FFCP PHASE1:Hg19::chrY:15863548..15863573,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=6214|UniProt=|association_with_transcript=12bp_to_ENST00000472227_5end|coexpression_cluster_id=C425|description=CAGE_peak_1_at_KALP_5end|id=chrY:15863548..15863573,+|ontology_enrichment_celltype=CL:0002393!3.69e-14!9;CL:0002397!3.69e-14!9|ontology_enrichment_celltype_v019=CL:0002393;4.18e-24;6!CL:0002397;4.18e-24;6!CL:0000576;1.34e-11;48!CL:0000766;9.88e-11;69!CL:0000235;9.89e-10;6!CL:0002619;4.78e-09;3!CL:0000875;1.01e-08;3!CL:0000767;1.01e-08;3!CL:0002396;1.01e-08;3!CL:0000094;4.31e-07;8|ontology_enrichment_celltype_v019_2=CL:0002393,4.62e-30,9;CL:0002397,4.62e-30,9;CL:0000766,3.79e-22,72;CL:0002194,6.61e-19,59;CL:0000576,6.61e-19,59;CL:0000040,6.61e-19,59;CL:0000559,6.61e-19,59;CL:0002009,3.39e-18,61;CL:0000473,6.26e-18,48;CL:0000234,6.26e-18,48;CL:0000839,1.31e-16,66;CL:0000557,2.56e-16,67;CL:0000763,1.37e-13,108;CL:0000049,1.37e-13,108;CL:0000738,6.78e-13,136;CL:0000860,6.47e-12,42;CL:0002057,6.47e-12,42;CL:0002087,4.45e-11,115;CL:0000235,7.16e-10,6;CL:0000037,1.13e-09,168;CL:0002619,3.21e-09,3;CL:0002031,4.38e-09,120;CL:0002032,4.86e-09,161;CL:0000837,4.86e-09,161;CL:0000988,5.62e-09,177;CL:0000875,1.56e-08,3;CL:0000767,1.56e-08,3;CL:0002396,1.56e-08,3;CL:0000094,5.07e-07,8|ontology_enrichment_development_v019=CL:0002057;9.12e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1799;3.72e-07;1!DOID:10165;3.72e-07;1!DOID:1798;3.72e-07;1|ontology_enrichment_disease_v019_2=DOID:1799,3.21e-07,1;DOID:10165,3.21e-07,1;DOID:1798,3.21e-07,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.72e-14,76;UBERON:0002390,1.37e-13,98;UBERON:0003061,1.37e-13,98;UBERON:0001474,8.15e-13,82;UBERON:0002193,5.07e-12,108;UBERON:0004765,2.02e-11,90;UBERON:0002405,5.83e-11,93;UBERON:0001434,5.42e-10,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,1.15148819429164,1.08371286321253,0,0,0,0,0,0,1.10799081706375,1.00272223735071,1.73608696572681,3.13481663935894,0,1.80302897343931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05627643155971,0.425208599930087,1.04829322754188,1.34794357375794,1.05123824989054,2.4108838004562,1.14005097496499,0.39783335439818,1.0959849225878,0,0,0,0.426730222566507,0,0,0,0,0,0,0.764546456250458,0,0,0,0.590129310341499,1.17903228824749,0,0.167186495390678,0,0.473447805734733,0,0.334231370655521,0.294605907474837,0,0,0.128091319725675,0.260118695119756,0.657751618414705,1.38175008892924,0.869409257205157,0.593146252648242,0.535081656179426,0,0.339928028092699,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0.515281080091258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,3.01354254859276,0,0,0,0,0,0,0,0,0,0.646882724578552,0.256686072559497,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37285620900479,0.74709290462411,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.385076685522074,1.56869953835371,1.46139224653261,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0.714695326373367,1.23408681925858,0,0,0,3.31154620495167,0.962479855263359,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.398495976502139,0.828851746593443,0,0,0.123084805461069,0,0.718946809178615,0.716084698702437,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0.254253650292766,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977826347298073,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.343609788497747,2.23073497220554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,23.3092065274278,0,0,0,0,0.0607495566580247,0,0,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558867626472451,0.553394539744923,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0.19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| {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=6214 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENST00000472227_5end | |||
|cluster_id=chrY:15863548..15863573,+ | |||
|coexpression_cluster_id=C425 | |||
|description=CAGE_peak_1_at_KALP_5end | |||
|id=chrY:15863548..15863573,+ | |||
|ontology_enrichment_celltype=CL:0002393!3.69e-14!9;CL:0002397!3.69e-14!9 | |||
|ontology_enrichment_celltype_v019=CL:0002393;4.18e-24;6!CL:0002397;4.18e-24;6!CL:0000576;1.34e-11;48!CL:0000766;9.88e-11;69!CL:0000235;9.89e-10;6!CL:0002619;4.78e-09;3!CL:0000875;1.01e-08;3!CL:0000767;1.01e-08;3!CL:0002396;1.01e-08;3!CL:0000094;4.31e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,4.62e-30,9;CL:0002397,4.62e-30,9;CL:0000766,3.79e-22,72;CL:0002194,6.61e-19,59;CL:0000576,6.61e-19,59;CL:0000040,6.61e-19,59;CL:0000559,6.61e-19,59;CL:0002009,3.39e-18,61;CL:0000473,6.26e-18,48;CL:0000234,6.26e-18,48;CL:0000839,1.31e-16,66;CL:0000557,2.56e-16,67;CL:0000763,1.37e-13,108;CL:0000049,1.37e-13,108;CL:0000738,6.78e-13,136;CL:0000860,6.47e-12,42;CL:0002057,6.47e-12,42;CL:0002087,4.45e-11,115;CL:0000235,7.16e-10,6;CL:0000037,1.13e-09,168;CL:0002619,3.21e-09,3;CL:0002031,4.38e-09,120;CL:0002032,4.86e-09,161;CL:0000837,4.86e-09,161;CL:0000988,5.62e-09,177;CL:0000875,1.56e-08,3;CL:0000767,1.56e-08,3;CL:0002396,1.56e-08,3;CL:0000094,5.07e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;9.12e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;3.72e-07;1!DOID:10165;3.72e-07;1!DOID:1798;3.72e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.21e-07,1;DOID:10165,3.21e-07,1;DOID:1798,3.21e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.72e-14,76;UBERON:0002390,1.37e-13,98;UBERON:0003061,1.37e-13,98;UBERON:0001474,8.15e-13,82;UBERON:0002193,5.07e-12,108;UBERON:0004765,2.02e-11,90;UBERON:0002405,5.83e-11,93;UBERON:0001434,5.42e-10,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,1.15148819429164,1.08371286321253,0,0,0,0,0,0,1.10799081706375,1.00272223735071,1.73608696572681,3.13481663935894,0,1.80302897343931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05627643155971,0.425208599930087,1.04829322754188,1.34794357375794,1.05123824989054,2.4108838004562,1.14005097496499,0.39783335439818,1.0959849225878,0,0,0,0.426730222566507,0,0,0,0,0,0,0.764546456250458,0,0,0,0.590129310341499,1.17903228824749,0,0.167186495390678,0,0.473447805734733,0,0.334231370655521,0.294605907474837,0,0,0.128091319725675,0.260118695119756,0.657751618414705,1.38175008892924,0.869409257205157,0.593146252648242,0.535081656179426,0,0.339928028092699,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0.515281080091258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,3.01354254859276,0,0,0,0,0,0,0,0,0,0.646882724578552,0.256686072559497,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37285620900479,0.74709290462411,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.385076685522074,1.56869953835371,1.46139224653261,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0.714695326373367,1.23408681925858,0,0,0,3.31154620495167,0.962479855263359,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.398495976502139,0.828851746593443,0,0,0.123084805461069,0,0.718946809178615,0.716084698702437,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0.254253650292766,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977826347298073,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.343609788497747,2.23073497220554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,23.3092065274278,0,0,0,0,0.0607495566580247,0,0,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558867626472451,0.553394539744923,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0.41023272848151,0.504143392443436,0.0691572524642179,0,0,0,2.71330363699803,0.550285795565037,0,0,0,0,0,0,0,1.30953347240711,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.203909198930495,0.131545547125698,0.236387681767936,0,1.25588948560822,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,3.74104367371785,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0.387533459016037,0.993195428733726,0.112131862580613,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0.569822880276821,0,0,0,0,0,0,0,0.805095174364105,0 | |||
|short_description=p1@KALP | |||
}} |
Latest revision as of 16:54, 16 September 2015
Short description: | p1@KALP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KALP_5end |
Coexpression cluster: | C425_iPS_HES3GFP_H9_teratocarcinoma_testicular_hepatocellular_Wilms |
Association with transcript: | 12bp_to_ENST00000472227_5end |
EntrezGene: | NA |
HGNC: | 6214 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 4.62e-30 | 9 |
CD14-positive, CD16-positive monocyte | 4.62e-30 | 9 |
myeloid leukocyte | 3.79e-22 | 72 |
monopoietic cell | 6.61e-19 | 59 |
monocyte | 6.61e-19 | 59 |
monoblast | 6.61e-19 | 59 |
promonocyte | 6.61e-19 | 59 |
macrophage dendritic cell progenitor | 3.39e-18 | 61 |
defensive cell | 6.26e-18 | 48 |
phagocyte | 6.26e-18 | 48 |
myeloid lineage restricted progenitor cell | 1.31e-16 | 66 |
granulocyte monocyte progenitor cell | 2.56e-16 | 67 |
myeloid cell | 1.37e-13 | 108 |
common myeloid progenitor | 1.37e-13 | 108 |
leukocyte | 6.78e-13 | 136 |
classical monocyte | 6.47e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.47e-12 | 42 |
nongranular leukocyte | 4.45e-11 | 115 |
macrophage | 7.16e-10 | 6 |
hematopoietic stem cell | 1.13e-09 | 168 |
adult endothelial progenitor cell | 3.21e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 4.38e-09 | 120 |
hematopoietic oligopotent progenitor cell | 4.86e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.86e-09 | 161 |
hematopoietic cell | 5.62e-09 | 177 |
non-classical monocyte | 1.56e-08 | 3 |
basophil | 1.56e-08 | 3 |
CD14-low, CD16-positive monocyte | 1.56e-08 | 3 |
granulocyte | 5.07e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.72e-14 | 76 |
hematopoietic system | 1.37e-13 | 98 |
blood island | 1.37e-13 | 98 |
bone element | 8.15e-13 | 82 |
hemolymphoid system | 5.07e-12 | 108 |
skeletal element | 2.02e-11 | 90 |
immune system | 5.83e-11 | 93 |
skeletal system | 5.42e-10 | 100 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.21e-07 | 1 |
endocrine pancreas cancer | 3.21e-07 | 1 |
pancreatic endocrine carcinoma | 3.21e-07 | 1 |