FFCP PHASE1:Mm9::chr8:47825166..47825178,+: Difference between revisions
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{{FFCP|EntrezGene=16363|HGNC=|MCL_coexpression_id=18|UniProt=P23906,Q3U2Z2|association_with_transcript=67bp_to_ENSMUST00000034041,NM_008391,uc009lqo.2,uc012gdl.1_5end|description=CAGE_peak_2_at_Irf2_5end|id=chr8:47825166..47825178,+|ontology_enrichment_celltype=CL:0002031!3.51e-09!25;CL:0000988!3.78e-09!32;CL:0002032!3.78e-09!32;CL:0000037!3.78e-09!32;CL:0000566!3.78e-09!32;CL:0000837!3.78e-09!32;CL:0000063!7.88e-08!66;CL:0000838!8.99e-08!12;CL:0002320!1.32e-07!46;CL:0000134!1.32e-07!46;CL:0000738!1.63e-07!17;CL:0002087!1.63e-07!17;CL:0000084!4.31e-07!11;CL:0000827!4.31e-07!11|ontology_enrichment_celltype_v019_2=CL:0002031,6.89e-12,25;CL:0000988,2.40e-11,32;CL:0002032,2.40e-11,32;CL:0000037,2.40e-11,32;CL:0000837,2.40e-11,32;CL:0000738,2.76e-10,17;CL:0002087,2.76e-10,17;CL:0000838,3.03e-10,12;CL:0002320,3.27e-10,46;CL:0000134,3.27e-10,46;CL:0000084,2.69e-09,11;CL:0000827,2.69e-09,11;CL:0000542,4.19e-09,13;CL:0000051,4.19e-09,13;CL:0000791,6.31e-08,9;CL:0000789,6.31e-08,9;CL:0002420,6.31e-08,9;CL:0002419,6.31e-08,9;CL:0000790,6.31e-08,9;CL:0000219,3.43e-07,54;CL:0000624,4.11e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.53e-13!48;UBERON:0002405!1.58e-12!70;UBERON:0002390!5.87e-12!45;UBERON:0003061!5.87e-12!45;UBERON:0001007!6.02e-10!128;UBERON:0001555!6.02e-10!128;UBERON:0007026!6.02e-10!128;UBERON:0005911!7.21e-10!69;UBERON:0004119!7.41e-10!130;UBERON:0000925!7.41e-10!130;UBERON:0006595!7.41e-10!130;UBERON:0003081!1.18e-09!88;UBERON:0004921!3.23e-09!126;UBERON:0004185!3.23e-09!126;UBERON:0004923!9.38e-08!24;UBERON:0002384!1.32e-07!46;UBERON:0000344!3.23e-07!15;UBERON:0003929!4.16e-07!55;UBERON:0004177!9.29e-07!29;UBERON:0000490!9.36e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0001007,3.57e-16,116;UBERON:0001555,3.57e-16,116;UBERON:0007026,3.57e-16,116;UBERON:0002193,1.06e-15,48;UBERON:0002405,1.06e-15,48;UBERON:0004119,1.67e-15,118;UBERON:0000925,1.67e-15,118;UBERON:0006595,1.67e-15,118;UBERON:0004921,4.84e-15,114;UBERON:0002390,1.32e-13,45;UBERON:0003061,1.32e-13,45;UBERON:0005911,5.40e-12,69;UBERON:0002384,3.27e-10,46;UBERON:0000344,1.80e-09,15;UBERON:0001004,1.63e-08,42;UBERON:0003929,2.02e-08,55;UBERON:0004923,2.26e-08,24;UBERON:0000065,2.46e-08,41;UBERON:0001242,3.39e-08,13;UBERON:0001262,3.39e-08,13;UBERON:0004786,3.39e-08,13;UBERON:0004177,3.64e-08,29;UBERON:0005057,3.64e-08,29;UBERON:0000160,5.44e-08,31;UBERON:0000077,8.78e-08,35;UBERON:0003081,1.91e-07,87;UBERON:0001041,2.43e-07,80;UBERON:0000490,3.63e-07,66;UBERON:0003408,5.69e-07,24;UBERON:0005409,6.90e-07,47;UBERON:0002370,8.23e-07,23;UBERON:0000974,8.23e-07,23;UBERON:0004807,8.23e-07,23;UBERON:0005058,8.23e-07,23;UBERON:0003351,8.23e-07,23;UBERON:0009113,8.23e-07,23;UBERON:0003295,8.23e-07,23;UBERON:0009722,8.23e-07,23;UBERON:0005562,8.23e-07,23;UBERON:0007690,8.23e-07,23|phase1_expression=0,3.14077866875425,8.18998630901165,4.23449895829562,4.00716583957078,1.84667199103079,2.80335168714631,11.879345756625,4.22366166455,4.44722600011788,2.05461561870606,2.6324812468461,6.84802919724823,9.00430144915673,5.3297561890506,4.656931149966,0.699561878128147,21.7668894097184,25.2290557834559,18.6731446791133,1.44573593256819,4.17021995043718,4.17919662622297,4.95976510659561,2.98232065387321,1.72269589234506,2.15380998079537,3.66301095566011,3.23039813075836,5.04060259519861,2.21730510655305,0.635030673459631,0,0,2.02196133825892,1.49611180822643,1.22501613757421,0.837063261473815,3.1253413780952,1.0470474879476,0.588231488031014,1.36609096991689,1.45653105909346,1.1330713617802,0.811015449756117,1.10128051297009,0,0.218025156380447,0,0.388859798148567,0.55994568650145,0,20.4694779390438,5.07753499407941,5.37750078627942,0.257259436035947,0.85960031981627,0.515672092277442,0,0,0,0.677689064138264,0,1.3498495759221,6.92206453796882,4.9733608046227,0.299600110518405,2.68952813725088,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0.151452386666368,0.302286240427142,7.53647670624362,0.860423876981386,0,1.61910957491345,0,3.58421509677868,1.54488862144927,0,0.259786004602869,0,0,1.28326477414318,0,0,0.216491041011214,0,0,2.8545969929765,38.3228067797814,1.7813056687779,0.173485326766136,0.608930956624282,0.691846491768175,0,0.470354828542819,1.0053327306374,0.741584903203122,3.03658649531814,2.65383165584962,0,2.20841518460394,3.39412677194655,0,0.585561594023094,0.209446706813455,4.59822699375465,4.07371423320129,1.19980546198682,1.90605340609597,0.149790639404823,0,0,0.173824320192276,0.767146371990992,0,0.162241263067758,0.203678727700633,2.48813941220186,0.758168275301024,0.841767423545896,0,0.229902104433473,0.180062129805349,0.60281927134286,0.476255494059295,0.2562274405697,0.468508622798644,0,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0.696504333044333,0,0.199034266818493,0.702213187313235,2.57347907114715,0.568326998791185,0.207125772535502,0.234526059981096,0.36012412292203,0,0.5902926952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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16363 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=P23906,Q3U2Z2 | |||
|association_with_transcript=67bp_to_ENSMUST00000034041,NM_008391,uc009lqo.2,uc012gdl.1_5end | |||
|cluster_id=chr8:47825166..47825178,+ | |||
|description=CAGE_peak_2_at_Irf2_5end | |||
|id=chr8:47825166..47825178,+ | |||
|ontology_enrichment_celltype=CL:0002031!3.51e-09!25;CL:0000988!3.78e-09!32;CL:0002032!3.78e-09!32;CL:0000037!3.78e-09!32;CL:0000566!3.78e-09!32;CL:0000837!3.78e-09!32;CL:0000063!7.88e-08!66;CL:0000838!8.99e-08!12;CL:0002320!1.32e-07!46;CL:0000134!1.32e-07!46;CL:0000738!1.63e-07!17;CL:0002087!1.63e-07!17;CL:0000084!4.31e-07!11;CL:0000827!4.31e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,6.89e-12,25;CL:0000988,2.40e-11,32;CL:0002032,2.40e-11,32;CL:0000037,2.40e-11,32;CL:0000837,2.40e-11,32;CL:0000738,2.76e-10,17;CL:0002087,2.76e-10,17;CL:0000838,3.03e-10,12;CL:0002320,3.27e-10,46;CL:0000134,3.27e-10,46;CL:0000084,2.69e-09,11;CL:0000827,2.69e-09,11;CL:0000542,4.19e-09,13;CL:0000051,4.19e-09,13;CL:0000791,6.31e-08,9;CL:0000789,6.31e-08,9;CL:0002420,6.31e-08,9;CL:0002419,6.31e-08,9;CL:0000790,6.31e-08,9;CL:0000219,3.43e-07,54;CL:0000624,4.11e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.53e-13!48;UBERON:0002405!1.58e-12!70;UBERON:0002390!5.87e-12!45;UBERON:0003061!5.87e-12!45;UBERON:0001007!6.02e-10!128;UBERON:0001555!6.02e-10!128;UBERON:0007026!6.02e-10!128;UBERON:0005911!7.21e-10!69;UBERON:0004119!7.41e-10!130;UBERON:0000925!7.41e-10!130;UBERON:0006595!7.41e-10!130;UBERON:0003081!1.18e-09!88;UBERON:0004921!3.23e-09!126;UBERON:0004185!3.23e-09!126;UBERON:0004923!9.38e-08!24;UBERON:0002384!1.32e-07!46;UBERON:0000344!3.23e-07!15;UBERON:0003929!4.16e-07!55;UBERON:0004177!9.29e-07!29;UBERON:0000490!9.36e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,3.57e-16,116;UBERON:0001555,3.57e-16,116;UBERON:0007026,3.57e-16,116;UBERON:0002193,1.06e-15,48;UBERON:0002405,1.06e-15,48;UBERON:0004119,1.67e-15,118;UBERON:0000925,1.67e-15,118;UBERON:0006595,1.67e-15,118;UBERON:0004921,4.84e-15,114;UBERON:0002390,1.32e-13,45;UBERON:0003061,1.32e-13,45;UBERON:0005911,5.40e-12,69;UBERON:0002384,3.27e-10,46;UBERON:0000344,1.80e-09,15;UBERON:0001004,1.63e-08,42;UBERON:0003929,2.02e-08,55;UBERON:0004923,2.26e-08,24;UBERON:0000065,2.46e-08,41;UBERON:0001242,3.39e-08,13;UBERON:0001262,3.39e-08,13;UBERON:0004786,3.39e-08,13;UBERON:0004177,3.64e-08,29;UBERON:0005057,3.64e-08,29;UBERON:0000160,5.44e-08,31;UBERON:0000077,8.78e-08,35;UBERON:0003081,1.91e-07,87;UBERON:0001041,2.43e-07,80;UBERON:0000490,3.63e-07,66;UBERON:0003408,5.69e-07,24;UBERON:0005409,6.90e-07,47;UBERON:0002370,8.23e-07,23;UBERON:0000974,8.23e-07,23;UBERON:0004807,8.23e-07,23;UBERON:0005058,8.23e-07,23;UBERON:0003351,8.23e-07,23;UBERON:0009113,8.23e-07,23;UBERON:0003295,8.23e-07,23;UBERON:0009722,8.23e-07,23;UBERON:0005562,8.23e-07,23;UBERON:0007690,8.23e-07,23 | |||
|phase1_expression=0,3.14077866875425,8.18998630901165,4.23449895829562,4.00716583957078,1.84667199103079,2.80335168714631,11.879345756625,4.22366166455,4.44722600011788,2.05461561870606,2.6324812468461,6.84802919724823,9.00430144915673,5.3297561890506,4.656931149966,0.699561878128147,21.7668894097184,25.2290557834559,18.6731446791133,1.44573593256819,4.17021995043718,4.17919662622297,4.95976510659561,2.98232065387321,1.72269589234506,2.15380998079537,3.66301095566011,3.23039813075836,5.04060259519861,2.21730510655305,0.635030673459631,0,0,2.02196133825892,1.49611180822643,1.22501613757421,0.837063261473815,3.1253413780952,1.0470474879476,0.588231488031014,1.36609096991689,1.45653105909346,1.1330713617802,0.811015449756117,1.10128051297009,0,0.218025156380447,0,0.388859798148567,0.55994568650145,0,20.4694779390438,5.07753499407941,5.37750078627942,0.257259436035947,0.85960031981627,0.515672092277442,0,0,0,0.677689064138264,0,1.3498495759221,6.92206453796882,4.9733608046227,0.299600110518405,2.68952813725088,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0.151452386666368,0.302286240427142,7.53647670624362,0.860423876981386,0,1.61910957491345,0,3.58421509677868,1.54488862144927,0,0.259786004602869,0,0,1.28326477414318,0,0,0.216491041011214,0,0,2.8545969929765,38.3228067797814,1.7813056687779,0.173485326766136,0.608930956624282,0.691846491768175,0,0.470354828542819,1.0053327306374,0.741584903203122,3.03658649531814,2.65383165584962,0,2.20841518460394,3.39412677194655,0,0.585561594023094,0.209446706813455,4.59822699375465,4.07371423320129,1.19980546198682,1.90605340609597,0.149790639404823,0,0,0.173824320192276,0.767146371990992,0,0.162241263067758,0.203678727700633,2.48813941220186,0.758168275301024,0.841767423545896,0,0.229902104433473,0.180062129805349,0.60281927134286,0.476255494059295,0.2562274405697,0.468508622798644,0,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0.696504333044333,0,0.199034266818493,0.702213187313235,2.57347907114715,0.568326998791185,0.207125772535502,0.234526059981096,0.36012412292203,0,0.590292695242212,0.308534225774757,0.465067889500816,0.536546802799238,0.233530684734339,0.822799249567402,1.47750717671186,1.05389452409612,1.02339991197733,2.63460138349261,1.74468344388483,0.210289948564127,0.102904612379284,11.5646574044329,1.85115396664481,0,0.232236671860439,0.38660238396628,0,0.667134131534611,0.951128130562796,3.32170343081158,0.988193728344065,1.75934646160189,2.78539060857611,2.53453313254856,3.59527763461689,4.53889904736858,3.58454291857861,0.189667900953082,0.228497025219458,0,0.203651327845314,0.775809948670503,0.350679099451593,0.505892296994058,0.590440591918409,1.255989822731,0.987177311374404,1.48226313543574,0.166845105716094,0,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0.575392274901621,0.972811360650212,0.549122826376163,1.43768206527355,2.23284568601102,1.5601883655728,1.26289438973556,2.33216637578486,1.4473305640901,10.1614254591633,0,0.651859905768103,0.169745085775188,0.469380496577004,2.1775813467436,3.80869825417622,1.95133647857799,2.36452716159286,3.10050565508285,3.6674596791222,7.04612253277673,6.04397436530635,5.06271705035291,6.03165135757089,8.70249094109935,1.47529281905711,1.93155722413313,0.160550589987792,0.586058432961016,0.327869890753351,0.757412781613119,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0,0.395287777946524,0.321321316421807,0.851640511249612,0.35613120733451,0.651547837414304,1.15479086080775,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0.727067458955011,0,0.316036757935816,0,0,1.36175842301515,0,0.129358683782755,0.857348140126369,0,0.178368817602071,0,0.304464949114599,0.938686832254841,0.21183207086382,0,1.48397627647332,0.645857706783622,0.241251699712623,0.358117032009409,0,2.33184669303881,0.370850604021019,4.78438466233988,0.206386867963223,0.740778109478847,2.63715839806567,5.05768642567793,8.00723606222829,3.22959016988325,3.91864066506242,2.9021994498929,0,0,0.813277868507395,0.432021363287205,0.209088296014469,0,0.944050424693745,0.991841468704031,1.57053565190418,3.11075935900303,1.24267862617385,0,0,0.165458490457098,0.194451188344048,0,0.337912250981556,0.469428954583016,0.2604087696879,0.209718688851422,0.241584120826006,0,3.16011120628178,0.608175645870493,1.33524244314275,1.68897069871134,1.9692936523423,1.58945083825012,2.40390899039938,1.62458479892035,1.9183625490148,0.914481679859998,1.61321896218945,2.33898913775406,2.30908419936791,2.22066114144981,0.680191150845634,0,0.179427713218951,0,1.35232715822533,0.93841237725591,1.46521299413812,1.2862102744744,0,0,0,0,0.515559547031063,0.685082519770642,0,0.675022500231806,0,0.906284817968409,0.51776031175182,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.565879024158229,0.561849044819294,0.320125762024346,0.45948375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| |||
|short_description=p2@Irf2 | |||
}} |
Latest revision as of 14:38, 25 September 2015
Short description: | p2@Irf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Irf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 67bp_to_ENSMUST00000034041, NM_008391, uc009lqo.2, uc012gdl.1_5end |
EntrezGene: | Irf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 6.89e-12 | 25 |
hematopoietic cell | 2.40e-11 | 32 |
hematopoietic oligopotent progenitor cell | 2.40e-11 | 32 |
hematopoietic stem cell | 2.40e-11 | 32 |
hematopoietic multipotent progenitor cell | 2.40e-11 | 32 |
leukocyte | 2.76e-10 | 17 |
nongranular leukocyte | 2.76e-10 | 17 |
lymphoid lineage restricted progenitor cell | 3.03e-10 | 12 |
connective tissue cell | 3.27e-10 | 46 |
mesenchymal cell | 3.27e-10 | 46 |
T cell | 2.69e-09 | 11 |
pro-T cell | 2.69e-09 | 11 |
lymphocyte | 4.19e-09 | 13 |
common lymphoid progenitor | 4.19e-09 | 13 |
mature alpha-beta T cell | 6.31e-08 | 9 |
alpha-beta T cell | 6.31e-08 | 9 |
immature T cell | 6.31e-08 | 9 |
mature T cell | 6.31e-08 | 9 |
immature alpha-beta T cell | 6.31e-08 | 9 |
motile cell | 3.43e-07 | 54 |
CD4-positive, alpha-beta T cell | 4.11e-07 | 8 |