FFCP PHASE1:Mm9::chr7:134889768..134889835,+: Difference between revisions
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{{FFCP|EntrezGene=233902|HGNC=|MCL_coexpression_id=22|UniProt=Q6PB97|association_with_transcript=-453bp_to_ENSMUST00000033081,ENSMUST00000106277,NM_172748,uc009jwo.1_5end|description=CAGE_peak_1_at_Fbxl19_5end|id=chr7:134889768..134889835,+|ontology_enrichment_celltype=CL:0000221!1.10e-13!44;CL:0000133!1.10e-13!44;CL:0000117!1.50e-13!23;CL:0000337!1.50e-13!23;CL:0002319!1.62e-13!43;CL:0000540!2.76e-13!33;CL:0000047!2.76e-13!33;CL:0000031!2.76e-13!33;CL:0000404!2.76e-13!33;CL:0000393!1.64e-10!39;CL:0000211!1.64e-10!39;CL:0000055!2.53e-10!50;CL:0002321!1.36e-09!70;CL:0000220!1.36e-09!70|ontology_enrichment_celltype_v019_2=CL:0000221,9.08e-14,44;CL:0000133,9.08e-14,44;CL:0000117,1.24e-13,23;CL:0000337,1.24e-13,23;CL:0002319,1.33e-13,43;CL:0000540,2.28e-13,33;CL:0000047,2.28e-13,33;CL:0000031,2.28e-13,33;CL:0000404,2.28e-13,33;CL:0000393,1.42e-10,39;CL:0000211,1.42e-10,39;CL:0002321,4.90e-10,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.81e-17!73;UBERON:0005743!4.81e-17!73;UBERON:0000073!1.65e-16!75;UBERON:0001016!1.65e-16!75;UBERON:0002020!1.03e-14!34;UBERON:0004121!2.75e-13!102;UBERON:0000924!2.75e-13!102;UBERON:0006601!2.75e-13!102;UBERON:0001049!2.09e-12!52;UBERON:0005068!2.09e-12!52;UBERON:0006241!2.09e-12!52;UBERON:0007135!2.09e-12!52;UBERON:0002780!2.21e-12!39;UBERON:0001890!2.21e-12!39;UBERON:0006240!2.21e-12!39;UBERON:0003080!4.67e-12!40;UBERON:0002791!1.30e-11!29;UBERON:0003528!1.30e-11!29;UBERON:0001893!1.30e-11!29;UBERON:0003056!2.00e-11!49;UBERON:0002616!4.79e-11!49;UBERON:0000955!5.44e-11!50;UBERON:0006238!5.44e-11!50;UBERON:0000033!1.36e-10!63;UBERON:0002346!1.50e-09!71;UBERON:0003075!1.50e-09!71;UBERON:0007284!1.50e-09!71;UBERON:0000956!2.18e-08!21;UBERON:0001869!2.18e-08!21;UBERON:0000203!2.18e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.51e-17,73;UBERON:0001016,1.55e-16,75;UBERON:0004121,4.53e-15,95;UBERON:0000924,4.53e-15,95;UBERON:0006601,4.53e-15,95;UBERON:0002020,8.33e-15,34;UBERON:0000073,7.11e-14,54;UBERON:0002780,1.88e-12,39;UBERON:0001890,1.88e-12,39;UBERON:0006240,1.88e-12,39;UBERON:0001049,2.10e-12,52;UBERON:0005068,2.10e-12,52;UBERON:0006241,2.10e-12,52;UBERON:0007135,2.10e-12,52;UBERON:0003080,4.00e-12,40;UBERON:0003528,1.10e-11,29;UBERON:0002791,1.10e-11,29;UBERON:0001893,1.10e-11,29;UBERON:0003056,1.73e-11,49;UBERON:0002346,1.89e-11,64;UBERON:0003075,1.89e-11,64;UBERON:0007284,1.89e-11,64;UBERON:0010371,1.09e-10,73;UBERON:0002616,3.08e-10,46;UBERON:0000955,3.49e-10,47;UBERON:0006238,3.49e-10,47;UBERON:0000956,1.96e-08,21;UBERON:0001869,1.96e-08,21;UBERON:0000203,1.96e-08,21|phase1_expression=4.48416771893423,10.1202868215415,6.3699893514535,5.44435580352294,6.51164448930251,7.72244650794693,5.60670337429262,0.129123323441576,0.422366166455,0.936258105287974,0.171217968225505,0,0,0,0,0.202475267389826,0,0,0,0.42438965179803,4.16712121740242,2.08510997521859,2.08959831311148,5.59973479776923,5.50582274561208,9.18771142584032,7.75371593086335,6.03319451520489,4.3705386474966,3.78045194639896,4.43461021310609,1.90509202037889,3.07532393792285,0,4.62162591602039,4.48833542467929,3.87921776898501,0,0,0.523523743973798,0.588231488031014,0,0.485510353031154,1.6366586336825,1.82478476195126,2.56965453026354,7.04152209913235,3.70642765846759,3.29529274101708,4.08302788055995,3.49966054063406,8.62515386189829,0.167782606057736,0,0,2.31533492432352,3.43840127926508,2.57836046138721,24.6826082248709,19.5726662330652,18.3811107016792,5.42151251310611,5.33576877666684,4.49949858640699,1.97773272513395,2.8419204597844,3.59520132622086,9.22123932771731,14.7239249478038,12.6905582031789,16.4053469854078,15.1395021734016,12.589506834242,13.1065155160001,17.9231030804102,22.0612508786405,4.40463523997555,6.38436690425939,4.76180253094355,23.6076455037047,25.6165402086747,25.5247551572812,3.62937898701795,6.19038871034848,7.33431589328689,14.4368006882097,13.2405663143166,15.2847545576746,2.49896437999507,2.94729084416464,2.31891590961342,0,0,1.07940638327563,0,0,1.40444420131752,4.26075806445144,3.37721805983729,4.94675404314476,4.50698943285378,1.28326477414318,0,0,3.68034769719064,4.30711771307668,5.56076889516262,1.48439043634778,0,2.22663208597237,3.12273588179045,2.13125834818499,1.61430848079241,2.86373017049983,1.76383060703557,2.26199864393416,4.20231445148436,0.289198713839823,0,1.94120219936891,2.20841518460394,1.45462575940567,1.86391761218122,0.585561594023094,2.09446706813455,3.83185582812887,0.599075622529601,0.599902730993408,1.27070227073065,2.84602214869163,3.66000482254901,20.4816593943969,4.51943232499919,7.16003280524926,3.32460871295296,5.67844420737152,4.27725328171328,2.61254638281195,3.0326731012041,1.89397670297827,5.07469727554544,4.36813998423599,4.14142898552303,5.12396380641431,3.12967896096108,2.8185018462667,4.77878795254617,1.55222022443409,4.31135985865684,5.29497024469894,6.51019159406611,4.60311038097907,4.72680323683516,6.268538997399,5.76189981942242,4.37875387000685,1.40442637462647,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=233902 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PB97 | |||
|association_with_transcript=-453bp_to_ENSMUST00000033081,ENSMUST00000106277,NM_172748,uc009jwo.1_5end | |||
|cluster_id=chr7:134889768..134889835,+ | |||
|description=CAGE_peak_1_at_Fbxl19_5end | |||
|id=chr7:134889768..134889835,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.10e-13!44;CL:0000133!1.10e-13!44;CL:0000117!1.50e-13!23;CL:0000337!1.50e-13!23;CL:0002319!1.62e-13!43;CL:0000540!2.76e-13!33;CL:0000047!2.76e-13!33;CL:0000031!2.76e-13!33;CL:0000404!2.76e-13!33;CL:0000393!1.64e-10!39;CL:0000211!1.64e-10!39;CL:0000055!2.53e-10!50;CL:0002321!1.36e-09!70;CL:0000220!1.36e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,9.08e-14,44;CL:0000133,9.08e-14,44;CL:0000117,1.24e-13,23;CL:0000337,1.24e-13,23;CL:0002319,1.33e-13,43;CL:0000540,2.28e-13,33;CL:0000047,2.28e-13,33;CL:0000031,2.28e-13,33;CL:0000404,2.28e-13,33;CL:0000393,1.42e-10,39;CL:0000211,1.42e-10,39;CL:0002321,4.90e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.81e-17!73;UBERON:0005743!4.81e-17!73;UBERON:0000073!1.65e-16!75;UBERON:0001016!1.65e-16!75;UBERON:0002020!1.03e-14!34;UBERON:0004121!2.75e-13!102;UBERON:0000924!2.75e-13!102;UBERON:0006601!2.75e-13!102;UBERON:0001049!2.09e-12!52;UBERON:0005068!2.09e-12!52;UBERON:0006241!2.09e-12!52;UBERON:0007135!2.09e-12!52;UBERON:0002780!2.21e-12!39;UBERON:0001890!2.21e-12!39;UBERON:0006240!2.21e-12!39;UBERON:0003080!4.67e-12!40;UBERON:0002791!1.30e-11!29;UBERON:0003528!1.30e-11!29;UBERON:0001893!1.30e-11!29;UBERON:0003056!2.00e-11!49;UBERON:0002616!4.79e-11!49;UBERON:0000955!5.44e-11!50;UBERON:0006238!5.44e-11!50;UBERON:0000033!1.36e-10!63;UBERON:0002346!1.50e-09!71;UBERON:0003075!1.50e-09!71;UBERON:0007284!1.50e-09!71;UBERON:0000956!2.18e-08!21;UBERON:0001869!2.18e-08!21;UBERON:0000203!2.18e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.51e-17,73;UBERON:0001016,1.55e-16,75;UBERON:0004121,4.53e-15,95;UBERON:0000924,4.53e-15,95;UBERON:0006601,4.53e-15,95;UBERON:0002020,8.33e-15,34;UBERON:0000073,7.11e-14,54;UBERON:0002780,1.88e-12,39;UBERON:0001890,1.88e-12,39;UBERON:0006240,1.88e-12,39;UBERON:0001049,2.10e-12,52;UBERON:0005068,2.10e-12,52;UBERON:0006241,2.10e-12,52;UBERON:0007135,2.10e-12,52;UBERON:0003080,4.00e-12,40;UBERON:0003528,1.10e-11,29;UBERON:0002791,1.10e-11,29;UBERON:0001893,1.10e-11,29;UBERON:0003056,1.73e-11,49;UBERON:0002346,1.89e-11,64;UBERON:0003075,1.89e-11,64;UBERON:0007284,1.89e-11,64;UBERON:0010371,1.09e-10,73;UBERON:0002616,3.08e-10,46;UBERON:0000955,3.49e-10,47;UBERON:0006238,3.49e-10,47;UBERON:0000956,1.96e-08,21;UBERON:0001869,1.96e-08,21;UBERON:0000203,1.96e-08,21 | |||
|phase1_expression=4.48416771893423,10.1202868215415,6.3699893514535,5.44435580352294,6.51164448930251,7.72244650794693,5.60670337429262,0.129123323441576,0.422366166455,0.936258105287974,0.171217968225505,0,0,0,0,0.202475267389826,0,0,0,0.42438965179803,4.16712121740242,2.08510997521859,2.08959831311148,5.59973479776923,5.50582274561208,9.18771142584032,7.75371593086335,6.03319451520489,4.3705386474966,3.78045194639896,4.43461021310609,1.90509202037889,3.07532393792285,0,4.62162591602039,4.48833542467929,3.87921776898501,0,0,0.523523743973798,0.588231488031014,0,0.485510353031154,1.6366586336825,1.82478476195126,2.56965453026354,7.04152209913235,3.70642765846759,3.29529274101708,4.08302788055995,3.49966054063406,8.62515386189829,0.167782606057736,0,0,2.31533492432352,3.43840127926508,2.57836046138721,24.6826082248709,19.5726662330652,18.3811107016792,5.42151251310611,5.33576877666684,4.49949858640699,1.97773272513395,2.8419204597844,3.59520132622086,9.22123932771731,14.7239249478038,12.6905582031789,16.4053469854078,15.1395021734016,12.589506834242,13.1065155160001,17.9231030804102,22.0612508786405,4.40463523997555,6.38436690425939,4.76180253094355,23.6076455037047,25.6165402086747,25.5247551572812,3.62937898701795,6.19038871034848,7.33431589328689,14.4368006882097,13.2405663143166,15.2847545576746,2.49896437999507,2.94729084416464,2.31891590961342,0,0,1.07940638327563,0,0,1.40444420131752,4.26075806445144,3.37721805983729,4.94675404314476,4.50698943285378,1.28326477414318,0,0,3.68034769719064,4.30711771307668,5.56076889516262,1.48439043634778,0,2.22663208597237,3.12273588179045,2.13125834818499,1.61430848079241,2.86373017049983,1.76383060703557,2.26199864393416,4.20231445148436,0.289198713839823,0,1.94120219936891,2.20841518460394,1.45462575940567,1.86391761218122,0.585561594023094,2.09446706813455,3.83185582812887,0.599075622529601,0.599902730993408,1.27070227073065,2.84602214869163,3.66000482254901,20.4816593943969,4.51943232499919,7.16003280524926,3.32460871295296,5.67844420737152,4.27725328171328,2.61254638281195,3.0326731012041,1.89397670297827,5.07469727554544,4.36813998423599,4.14142898552303,5.12396380641431,3.12967896096108,2.8185018462667,4.77878795254617,1.55222022443409,4.31135985865684,5.29497024469894,6.51019159406611,4.60311038097907,4.72680323683516,6.268538997399,5.76189981942242,4.37875387000685,1.40442637462647,0.772043721344145,0.852490498186778,3.52113813310353,2.34526059981096,3.42117916775928,2.13070262026689,3.14822770795846,2.00547246753592,0.697601834251224,1.60964040839772,1.28441876603886,1.48103864922132,1.64167464079095,0.729619285912702,0.877199924551994,1.09775057645525,0.671032093801859,4.41608891984667,7.71784592844633,7.93005079161115,3.96675849995316,4.47905326123991,3.25131340604614,3.47942145569652,3.22693639397348,3.11329261382818,4.37518940058886,8.0669940462567,2.79988223030818,3.2673577144035,3.78017296878187,2.72949721966768,5.39291645192533,4.10662294761919,5.97423819763102,4.1726938209678,4.68418901699888,3.38123207019241,5.09128319613286,4.46090720485539,3.99774173374816,3.60448261608267,2.06654207171443,2.82597710114475,1.23397163921801,0,0.500535317148282,0.982794975566015,0.899448449539415,0.202860121388503,0,1.01850340712568,0.575392274901621,0.810676133875177,0.823684239564244,2.87536413054709,0.372140947668503,1.87222603868736,0.252578877947112,0,0.482443521363367,1.66277871149944,3.22135400009824,2.44447464663039,6.28056817368196,2.34690248288502,1.67506257441816,2.61848004974615,5.26860849216057,2.36452716159286,1.99318220683897,3.98636921643718,2.62181303545181,2.24490476425664,2.31438493730419,1.50791283939272,1.08781136763742,0.491764273019036,3.86311444826625,1.9266070798535,1.64096361229084,1.80328439914343,0.504941854408746,1.89304931649754,2.73307121007647,3.66219776145758,5.9742199488138,4.23317480756549,4.52922449262132,6.47697122679831,4.67609372658099,4.34816555741176,3.53453448063988,3.40656204499845,6.94455854302295,3.4206261464251,3.46437258242324,1.32745138339963,3.8844901784797,4.83717691143602,3.39489143560617,1.77181135728464,1.84461088766356,1.80899805217755,2.90826983582004,1.42598951353889,1.58018378967908,0,0,0.340439605753788,5.221771726908,9.18446654857557,6.00143698088458,3.90148514013002,4.63758925765383,5.59466670047211,3.65357938937519,4.92810586933792,4.87213762986786,1.32317038832977,1.81374878235628,3.22928853391811,2.95533332147964,4.53614907211919,3.11867709515616,4.95517422270746,1.29797711407357,0,3.92135049130123,2.03713980106683,0.941842285023455,0.27338845544205,0.915112692826091,0.509935289981566,1.53946597556024,0.967399816630967,2.86401185404534,5.852215881251,4.87966721104437,6.15630442684267,5.64538399239065,4.58561383866973,3.64133735239016,3.55409859618945,2.6175594198403,3.36998930558661,2.4853572523477,1.12738587736838,5.08356256549528,3.64008679005615,5.25018208528929,6.45799117388655,5.57555214119568,1.64300134104056,5.85919731797776,3.35549902162275,2.41584120826006,1.44015003128933,0.316011120628178,2.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| |||
|short_description=p1@Fbxl19 | |||
}} |
Latest revision as of 22:59, 25 September 2015
Short description: | p1@Fbxl19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fbxl19_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -453bp_to_ENSMUST00000033081, ENSMUST00000106277, NM_172748, uc009jwo.1_5end |
EntrezGene: | Fbxl19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 9.08e-14 | 44 |
neurectodermal cell | 9.08e-14 | 44 |
CNS neuron (sensu Vertebrata) | 1.24e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-13 | 23 |
neural cell | 1.33e-13 | 43 |
neuron | 2.28e-13 | 33 |
neuronal stem cell | 2.28e-13 | 33 |
neuroblast | 2.28e-13 | 33 |
electrically signaling cell | 2.28e-13 | 33 |
electrically responsive cell | 1.42e-10 | 39 |
electrically active cell | 1.42e-10 | 39 |
embryonic cell | 4.90e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.51e-17 | 73 |
nervous system | 1.55e-16 | 75 |
ectoderm-derived structure | 4.53e-15 | 95 |
ectoderm | 4.53e-15 | 95 |
presumptive ectoderm | 4.53e-15 | 95 |
gray matter | 8.33e-15 | 34 |
regional part of nervous system | 7.11e-14 | 54 |
regional part of forebrain | 1.88e-12 | 39 |
forebrain | 1.88e-12 | 39 |
future forebrain | 1.88e-12 | 39 |
neural tube | 2.10e-12 | 52 |
neural rod | 2.10e-12 | 52 |
future spinal cord | 2.10e-12 | 52 |
neural keel | 2.10e-12 | 52 |
anterior neural tube | 4.00e-12 | 40 |
brain grey matter | 1.10e-11 | 29 |
regional part of telencephalon | 1.10e-11 | 29 |
telencephalon | 1.10e-11 | 29 |
pre-chordal neural plate | 1.73e-11 | 49 |
neurectoderm | 1.89e-11 | 64 |
neural plate | 1.89e-11 | 64 |
presumptive neural plate | 1.89e-11 | 64 |
ecto-epithelium | 1.09e-10 | 73 |
regional part of brain | 3.08e-10 | 46 |
brain | 3.49e-10 | 47 |
future brain | 3.49e-10 | 47 |
cerebral cortex | 1.96e-08 | 21 |
cerebral hemisphere | 1.96e-08 | 21 |
pallium | 1.96e-08 | 21 |