22e-08!39;CL:0002319!1.15e-07!43;CL:0000221!1.98e-07!44;CL:0000133!1.98e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.55e-12,33;CL:0000047,2.55e-12,33;CL:0000031,2.55e-12,33;CL:0000404,2.55e-12,33;CL:0000117,3.59e-12,23;CL:0000337,3.59e-12,23;CL:0000393,1.28e-08,39;CL:0000211,1.28e-08,39;CL:0002319,1.28e-07,43;CL:0000221,2.21e-07,44;CL:0000133,2.21e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.42e-18!73;UBERON:0005743!3.42e-18!73;UBERON:0000073!2.83e-17!75;UBERON:0001016!2.83e-17!75;UBERON:0002346!1.37e-16!71;UBERON:0003075!1.37e-16!71;UBERON:0007284!1.37e-16!71;UBERON:0003056!5.64e-16!49;UBERON:0004121!9.63e-16!102;UBERON:0000924!9.63e-16!102;UBERON:0006601!9.63e-16!102;UBERON:0001049!9.71e-15!52;UBERON:0005068!9.71e-15!52;UBERON:0006241!9.71e-15!52;UBERON:0007135!9.71e-15!52;UBERON:0000033!2.13e-14!63;UBERON:0000955!3.14e-13!50;UBERON:0006238!3.14e-13!50;UBERON:0003080!7.55e-13!40;UBERON:0002616!1.18e-12!49;UBERON:0000153!1.45e-12!94;UBERON:0002780!1.60e-12!39;UBERON:0001890!1.60e-12!39;UBERON:0006240!1.60e-12!39;UBERON:0007811!3.48e-11!86;UBERON:0002020!4.21e-11!34;UBERON:0002791!8.07e-09!29;UBERON:0003528!8.07e-09!29;UBERON:0001893!8.07e-09!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.38e-19,64;UBERON:0003075,4.38e-19,64;UBERON:0007284,4.38e-19,64;UBERON:0001017,4.54e-18,73;UBERON:0004121,1.97e-17,95;UBERON:0000924,1.97e-17,95;UBERON:0006601,1.97e-17,95;UBERON:0001016,3.71e-17,75;UBERON:0010371,4.01e-17,73;UBERON:0003056,7.36e-16,49;UBERON:0000073,6.64e-15,54;UBERON:0001049,1.31e-14,52;UBERON:0005068,1.31e-14,52;UBERON:0006241,1.31e-14,52;UBERON:0007135,1.31e-14,52;UBERON:0010314,7.42e-13,92;UBERON:0003080,9.85e-13,40;UBERON:0000955,1.71e-12,47;UBERON:0006238,1.71e-12,47;UBERON:0002780,2.08e-12,39;UBERON:0001890,2.08e-12,39;UBERON:0006240,2.08e-12,39;UBERON:0002616,6.33e-12,46;UBERON:0002020,5.51e-11,34;UBERON:0003528,1.04e-08,29;UBERON:0002791,1.04e-08,29;UBERON:0001893,1.04e-08,29 | |||
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| |||
|short_description=p1@Zfp689 | |||
}} |
Latest revision as of 22:42, 25 September 2015
Short description: | p1@Zfp689 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp689_5end |
Coexpression cluster: | MCL_coexpression_mm9:398 |
Association with transcript: | 0bp_to_ENSMUST00000053392, NM_175163, uc009jvl.2_5end |
EntrezGene: | Zfp689 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.55e-12 | 33 |
neuronal stem cell | 2.55e-12 | 33 |
neuroblast | 2.55e-12 | 33 |
electrically signaling cell | 2.55e-12 | 33 |
CNS neuron (sensu Vertebrata) | 3.59e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.59e-12 | 23 |
electrically responsive cell | 1.28e-08 | 39 |
electrically active cell | 1.28e-08 | 39 |
neural cell | 1.28e-07 | 43 |
ectodermal cell | 2.21e-07 | 44 |
neurectodermal cell | 2.21e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 4.38e-19 | 64 |
neural plate | 4.38e-19 | 64 |
presumptive neural plate | 4.38e-19 | 64 |
central nervous system | 4.54e-18 | 73 |
ectoderm-derived structure | 1.97e-17 | 95 |
ectoderm | 1.97e-17 | 95 |
presumptive ectoderm | 1.97e-17 | 95 |
nervous system | 3.71e-17 | 75 |
ecto-epithelium | 4.01e-17 | 73 |
pre-chordal neural plate | 7.36e-16 | 49 |
regional part of nervous system | 6.64e-15 | 54 |
neural tube | 1.31e-14 | 52 |
neural rod | 1.31e-14 | 52 |
future spinal cord | 1.31e-14 | 52 |
neural keel | 1.31e-14 | 52 |
structure with developmental contribution from neural crest | 7.42e-13 | 92 |
anterior neural tube | 9.85e-13 | 40 |
brain | 1.71e-12 | 47 |
future brain | 1.71e-12 | 47 |
regional part of forebrain | 2.08e-12 | 39 |
forebrain | 2.08e-12 | 39 |
future forebrain | 2.08e-12 | 39 |
regional part of brain | 6.33e-12 | 46 |
gray matter | 5.51e-11 | 34 |
brain grey matter | 1.04e-08 | 29 |
regional part of telencephalon | 1.04e-08 | 29 |
telencephalon | 1.04e-08 | 29 |