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FFCP PHASE1:Mm9::chr9:57493339..57493348,-: Difference between revisions

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{{FFCP|EntrezGene=12988|HGNC=|MCL_coexpression_id=521|UniProt=P41241|association_with_transcript=111bp_to_ENSMUST00000034863_5end|description=CAGE_peak_4_at_Csk_5end|id=chr9:57493339..57493348,-|ontology_enrichment_celltype=CL:0000988!1.31e-09!32;CL:0002032!1.31e-09!32;CL:0000037!1.31e-09!32;CL:0000566!1.31e-09!32;CL:0000837!1.31e-09!32;CL:0002031!3.68e-09!25;CL:0002320!5.03e-08!46;CL:0000134!5.03e-08!46;CL:0000738!2.17e-07!17;CL:0002087!2.17e-07!17|ontology_enrichment_celltype_v019_2=CL:0002031,2.72e-16,25;CL:0000988,2.65e-15,32;CL:0002032,2.65e-15,32;CL:0000037,2.65e-15,32;CL:0000837,2.65e-15,32;CL:0002320,1.79e-11,46;CL:0000134,1.79e-11,46;CL:0000738,1.86e-10,17;CL:0002087,1.86e-10,17;CL:0000838,3.06e-09,12;CL:0000034,8.65e-09,97;CL:0000219,1.18e-08,54;CL:0000839,2.39e-08,13;CL:0000542,2.54e-08,13;CL:0000051,2.54e-08,13;CL:0000049,2.92e-08,19;CL:0000084,4.77e-08,11;CL:0000827,4.77e-08,11;CL:0000723,1.08e-07,91;CL:0000048,1.08e-07,91;CL:0000763,2.26e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.15e-14!48;UBERON:0002390!2.72e-13!45;UBERON:0003061!2.72e-13!45;UBERON:0002405!7.38e-12!70;UBERON:0004177!6.09e-09!29;UBERON:0002384!5.03e-08!46;UBERON:0006562!1.10e-07!24;UBERON:0001557!1.10e-07!24;UBERON:0001042!1.10e-07!24;UBERON:0008814!1.10e-07!24;UBERON:0009145!1.10e-07!24;UBERON:0002370!2.16e-07!23;UBERON:0000974!2.16e-07!23;UBERON:0004807!2.16e-07!23;UBERON:0005058!2.16e-07!23;UBERON:0003351!2.16e-07!23;UBERON:0009113!2.16e-07!23;UBERON:0003295!2.16e-07!23;UBERON:0009722!2.16e-07!23;UBERON:0005562!2.16e-07!23;UBERON:0007690!2.16e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.70e-25,48;UBERON:0002405,6.70e-25,48;UBERON:0002390,2.66e-22,45;UBERON:0003061,2.66e-22,45;UBERON:0006562,2.89e-16,24;UBERON:0001557,2.89e-16,24;UBERON:0001042,2.89e-16,24;UBERON:0008814,2.89e-16,24;UBERON:0009145,2.89e-16,24;UBERON:0004177,7.91e-16,29;UBERON:0005057,7.91e-16,29;UBERON:0002370,1.08e-15,23;UBERON:0000974,1.08e-15,23;UBERON:0004807,1.08e-15,23;UBERON:0005058,1.08e-15,23;UBERON:0003351,1.08e-15,23;UBERON:0009113,1.08e-15,23;UBERON:0003295,1.08e-15,23;UBERON:0009722,1.08e-15,23;UBERON:0005562,1.08e-15,23;UBERON:0007690,1.08e-15,23;UBERON:0003408,8.72e-15,24;UBERON:0000072,9.44e-14,27;UBERON:0000077,6.32e-12,35;UBERON:0002384,1.79e-11,46;UBERON:0000065,7.64e-10,41;UBERON:0001004,1.88e-09,42;UBERON:0007811,8.19e-09,36;UBERON:0003081,1.10e-08,87;UBERON:0002371,3.10e-07,16;UBERON:0003929,3.67e-07,55|phase1_expression=0.320297694209588,0.348975407639361,0.909998478779072,0.90739263392049,1.00179145989269,0.16787927191189,0.467225281191051,3.74457637980571,2.67498572088167,1.17032263160997,0.34243593645101,1.27635454392538,1.54080656938085,3.58423649917889,1.66554880907831,1.41732687172878,0,2.99689057090326,3.15363197293199,4.2438965179803,0.425216450755349,3.27660138962921,2.08959831311148,1.59992422793407,1.14704640533585,0,0.430761996159075,0.646413698057667,0.190023419456374,0.756090389279792,0.443461021310609,1.90509202037889,1.84519436275371,0,0.288851619751275,0.332469290716985,0.408338712524738,1.25559489221072,1.5626706890476,0,1.76469446409304,2.73218193983378,0,0.503587271902309,0,0.550640256485045,0,0.65407546914134,0,0,0.279972843250725,0,4.02678254538567,0.725362142011344,3.6970317905671,0.771778308107841,0.286533439938757,0,0.606949382578793,1.5869729378161,1.26766280701236,0.338844532069132,0.889294796111139,1.3498495759221,0.988866362566974,2.1314403448383,0.599200221036809,1.53687322128622,0.311068836925433,0.135005938331691,0.210324961351382,0.285650984403804,0.883474163806454,0.122490799214954,0.191690942036473,0.919218786610021,0,0,0.153606533256243,0.263772575460388,0.274462930807229,1.04182674111352,0,0,0,0.294628585473668,0.427115042397309,0.372798891650601,0.302904773332736,0.377857800533928,0,0.860423876981386,1.3599426674155,0.539703191637817,0,0.448026887097336,0.280888840263504,0.340860645156116,0.259786004602869,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0.79928715803342,3.10725460376606,0.445326417194474,0.520455980298408,0,0,0.452167921657868,0.23517741427141,0,0.247194967734374,0.433798070759735,1.76922110389975,0.161766849947409,0.883366073841574,1.45462575940567,0,0.292780797011547,0.209446706813455,0.255457055208591,2.03685711660064,0.599902730993408,1.52484272487678,0.149790639404823,0,0.502617408451458,0,0,0,0.486723789203273,0.101839363850316,0.746441823660558,0.252722758433675,0.420883711772948,0.260240885925407,0,0.720248519221397,0.30140963567143,0.272145996605311,0.384341160854549,0.374806898238915,0.517406741478031,0.431135985865684,0.378212160335639,0.175951124163949,0,0,0,0.411564272815887,0.398068533636986,0.702213187313235,1.02939162845886,0.284163499395593,1.03562886267751,0.469052119962192,0,0,0.393528463494808,0.462801338662135,0,0.536546802799238,0.350296027101508,0.329119699826961,0,0.162137619091711,0.146199987425332,0.878200461164203,0,0,0.514523061896422,0.660837565967596,0,0.4265765010704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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12988
|HGNC=
|MCL_coexpression_id=521
|TSSclassifier=NA
|UniProt=P41241
|association_with_transcript=111bp_to_ENSMUST00000034863_5end
|cluster_id=chr9:57493339..57493348,-
|description=CAGE_peak_4_at_Csk_5end
|id=chr9:57493339..57493348,-
|ontology_enrichment_celltype=CL:0000988!1.31e-09!32;CL:0002032!1.31e-09!32;CL:0000037!1.31e-09!32;CL:0000566!1.31e-09!32;CL:0000837!1.31e-09!32;CL:0002031!3.68e-09!25;CL:0002320!5.03e-08!46;CL:0000134!5.03e-08!46;CL:0000738!2.17e-07!17;CL:0002087!2.17e-07!17
|ontology_enrichment_celltype_v019_2=CL:0002031,2.72e-16,25;CL:0000988,2.65e-15,32;CL:0002032,2.65e-15,32;CL:0000037,2.65e-15,32;CL:0000837,2.65e-15,32;CL:0002320,1.79e-11,46;CL:0000134,1.79e-11,46;CL:0000738,1.86e-10,17;CL:0002087,1.86e-10,17;CL:0000838,3.06e-09,12;CL:0000034,8.65e-09,97;CL:0000219,1.18e-08,54;CL:0000839,2.39e-08,13;CL:0000542,2.54e-08,13;CL:0000051,2.54e-08,13;CL:0000049,2.92e-08,19;CL:0000084,4.77e-08,11;CL:0000827,4.77e-08,11;CL:0000723,1.08e-07,91;CL:0000048,1.08e-07,91;CL:0000763,2.26e-07,16
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!1.15e-14!48;UBERON:0002390!2.72e-13!45;UBERON:0003061!2.72e-13!45;UBERON:0002405!7.38e-12!70;UBERON:0004177!6.09e-09!29;UBERON:0002384!5.03e-08!46;UBERON:0006562!1.10e-07!24;UBERON:0001557!1.10e-07!24;UBERON:0001042!1.10e-07!24;UBERON:0008814!1.10e-07!24;UBERON:0009145!1.10e-07!24;UBERON:0002370!2.16e-07!23;UBERON:0000974!2.16e-07!23;UBERON:0004807!2.16e-07!23;UBERON:0005058!2.16e-07!23;UBERON:0003351!2.16e-07!23;UBERON:0009113!2.16e-07!23;UBERON:0003295!2.16e-07!23;UBERON:0009722!2.16e-07!23;UBERON:0005562!2.16e-07!23;UBERON:0007690!2.16e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.70e-25,48;UBERON:0002405,6.70e-25,48;UBERON:0002390,2.66e-22,45;UBERON:0003061,2.66e-22,45;UBERON:0006562,2.89e-16,24;UBERON:0001557,2.89e-16,24;UBERON:0001042,2.89e-16,24;UBERON:0008814,2.89e-16,24;UBERON:0009145,2.89e-16,24;UBERON:0004177,7.91e-16,29;UBERON:0005057,7.91e-16,29;UBERON:0002370,1.08e-15,23;UBERON:0000974,1.08e-15,23;UBERON:0004807,1.08e-15,23;UBERON:0005058,1.08e-15,23;UBERON:0003351,1.08e-15,23;UBERON:0009113,1.08e-15,23;UBERON:0003295,1.08e-15,23;UBERON:0009722,1.08e-15,23;UBERON:0005562,1.08e-15,23;UBERON:0007690,1.08e-15,23;UBERON:0003408,8.72e-15,24;UBERON:0000072,9.44e-14,27;UBERON:0000077,6.32e-12,35;UBERON:0002384,1.79e-11,46;UBERON:0000065,7.64e-10,41;UBERON:0001004,1.88e-09,42;UBERON:0007811,8.19e-09,36;UBERON:0003081,1.10e-08,87;UBERON:0002371,3.10e-07,16;UBERON:0003929,3.67e-07,55
|phase1_expression=0.320297694209588,0.348975407639361,0.909998478779072,0.90739263392049,1.00179145989269,0.16787927191189,0.467225281191051,3.74457637980571,2.67498572088167,1.17032263160997,0.34243593645101,1.27635454392538,1.54080656938085,3.58423649917889,1.66554880907831,1.41732687172878,0,2.99689057090326,3.15363197293199,4.2438965179803,0.425216450755349,3.27660138962921,2.08959831311148,1.59992422793407,1.14704640533585,0,0.430761996159075,0.646413698057667,0.190023419456374,0.756090389279792,0.443461021310609,1.90509202037889,1.84519436275371,0,0.288851619751275,0.332469290716985,0.408338712524738,1.25559489221072,1.5626706890476,0,1.76469446409304,2.73218193983378,0,0.503587271902309,0,0.550640256485045,0,0.65407546914134,0,0,0.279972843250725,0,4.02678254538567,0.725362142011344,3.6970317905671,0.771778308107841,0.286533439938757,0,0.606949382578793,1.5869729378161,1.26766280701236,0.338844532069132,0.889294796111139,1.3498495759221,0.988866362566974,2.1314403448383,0.599200221036809,1.53687322128622,0.311068836925433,0.135005938331691,0.210324961351382,0.285650984403804,0.883474163806454,0.122490799214954,0.191690942036473,0.919218786610021,0,0,0.153606533256243,0.263772575460388,0.274462930807229,1.04182674111352,0,0,0,0.294628585473668,0.427115042397309,0.372798891650601,0.302904773332736,0.377857800533928,0,0.860423876981386,1.3599426674155,0.539703191637817,0,0.448026887097336,0.280888840263504,0.340860645156116,0.259786004602869,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0.79928715803342,3.10725460376606,0.445326417194474,0.520455980298408,0,0,0.452167921657868,0.23517741427141,0,0.247194967734374,0.433798070759735,1.76922110389975,0.161766849947409,0.883366073841574,1.45462575940567,0,0.292780797011547,0.209446706813455,0.255457055208591,2.03685711660064,0.599902730993408,1.52484272487678,0.149790639404823,0,0.502617408451458,0,0,0,0.486723789203273,0.101839363850316,0.746441823660558,0.252722758433675,0.420883711772948,0.260240885925407,0,0.720248519221397,0.30140963567143,0.272145996605311,0.384341160854549,0.374806898238915,0.517406741478031,0.431135985865684,0.378212160335639,0.175951124163949,0,0,0,0.411564272815887,0.398068533636986,0.702213187313235,1.02939162845886,0.284163499395593,1.03562886267751,0.469052119962192,0,0,0.393528463494808,0.462801338662135,0,0.536546802799238,0.350296027101508,0.329119699826961,0,0.162137619091711,0.146199987425332,0.878200461164203,0,0,0.514523061896422,0.660837565967596,0,0.426576501070468,0.464473343720877,0.644337306610467,0.403367049246685,0,0.570676878337677,0,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,1.79763881730844,0.216138049874694,0.597423819763102,2.0863469104839,0.228497025219458,1.1270773567308,0.610953983535943,0,0.210407459670956,0,0.147610147979602,0.156998727841375,0.123397163921801,0,1.00107063429656,0.786235980452812,0.449724224769707,0.811440485554012,0,0.25462585178142,0.863088412352432,0.972811360650212,0.549122826376163,2.87536413054709,1.48856379067401,1.87222603868736,0,0.179397413521912,0,1.66277871149944,0.37898282354097,0.651859905768103,0.339490171550376,0,0.670025029767263,0,0.585400943573396,1.7339865851681,0.8858587585951,1.2756381492599,0.983179888294428,0.863424909329478,0.723245292907558,6.03165135757089,3.26343410291226,0.491764273019036,0.275936746304732,0,0.117211686592203,0.327869890753351,0.252470927204373,1.57754109708128,0.780877488593277,1.07711698866399,1.19484398976276,0.668396022247182,1.98153571552183,1.61924280669958,0.876767573733936,1.18586333383957,0.642642632843614,0.283880170416537,0.534196811001766,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.922305443831782,0,0,0,0.632073515871632,0,1.03135543248187,0.340439605753788,0,0.388076051348264,0,0.532020700926821,0,0.493647061806363,0.304464949114599,0.938686832254841,0.21183207086382,0,0.49465875882444,0.807322133479528,0.180938774784468,0.238744688006273,0.328281799490123,1.7488850197791,0.556275906031529,2.22132145037209,0.619160603889667,0.925972636848558,0.565105371014073,2.1871076435364,1.37266903923914,1.86976272993241,3.63873776041511,1.93479963326193,0.954670618015114,0.316335993581135,0.406638934253697,0.540026704109006,0.627264888043406,0.436725127492355,0.134864346384821,0.578574190077352,0.785267825952089,0.129614973291793,0,0,0.448549638131936,0.330916980914195,0.583353565032143,0.129159823477731,0,0.352071715937262,0,0.209718688851422,0,0.288030006257865,3.79213344753814,1.82452693761148,2.15693010046137,2.33857481360031,1.79026695667481,5.36439657909415,2.52410443991935,1.32920574457119,3.12995994839258,1.295515713135,2.92395936896837,3.31356794515158,2.98256709085021,3.27255326108393,1.13365191807606,0.221985953374065,0.179427713218951,0.503653849092235,0.386379188064381,0.93841237725591,0.183151624267265,0.857473516316263,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0.830298780673413,0.798049746802062,0.170733605754134,1.45864030240976,0,0.735374033800057,0.44449345560323,0.412070114477788,0.64183841918363,0.505394423527595,0.50695859978048,0.754505365544305,0.936415074698824,0.576226371643824,0.861532034334199,0.476293691283074,0.811190281613988,0.192909220463705,0.412085900803307,1.32479028120958,1.37147700954166,0.70990322463735,0.476872379894642,0.290692833264657,0.0941093804153306,0.592302255241736,0.914639864363863,0.263069711437843,0.543216455383447,0,0.711810108745045,0.197008964751127,0.409231043169689,0.929621047115796,0.385813221962283,0.749431733813838,0,0.214871054048298,0.382576664137687,0.661774257358546,0.695603506861264
|short_description=p4@Csk
}}

Latest revision as of 21:36, 26 September 2015

Short description:p4@Csk
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Csk_5end
Coexpression cluster:MCL_coexpression_mm9:521
Association with transcript: 111bp_to_ENSMUST00000034863_5end
EntrezGene:Csk
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Csk

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.28
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.58
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I22.16
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F82.52
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C43.13
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A23.31
thymus, neonate N25.CNhs11125.1362-25G72.98
thymus, neonate N30.CNhs11132.1393-42G23.27
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system6.70e-2548
immune system6.70e-2548
hematopoietic system2.66e-2245
blood island2.66e-2245
pharynx2.89e-1624
upper respiratory tract2.89e-1624
chordate pharynx2.89e-1624
pharyngeal arch system2.89e-1624
pharyngeal region of foregut2.89e-1624
hemopoietic organ7.91e-1629
immune organ7.91e-1629
thymus1.08e-1523
neck1.08e-1523
respiratory system epithelium1.08e-1523
hemolymphoid system gland1.08e-1523
pharyngeal epithelium1.08e-1523
thymic region1.08e-1523
pharyngeal gland1.08e-1523
entire pharyngeal arch endoderm1.08e-1523
thymus primordium1.08e-1523
early pharyngeal endoderm1.08e-1523
gland of gut8.72e-1524
segment of respiratory tract9.44e-1427
mixed endoderm/mesoderm-derived structure6.32e-1235
connective tissue1.79e-1146
respiratory tract7.64e-1041
respiratory system1.88e-0942
craniocervical region8.19e-0936
lateral plate mesoderm1.10e-0887
bone marrow3.10e-0716
gut epithelium3.67e-0755
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