FFCP PHASE1:Mm9::chr7:25692637..25692651,+: Difference between revisions
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{{FFCP|EntrezGene=16801|HGNC=|MCL_coexpression_id=33|UniProt=D3YVJ9|association_with_transcript=-14bp_to_ENSMUST00000151121_5end|description=CAGE_peak_15_at_Arhgef1_5end|id=chr7:25692637..25692651,+|ontology_enrichment_celltype=CL:0000791!3.02e-13!9;CL:0000789!3.02e-13!9;CL:0002420!3.02e-13!9;CL:0002419!3.02e-13!9;CL:0000790!3.02e-13!9;CL:0000624!9.38e-12!8;CL:0000838!1.33e-11!12;CL:0000542!1.69e-10!13;CL:0000051!1.69e-10!13;CL:0000084!2.12e-10!11;CL:0000827!2.12e-10!11;CL:0000893!5.40e-09!6;CL:0002489!5.40e-09!6;CL:0000898!5.40e-09!6;CL:0000809!5.40e-09!6;CL:0000810!5.40e-09!6;CL:0000895!5.40e-09!6;CL:0000808!5.40e-09!6;CL:0000894!5.40e-09!6;CL:0000806!5.40e-09!6;CL:0000807!5.40e-09!6;CL:0000805!5.40e-09!6;CL:0002425!5.40e-09!6;CL:0002436!5.40e-09!6;CL:0002427!5.40e-09!6;CL:0002428!5.40e-09!6;CL:0002429!5.40e-09!6;CL:0002433!5.40e-09!6;CL:0002431!5.40e-09!6;CL:0002432!5.40e-09!6;CL:0002031!8.32e-09!25;CL:0000738!2.09e-07!17;CL:0002087!2.09e-07!17|ontology_enrichment_celltype_v019_2=CL:0000791,8.18e-15,9;CL:0000789,8.18e-15,9;CL:0002420,8.18e-15,9;CL:0002419,8.18e-15,9;CL:0000790,8.18e-15,9;CL:0000084,4.20e-12,11;CL:0000827,4.20e-12,11;CL:0000838,4.39e-11,12;CL:0000624,7.32e-11,8;CL:0000542,3.20e-10,13;CL:0000051,3.20e-10,13;CL:0000738,8.86e-08,17;CL:0002087,8.86e-08,17;CL:0000625,7.38e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!8.19e-24!23;UBERON:0000974!8.19e-24!23;UBERON:0004807!8.19e-24!23;UBERON:0005058!8.19e-24!23;UBERON:0003351!8.19e-24!23;UBERON:0009113!8.19e-24!23;UBERON:0003295!8.19e-24!23;UBERON:0009722!8.19e-24!23;UBERON:0005562!8.19e-24!23;UBERON:0007690!8.19e-24!23;UBERON:0006562!1.54e-22!24;UBERON:0003408!1.54e-22!24;UBERON:0001557!1.54e-22!24;UBERON:0001042!1.54e-22!24;UBERON:0008814!1.54e-22!24;UBERON:0009145!1.54e-22!24;UBERON:0000072!1.76e-21!27;UBERON:0004177!3.03e-19!29;UBERON:0000065!1.54e-18!41;UBERON:0001004!6.68e-18!42;UBERON:0002193!1.77e-16!48;UBERON:0002390!2.98e-15!45;UBERON:0003061!2.98e-15!45;UBERON:0000063!5.34e-15!35;UBERON:0002405!2.01e-11!70;UBERON:0005057!4.28e-11!51;UBERON:0005911!1.93e-09!69;UBERON:0001041!3.51e-09!92;UBERON:0000077!5.28e-09!97;UBERON:0003929!7.03e-09!55;UBERON:0002368!1.33e-07!60;UBERON:0003081!1.91e-07!88;UBERON:0000949!2.30e-07!72;UBERON:0000490!3.74e-07!66;UBERON:0000064!9.38e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.45e-42,23;UBERON:0000974,1.45e-42,23;UBERON:0004807,1.45e-42,23;UBERON:0005058,1.45e-42,23;UBERON:0003351,1.45e-42,23;UBERON:0009113,1.45e-42,23;UBERON:0003295,1.45e-42,23;UBERON:0009722,1.45e-42,23;UBERON:0005562,1.45e-42,23;UBERON:0007690,1.45e-42,23;UBERON:0006562,1.01e-40,24;UBERON:0003408,1.01e-40,24;UBERON:0001557,1.01e-40,24;UBERON:0001042,1.01e-40,24;UBERON:0008814,1.01e-40,24;UBERON:0009145,1.01e-40,24;UBERON:0000072,5.24e-36,27;UBERON:0004177,2.10e-33,29;UBERON:0005057,2.10e-33,29;UBERON:0000077,2.24e-27,35;UBERON:0007811,1.45e-26,36;UBERON:0000065,4.18e-23,41;UBERON:0001004,1.64e-22,42;UBERON:0000153,6.04e-22,43;UBERON:0002390,6.89e-21,45;UBERON:0003061,6.89e-21,45;UBERON:0002193,1.82e-19,48;UBERON:0002405,1.82e-19,48;UBERON:0003929,9.48e-17,55;UBERON:0002368,3.40e-15,60;UBERON:0002530,7.07e-14,65;UBERON:0000490,1.23e-13,66;UBERON:0005911,5.85e-13,69;UBERON:0000949,2.45e-12,72;UBERON:0001041,6.64e-11,80;UBERON:0003081,7.27e-10,87;UBERON:0004921,4.89e-07,114;UBERON:0001007,7.03e-07,116;UBERON:0001555,7.03e-07,116;UBERON:0007026,7.03e-07,116;UBERON:0004119,9.99e-07,118;UBERON:0000925,9.99e-07,118;UBERON:0006595,9.99e-07,118|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.281577444303333,0.468129052643987,0.68487187290202,0.558405112967355,2.73921167889929,2.18551006047494,0,0,0.699561878128147,0.473193248037357,0.274228867211478,0.42438965179803,0.0850432901510698,0,0,0.319984845586813,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,1.45072428402269,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0.505524445014783,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556094498451196,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.485561272309963,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,3.47612232690996,0.405450430580328,1.02710957164827,1.16928740680016,1.25318686967237,1.19208812868759,1.44234539423963,0.738447635872886,1.51449674922221,1.98137697303,1.71404514732629,2.33898913775406,1.6356013078856,3.85693777199178,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0.441182838239031,0|short_description=p15@Arhgef1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16801 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=D3YVJ9 | |||
|association_with_transcript=-14bp_to_ENSMUST00000151121_5end | |||
|cluster_id=chr7:25692637..25692651,+ | |||
|description=CAGE_peak_15_at_Arhgef1_5end | |||
|id=chr7:25692637..25692651,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.02e-13!9;CL:0000789!3.02e-13!9;CL:0002420!3.02e-13!9;CL:0002419!3.02e-13!9;CL:0000790!3.02e-13!9;CL:0000624!9.38e-12!8;CL:0000838!1.33e-11!12;CL:0000542!1.69e-10!13;CL:0000051!1.69e-10!13;CL:0000084!2.12e-10!11;CL:0000827!2.12e-10!11;CL:0000893!5.40e-09!6;CL:0002489!5.40e-09!6;CL:0000898!5.40e-09!6;CL:0000809!5.40e-09!6;CL:0000810!5.40e-09!6;CL:0000895!5.40e-09!6;CL:0000808!5.40e-09!6;CL:0000894!5.40e-09!6;CL:0000806!5.40e-09!6;CL:0000807!5.40e-09!6;CL:0000805!5.40e-09!6;CL:0002425!5.40e-09!6;CL:0002436!5.40e-09!6;CL:0002427!5.40e-09!6;CL:0002428!5.40e-09!6;CL:0002429!5.40e-09!6;CL:0002433!5.40e-09!6;CL:0002431!5.40e-09!6;CL:0002432!5.40e-09!6;CL:0002031!8.32e-09!25;CL:0000738!2.09e-07!17;CL:0002087!2.09e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.18e-15,9;CL:0000789,8.18e-15,9;CL:0002420,8.18e-15,9;CL:0002419,8.18e-15,9;CL:0000790,8.18e-15,9;CL:0000084,4.20e-12,11;CL:0000827,4.20e-12,11;CL:0000838,4.39e-11,12;CL:0000624,7.32e-11,8;CL:0000542,3.20e-10,13;CL:0000051,3.20e-10,13;CL:0000738,8.86e-08,17;CL:0002087,8.86e-08,17;CL:0000625,7.38e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!8.19e-24!23;UBERON:0000974!8.19e-24!23;UBERON:0004807!8.19e-24!23;UBERON:0005058!8.19e-24!23;UBERON:0003351!8.19e-24!23;UBERON:0009113!8.19e-24!23;UBERON:0003295!8.19e-24!23;UBERON:0009722!8.19e-24!23;UBERON:0005562!8.19e-24!23;UBERON:0007690!8.19e-24!23;UBERON:0006562!1.54e-22!24;UBERON:0003408!1.54e-22!24;UBERON:0001557!1.54e-22!24;UBERON:0001042!1.54e-22!24;UBERON:0008814!1.54e-22!24;UBERON:0009145!1.54e-22!24;UBERON:0000072!1.76e-21!27;UBERON:0004177!3.03e-19!29;UBERON:0000065!1.54e-18!41;UBERON:0001004!6.68e-18!42;UBERON:0002193!1.77e-16!48;UBERON:0002390!2.98e-15!45;UBERON:0003061!2.98e-15!45;UBERON:0000063!5.34e-15!35;UBERON:0002405!2.01e-11!70;UBERON:0005057!4.28e-11!51;UBERON:0005911!1.93e-09!69;UBERON:0001041!3.51e-09!92;UBERON:0000077!5.28e-09!97;UBERON:0003929!7.03e-09!55;UBERON:0002368!1.33e-07!60;UBERON:0003081!1.91e-07!88;UBERON:0000949!2.30e-07!72;UBERON:0000490!3.74e-07!66;UBERON:0000064!9.38e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.45e-42,23;UBERON:0000974,1.45e-42,23;UBERON:0004807,1.45e-42,23;UBERON:0005058,1.45e-42,23;UBERON:0003351,1.45e-42,23;UBERON:0009113,1.45e-42,23;UBERON:0003295,1.45e-42,23;UBERON:0009722,1.45e-42,23;UBERON:0005562,1.45e-42,23;UBERON:0007690,1.45e-42,23;UBERON:0006562,1.01e-40,24;UBERON:0003408,1.01e-40,24;UBERON:0001557,1.01e-40,24;UBERON:0001042,1.01e-40,24;UBERON:0008814,1.01e-40,24;UBERON:0009145,1.01e-40,24;UBERON:0000072,5.24e-36,27;UBERON:0004177,2.10e-33,29;UBERON:0005057,2.10e-33,29;UBERON:0000077,2.24e-27,35;UBERON:0007811,1.45e-26,36;UBERON:0000065,4.18e-23,41;UBERON:0001004,1.64e-22,42;UBERON:0000153,6.04e-22,43;UBERON:0002390,6.89e-21,45;UBERON:0003061,6.89e-21,45;UBERON:0002193,1.82e-19,48;UBERON:0002405,1.82e-19,48;UBERON:0003929,9.48e-17,55;UBERON:0002368,3.40e-15,60;UBERON:0002530,7.07e-14,65;UBERON:0000490,1.23e-13,66;UBERON:0005911,5.85e-13,69;UBERON:0000949,2.45e-12,72;UBERON:0001041,6.64e-11,80;UBERON:0003081,7.27e-10,87;UBERON:0004921,4.89e-07,114;UBERON:0001007,7.03e-07,116;UBERON:0001555,7.03e-07,116;UBERON:0007026,7.03e-07,116;UBERON:0004119,9.99e-07,118;UBERON:0000925,9.99e-07,118;UBERON:0006595,9.99e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.281577444303333,0.468129052643987,0.68487187290202,0.558405112967355,2.73921167889929,2.18551006047494,0,0,0.699561878128147,0.473193248037357,0.274228867211478,0.42438965179803,0.0850432901510698,0,0,0.319984845586813,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,1.45072428402269,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0.505524445014783,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556094498451196,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.485561272309963,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,3.47612232690996,0.405450430580328,1.02710957164827,1.16928740680016,1.25318686967237,1.19208812868759,1.44234539423963,0.738447635872886,1.51449674922221,1.98137697303,1.71404514732629,2.33898913775406,1.6356013078856,3.85693777199178,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p15@Arhgef1 | |||
}} |
Latest revision as of 09:59, 26 September 2015
Short description: | p15@Arhgef1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Arhgef1_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -14bp_to_ENSMUST00000151121_5end |
EntrezGene: | Arhgef1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.18e-15 | 9 |
alpha-beta T cell | 8.18e-15 | 9 |
immature T cell | 8.18e-15 | 9 |
mature T cell | 8.18e-15 | 9 |
immature alpha-beta T cell | 8.18e-15 | 9 |
T cell | 4.20e-12 | 11 |
pro-T cell | 4.20e-12 | 11 |
lymphoid lineage restricted progenitor cell | 4.39e-11 | 12 |
CD4-positive, alpha-beta T cell | 7.32e-11 | 8 |
lymphocyte | 3.20e-10 | 13 |
common lymphoid progenitor | 3.20e-10 | 13 |
leukocyte | 8.86e-08 | 17 |
nongranular leukocyte | 8.86e-08 | 17 |
CD8-positive, alpha-beta T cell | 7.38e-07 | 1 |