FFCP PHASE1:Mm9::chr7:96780993..96781002,+: Difference between revisions
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{{FFCP|EntrezGene=109264|HGNC=|MCL_coexpression_id=311|UniProt=Q3UZW5|association_with_transcript=-12bp_to_uc009igc.1_5end|description=CAGE_peak_12_at_Me3_5end|id=chr7:96780993..96781002,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,1.53e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!7.78e-11!63;UBERON:0001049!3.24e-09!52;UBERON:0005068!3.24e-09!52;UBERON:0006241!3.24e-09!52;UBERON:0007135!3.24e-09!52;UBERON:0000955!3.87e-09!50;UBERON:0006238!3.87e-09!50;UBERON:0001017!4.88e-09!73;UBERON:0005743!4.88e-09!73;UBERON:0000073!5.27e-09!75;UBERON:0001016!5.27e-09!75;UBERON:0002616!1.65e-08!49;UBERON:0004121!1.65e-08!102;UBERON:0000924!1.65e-08!102;UBERON:0006601!1.65e-08!102;UBERON:0002298!6.09e-07!6;UBERON:0002346!8.65e-07!71;UBERON:0003075!8.65e-07!71;UBERON:0007284!8.65e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.04e-11,92;UBERON:0007100,6.12e-10,18;UBERON:0000948,6.12e-10,18;UBERON:0005498,6.12e-10,18;UBERON:0004140,6.12e-10,18;UBERON:0009881,6.12e-10,18;UBERON:0004141,6.12e-10,18;UBERON:0003084,6.12e-10,18;UBERON:0007005,6.12e-10,18;UBERON:0004139,6.12e-10,18;UBERON:0004291,6.12e-10,18;UBERON:0004111,3.04e-08,122;UBERON:0004733,6.36e-08,6;UBERON:0004732,6.36e-08,6;UBERON:0002028,6.36e-08,6;UBERON:0007277,6.36e-08,6;UBERON:0000025,1.07e-07,114;UBERON:0004535,1.13e-07,23;UBERON:0001009,1.13e-07,23;UBERON:0002038,1.53e-07,3;UBERON:0009663,1.53e-07,3;UBERON:0009661,1.53e-07,3;UBERON:0000125,1.53e-07,3;UBERON:0002308,1.53e-07,3;UBERON:0003076,9.30e-07,12;UBERON:0003057,9.30e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.659058548203415,0.388859798148567,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0.883474163806454,0,0,0,0,0.510749352340751,0.614426133024974,0,0,0,1.3959149950069,1.68828783009504,0.763991238884051,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.842666520790511,0.170430322578058,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0.722996784599558,0,0.161766849947409,1.10420759230197,0,0,1.17112318804619,1.8850203613211,0,0,0,0,0.898743836428936,0.457500602818626,0,1.04294592115366,0.255715457330331,0.62336413367868,0.973447578406546,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.340182495756639,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.583826711835847,1.31647879930784,1.80584210487005,2.75633952455909,2.19299981137998,1.75640092232841,1.74468344388483,0.630869845692382,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0,0,0.49095073923223,0.505892296994058,0.738050739898011,0.941992367048249,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.327726629431476,0,0,0,0,0,0,1.12385412991454,0.820481806145422,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0.963963949265421,0.425820255624806,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0,0.608929898229199,0,0.21183207086382,0,0.32977250588296,0,0.0603129249281559,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58711268530648,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0.920650473014354,0,1.71853182343688,0.685082519770642,0.755393897389701,1.35004500046361,0,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0.64183841918363,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0.463735671240843|short_description=p12@Me3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109264 | |||
|HGNC= | |||
|MCL_coexpression_id=311 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UZW5 | |||
|association_with_transcript=-12bp_to_uc009igc.1_5end | |||
|cluster_id=chr7:96780993..96781002,+ | |||
|description=CAGE_peak_12_at_Me3_5end | |||
|id=chr7:96780993..96781002,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.53e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.78e-11!63;UBERON:0001049!3.24e-09!52;UBERON:0005068!3.24e-09!52;UBERON:0006241!3.24e-09!52;UBERON:0007135!3.24e-09!52;UBERON:0000955!3.87e-09!50;UBERON:0006238!3.87e-09!50;UBERON:0001017!4.88e-09!73;UBERON:0005743!4.88e-09!73;UBERON:0000073!5.27e-09!75;UBERON:0001016!5.27e-09!75;UBERON:0002616!1.65e-08!49;UBERON:0004121!1.65e-08!102;UBERON:0000924!1.65e-08!102;UBERON:0006601!1.65e-08!102;UBERON:0002298!6.09e-07!6;UBERON:0002346!8.65e-07!71;UBERON:0003075!8.65e-07!71;UBERON:0007284!8.65e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.04e-11,92;UBERON:0007100,6.12e-10,18;UBERON:0000948,6.12e-10,18;UBERON:0005498,6.12e-10,18;UBERON:0004140,6.12e-10,18;UBERON:0009881,6.12e-10,18;UBERON:0004141,6.12e-10,18;UBERON:0003084,6.12e-10,18;UBERON:0007005,6.12e-10,18;UBERON:0004139,6.12e-10,18;UBERON:0004291,6.12e-10,18;UBERON:0004111,3.04e-08,122;UBERON:0004733,6.36e-08,6;UBERON:0004732,6.36e-08,6;UBERON:0002028,6.36e-08,6;UBERON:0007277,6.36e-08,6;UBERON:0000025,1.07e-07,114;UBERON:0004535,1.13e-07,23;UBERON:0001009,1.13e-07,23;UBERON:0002038,1.53e-07,3;UBERON:0009663,1.53e-07,3;UBERON:0009661,1.53e-07,3;UBERON:0000125,1.53e-07,3;UBERON:0002308,1.53e-07,3;UBERON:0003076,9.30e-07,12;UBERON:0003057,9.30e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.659058548203415,0.388859798148567,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0.883474163806454,0,0,0,0,0.510749352340751,0.614426133024974,0,0,0,1.3959149950069,1.68828783009504,0.763991238884051,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.842666520790511,0.170430322578058,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0.722996784599558,0,0.161766849947409,1.10420759230197,0,0,1.17112318804619,1.8850203613211,0,0,0,0,0.898743836428936,0.457500602818626,0,1.04294592115366,0.255715457330331,0.62336413367868,0.973447578406546,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.340182495756639,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.583826711835847,1.31647879930784,1.80584210487005,2.75633952455909,2.19299981137998,1.75640092232841,1.74468344388483,0.630869845692382,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0,0,0.49095073923223,0.505892296994058,0.738050739898011,0.941992367048249,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.327726629431476,0,0,0,0,0,0,1.12385412991454,0.820481806145422,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0.963963949265421,0.425820255624806,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0,0.608929898229199,0,0.21183207086382,0,0.32977250588296,0,0.0603129249281559,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58711268530648,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0.920650473014354,0,1.71853182343688,0.685082519770642,0.755393897389701,1.35004500046361,0,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0.64183841918363,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0,0.463735671240843 | |||
|short_description=p12@Me3 | |||
}} |
Latest revision as of 05:23, 27 September 2015
Short description: | p12@Me3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Me3_5end |
Coexpression cluster: | MCL_coexpression_mm9:311 |
Association with transcript: | -12bp_to_uc009igc.1_5end |
EntrezGene: | Me3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.53e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.04e-11 | 92 |
primary circulatory organ | 6.12e-10 | 18 |
heart | 6.12e-10 | 18 |
primitive heart tube | 6.12e-10 | 18 |
primary heart field | 6.12e-10 | 18 |
anterior lateral plate mesoderm | 6.12e-10 | 18 |
heart tube | 6.12e-10 | 18 |
heart primordium | 6.12e-10 | 18 |
cardiac mesoderm | 6.12e-10 | 18 |
cardiogenic plate | 6.12e-10 | 18 |
heart rudiment | 6.12e-10 | 18 |
anatomical conduit | 3.04e-08 | 122 |
segmental subdivision of hindbrain | 6.36e-08 | 6 |
segmental subdivision of nervous system | 6.36e-08 | 6 |
hindbrain | 6.36e-08 | 6 |
presumptive hindbrain | 6.36e-08 | 6 |
tube | 1.07e-07 | 114 |
cardiovascular system | 1.13e-07 | 23 |
circulatory system | 1.13e-07 | 23 |
substantia nigra | 1.53e-07 | 3 |
telencephalic nucleus | 1.53e-07 | 3 |
midbrain nucleus | 1.53e-07 | 3 |
neural nucleus | 1.53e-07 | 3 |
nucleus of brain | 1.53e-07 | 3 |
posterior neural tube | 9.30e-07 | 12 |
chordal neural plate | 9.30e-07 | 12 |