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FFCP PHASE1:Mm9::chr11:94335672..94335699,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:94335672..94335699,-
|DHSsupport=NA
|short_description=p1@Cacna1g
|DPIdataset=NA
|description=CAGE_peak_1_at_Cacna1g_5end
|association_with_transcript=-160bp_to_NM_001112813,NM_001177888,NM_001177890,NM_009783,uc007kyr.2,uc007kys.2,uc011ycv.1,uc011ycw.1_5end
|EntrezGene=12291
|EntrezGene=12291
|HGNC=
|HGNC=
|MCL_coexpression_id=2739
|TSSclassifier=NA
|UniProt=E9PWL1,Q27YN9,Q9WUT2,Q5SUF9,Q6PFV8,Q5SUG1,Q6ZPX4,Q5SUG4
|UniProt=E9PWL1,Q27YN9,Q9WUT2,Q5SUF9,Q6PFV8,Q5SUG1,Q6ZPX4,Q5SUG4
|association_with_transcript=-160bp_to_NM_001112813,NM_001177888,NM_001177890,NM_009783,uc007kyr.2,uc007kys.2,uc011ycv.1,uc011ycw.1_5end
|cluster_id=chr11:94335672..94335699,-
|description=CAGE_peak_1_at_Cacna1g_5end
|id=chr11:94335672..94335699,-
|ontology_enrichment_celltype=CL:0000117!1.63e-09!23;CL:0000337!1.63e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,6.26e-10,23;CL:0000337,6.26e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.67e-17!63;UBERON:0001049!2.89e-17!52;UBERON:0005068!2.89e-17!52;UBERON:0006241!2.89e-17!52;UBERON:0007135!2.89e-17!52;UBERON:0000955!1.63e-16!50;UBERON:0006238!1.63e-16!50;UBERON:0002616!6.43e-16!49;UBERON:0001017!7.46e-16!73;UBERON:0005743!7.46e-16!73;UBERON:0002346!7.59e-16!71;UBERON:0003075!7.59e-16!71;UBERON:0007284!7.59e-16!71;UBERON:0000073!7.74e-15!75;UBERON:0001016!7.74e-15!75;UBERON:0003056!4.79e-14!49;UBERON:0004121!2.67e-13!102;UBERON:0000924!2.67e-13!102;UBERON:0006601!2.67e-13!102;UBERON:0002020!3.79e-12!34;UBERON:0003080!4.29e-12!40;UBERON:0002780!1.75e-11!39;UBERON:0001890!1.75e-11!39;UBERON:0006240!1.75e-11!39;UBERON:0000153!5.69e-11!94;UBERON:0002791!1.72e-09!29;UBERON:0003528!1.72e-09!29;UBERON:0001893!1.72e-09!29;UBERON:0000468!2.39e-09!333;UBERON:0007811!1.38e-08!86;UBERON:0000922!5.57e-07!328;UBERON:0000025!6.39e-07!114;UBERON:0002021!8.23e-07!10;UBERON:0000411!8.23e-07!10;UBERON:0001950!8.23e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.37e-19,54;UBERON:0002346,4.85e-18,64;UBERON:0003075,4.85e-18,64;UBERON:0007284,4.85e-18,64;UBERON:0001049,1.35e-17,52;UBERON:0005068,1.35e-17,52;UBERON:0006241,1.35e-17,52;UBERON:0007135,1.35e-17,52;UBERON:0010371,4.21e-16,73;UBERON:0001017,8.63e-16,73;UBERON:0010314,8.36e-15,92;UBERON:0000955,9.49e-15,47;UBERON:0006238,9.49e-15,47;UBERON:0001016,1.44e-14,75;UBERON:0003056,2.14e-14,49;UBERON:0004121,2.89e-14,95;UBERON:0000924,2.89e-14,95;UBERON:0006601,2.89e-14,95;UBERON:0002616,3.79e-14,46;UBERON:0002020,2.25e-12,34;UBERON:0003080,2.43e-12,40;UBERON:0002780,1.05e-11,39;UBERON:0001890,1.05e-11,39;UBERON:0006240,1.05e-11,39;UBERON:0003528,1.33e-09,29;UBERON:0002791,1.33e-09,29;UBERON:0001893,1.33e-09,29;UBERON:0000922,3.58e-07,320;UBERON:0002021,4.36e-07,10;UBERON:0000411,4.36e-07,10;UBERON:0001950,4.36e-07,10
|phase1_expression=5.76535849577258,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,6.54833334163237,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.80560271448579,6.2853697356099,0.550640256485045,10.1710874765245,0.218025156380447,0.659058548203415,1.94429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0.515672092277442,26.7057728334669,16.9277113367051,17.747279298173,0.677689064138264,0.889294796111139,0,0.988866362566974,0,1.79760066311043,0,3.42175720617976,5.8052553482627,3.57552434297349,26.5655415495537,23.412065340871,2.9397791811589,3.54628242767475,4.5960939330501,44.0463523997555,54.0117440100344,38.0944202475484,40.0934314699789,30.5568729632048,31.2548022334056,22.3346399201105,18.0084035210138,22.6141406709679,22.6864010814724,20.0744069926735,22.3679334990361,0.151452386666368,0.0755715601067855,0.579728977403356,0,0.679971333707751,0,0,0,1.54488862144927,0,0.259786004602869,0.35333957451034,0.281686839553361,16.6824420638613,96.8259910885254,63.9960032837998,0,0,0,1.02765491747154,0,0,2.60227990149204,0.913396434936424,2.99800146432876,1.65794904607885,1.99900802130698,0.502666365318702,0.247194967734374,1.15679485535929,0,8.08834249737046,4.63767188766826,2.42437626567611,0,57.0922554172517,69.3268599552536,0.255457055208591,0,0,0,37.5974504906105,12.3525162761029,9.1727677042391,21.2065670634577,15.3429274398198,36.7784838870421,24.9851545124347,9.980257657331,2.48813941220186,0,5.05060454127538,13.2722851821958,6.20735681970377,9.54329287968351,9.94651797715719,10.5456573684558,10.8896662242122,11.7127155699661,15.78090561508,17.8921434134259,31.0133971475224,32.9028602186584,16.4396799320681,28.0827721717854,16.3678518265418,19.3435208223467,14.7285357445685,0,0,0,1.44988040774851,1.64168241986767,3.96136535214233,4.02466050494857,7.08351234290654,5.39934895105824,6.0458825635106,12.0723030629829,5.7215017759913,16.9496645410885,11.8200574136949,8.91756905004413,10.0877991323479,11.1970558798436,6.44190810049784,13.6688466566683,12.3485534855141,0,0,7.03851226766272,7.89604684325491,5.54130083685001,4.23535401709019,4.89231696458715,2.47293313946327,0.474529061544512,1.31759163779209,2.01068167040216,1.1937388322469,1.36474860983384,0.898819408654221,1.72910439899755,1.39398891278057,3.60369011810855,3.99869794134051,5.63538678365402,5.09128319613286,6.59438456369928,5.04977903210294,2.90888070771584,0.590440591918409,0.784993639206874,0.246794327843601,0,0.667380422864376,1.76903095601883,0.449724224769707,0.608580364165509,0.241177159752417,0.763877555344259,1.15078454980324,0,0.274561413188081,0,0,0,0,0.358794827043824,0,0.369506380333209,6.253216588426,4.72598431681875,3.90413697282933,3.75504397261603,8.5428191295326,9.52174563544055,4.29294025287157,2.36452716159286,1.99318220683897,3.02964060449226,0.655453258862952,0.863424909329478,0.578596234326046,0,0,0,0,19.4266213885228,17.1129062424617,5.08198330667694,2.01976741763498,0.94652465824877,0.390438744296638,2.58508077279359,0,0.222798674082394,0,4.04810701674894,3.21481443702443,3.95287777946523,26.0270266301664,2.41298144854057,17.0942979520565,13.845391545054,6.76377504187395,0,5.34117399540959,3.02323556964751,1.32023555829129,2.36241514304618,2.15204603560749,0.775284879504663,0,1.42598951353889,1.26414703174326,0,2.06271086496374,2.04263763452273,7.56256594931503,7.37344497561701,7.28745919107414,12.4138163549592,10.5237602385222,9.21474515371877,9.43841342255258,0.23467170806371,0,0.661585194164886,9.0687439117814,11.1410454420175,4.76472106932431,3.34242563208782,1.31312719796049,2.04036585640896,18.3571048990405,0.512612642393558,13.8279201535359,7.40778109478847,0.376736914009382,0.27338845544205,0,0,0,0,0,5.3777118908793,6.70954241518601,3.34816556547584,4.59994251231831,3.05707589244649,2.15782954215713,1.98368293740806,1.30877970992015,1.55537967950151,0.621339313086926,0,7.62534384824292,6.12196414691261,10.6948153589226,6.97463046779748,6.9272011451219,4.5769323071844,2.99470085141085,1.04859344425711,0.483168241652012,0,0,2.43270258348197,0.924398614483445,0,0,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,1.58711268530648,0.221985953374065,0.0897138566094757,0,0.579568782096571,4.129014459926,8.60812634056146,5.14484109789758,1.50471631210609,28.2375921308533,22.5559365888517,24.0616115644547,35.745461927487,21.9226406326606,21.1510291269116,13.5004500046361,22.0657389579868,24.0165476761628,30.5478583933574,5.60451676954554,16.3600198094423,14.000155671839,10.6966955510049,6.49800804146745,9.55986243940074,14.2237905793034,12.3621034343337,13.1576875932644,13.3929522234813,15.2087579934144,11.6948331659367,13.6716600906028,13.5733323098323,11.8891420738119,20.9569224164552,13.7902347874378,9.45255180272155,8.65380391686944,13.8366984926333,9.94320831917705,11.3584515941976,13.8292990169446,11.7730597472186,8.56395361779509,13.1998788311015,9.87811053512972,11.5750673032651,11.2717414492065,10.1005608898393,10.914421667424,12.3130602969454,11.0492381655816,12.5498841360632,11.9602098808308,11.9909077410214,8.88940112092552,8.80971321598023,8.60797494309795,4.63241980150983,3.47801753430632
|phase1_expression=5.76535849577258,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,6.54833334163237,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.80560271448579,6.2853697356099,0.550640256485045,10.1710874765245,0.218025156380447,0.659058548203415,1.94429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0.515672092277442,26.7057728334669,16.9277113367051,17.747279298173,0.677689064138264,0.889294796111139,0,0.988866362566974,0,1.79760066311043,0,3.42175720617976,5.8052553482627,3.57552434297349,26.5655415495537,23.412065340871,2.9397791811589,3.54628242767475,4.5960939330501,44.0463523997555,54.0117440100344,38.0944202475484,40.0934314699789,30.5568729632048,31.2548022334056,22.3346399201105,18.0084035210138,22.6141406709679,22.6864010814724,20.0744069926735,22.3679334990361,0.151452386666368,0.0755715601067855,0.579728977403356,0,0.679971333707751,0,0,0,1.54488862144927,0,0.259786004602869,0.35333957451034,0.281686839553361,16.6824420638613,96.8259910885254,63.9960032837998,0,0,0,1.02765491747154,0,0,2.60227990149204,0.913396434936424,2.99800146432876,1.65794904607885,1.99900802130698,0.502666365318702,0.247194967734374,1.15679485535929,0,8.08834249737046,4.63767188766826,2.42437626567611,0,57.0922554172517,69.3268599552536,0.255457055208591,0,0,0,37.5974504906105,12.3525162761029,9.1727677042391,21.2065670634577,15.3429274398198,36.7784838870421,24.9851545124347,9.980257657331,2.48813941220186,0,5.05060454127538,13.2722851821958,6.20735681970377,9.54329287968351,9.94651797715719,10.5456573684558,10.8896662242122,11.7127155699661,15.78090561508,17.8921434134259,31.0133971475224,32.9028602186584,16.4396799320681,28.0827721717854,16.3678518265418,19.3435208223467,14.7285357445685,0,0,0,1.44988040774851,1.64168241986767,3.96136535214233,4.02466050494857,7.08351234290654,5.39934895105824,6.0458825635106,12.0723030629829,5.7215017759913,16.9496645410885,11.8200574136949,8.91756905004413,10.0877991323479,11.1970558798436,6.44190810049784,13.6688466566683,12.3485534855141,0,0,7.03851226766272,7.89604684325491,5.54130083685001,4.23535401709019,4.89231696458715,2.47293313946327,0.474529061544512,1.31759163779209,2.01068167040216,1.1937388322469,1.36474860983384,0.898819408654221,1.72910439899755,1.39398891278057,3.60369011810855,3.99869794134051,5.63538678365402,5.09128319613286,6.59438456369928,5.04977903210294,2.90888070771584,0.590440591918409,0.784993639206874,0.246794327843601,0,0.667380422864376,1.76903095601883,0.449724224769707,0.608580364165509,0.241177159752417,0.763877555344259,1.15078454980324,0,0.274561413188081,0,0,0,0,0.358794827043824,0,0.369506380333209,6.253216588426,4.72598431681875,3.90413697282933,3.75504397261603,8.5428191295326,9.52174563544055,4.29294025287157,2.36452716159286,1.99318220683897,3.02964060449226,0.655453258862952,0.863424909329478,0.578596234326046,0,0,0,0,19.4266213885228,17.1129062424617,5.08198330667694,2.01976741763498,0.94652465824877,0.390438744296638,2.58508077279359,0,0.222798674082394,0,4.04810701674894,3.21481443702443,3.95287777946523,26.0270266301664,2.41298144854057,17.0942979520565,13.845391545054,6.76377504187395,0,5.34117399540959,3.02323556964751,1.32023555829129,2.36241514304618,2.15204603560749,0.775284879504663,0,1.42598951353889,1.26414703174326,0,2.06271086496374,2.04263763452273,7.56256594931503,7.37344497561701,7.28745919107414,12.4138163549592,10.5237602385222,9.21474515371877,9.43841342255258,0.23467170806371,0,0.661585194164886,9.0687439117814,11.1410454420175,4.76472106932431,3.34242563208782,1.31312719796049,2.04036585640896,18.3571048990405,0.512612642393558,13.8279201535359,7.40778109478847,0.376736914009382,0.27338845544205,0,0,0,0,0,5.3777118908793,6.70954241518601,3.34816556547584,4.59994251231831,3.05707589244649,2.15782954215713,1.98368293740806,1.30877970992015,1.55537967950151,0.621339313086926,0,7.62534384824292,6.12196414691261,10.6948153589226,6.97463046779748,6.9272011451219,4.5769323071844,2.99470085141085,1.04859344425711,0.483168241652012,0,0,2.43270258348197,0.924398614483445,0,0,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,1.58711268530648,0.221985953374065,0.0897138566094757,0,0.579568782096571,4.129014459926,8.60812634056146,5.14484109789758,1.50471631210609,28.2375921308533,22.5559365888517,24.0616115644547,35.745461927487,21.9226406326606,21.1510291269116,13.5004500046361,22.0657389579868,24.0165476761628,30.5478583933574,5.60451676954554,16.3600198094423,14.000155671839,10.6966955510049,6.49800804146745,9.55986243940074,14.2237905793034,12.3621034343337,13.1576875932644,13.3929522234813,15.2087579934144,11.6948331659367,13.6716600906028,13.5733323098323,11.8891420738119,20.9569224164552,13.7902347874378,9.45255180272155,8.65380391686944,13.8366984926333,9.94320831917705,11.3584515941976,13.8292990169446,11.7730597472186,8.56395361779509,13.1998788311015,9.87811053512972,11.5750673032651,11.2717414492065,10.1005608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|short_description=p1@Cacna1g
}}
}}

Latest revision as of 23:50, 25 September 2015

Short description:p1@Cacna1g
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cacna1g_5end
Coexpression cluster:MCL_coexpression_mm9:2739
Association with transcript: -160bp_to_NM_001112813, NM_001177888, NM_001177890, NM_009783, uc007kyr.2, uc007kys.2, uc011ycv.1, uc011ycw.1_5end
EntrezGene:Cacna1g
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cacna1g

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.29
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C326.71
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C717.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F126.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D523.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D344.05
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F354.01
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D738.09
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D440.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F430.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.69
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.07
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I896.83
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B664.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F58.09
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B257.09
cerebellum, neonate N30.CNhs11135.1395-42I269.33
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A437.60
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F19.17
cortex, adult.CNhs10473.12-14D521.21
cortex, neonate N30.CNhs11107.1392-42F215.34
diencephalon, adult.CNhs10482.20-12F236.78
diencephalon, neonate N30.CNhs11201.1388-42B224.99
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.98
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.49
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C613.27
eyeball, embryo E14.CNhs10521.399-16E26.21
eyeball, embryo E15.CNhs10593.426-16C99.54
eyeball, embryo E17.CNhs11023.1261-18D49.95
eyeball, neonate N00.CNhs11207.633-15C610.55
eyeball, neonate N01.CNhs11140.1532-43E710.89
eyeball, neonate N02.CNhs11205.1551-44G811.71
eyeball, neonate N16.CNhs11188.777-19A215.78
forelimb, embryo E11.CNhs10596.335-25E217.89
forelimb, embryo E12.CNhs10600.359-14H231.01
forelimb, embryo E13.CNhs10589.384-1E232.90
forelimb, embryo E14.CNhs10577.413-26A816.44
forelimb, embryo E15.CNhs11007.437-20E728.08
forelimb, embryo E17.CNhs10598.1517-43C416.37
forelimb, embryo E18.CNhs11008.1520-43B519.34
gonad, embryo E13.CNhs11044.1564-45I614.73
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C87.08
heart, embryo E16.CNhs11021.457-17C65.40
heart, embryo E17.CNhs11025.479-18E56.05
heart, embryo E18.CNhs11030.1283-20G312.07
heart, neonate N00.CNhs11213.639-21E35.72
heart, neonate N03.CNhs11221.1349-25I216.95
heart, neonate N10.CNhs11118.749-24G111.82
heart, neonate N16.CNhs11209.782-15G18.92
heart, neonate N20.CNhs11127.821-26I610.09
heart, neonate N25.CNhs11196.1351-25D311.20
heart, neonate N30.CNhs11202.1390-42D26.44
hippocampus, adult.CNhs10478.13-16E813.67
hippocampus, neonate N00.CNhs11228.627-43G112.35
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I57.04
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D85.54
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I93.60
kidney, embryo E15.CNhs10997.434-16F84.00
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C76.59
kidney, neonate N00.CNhs11214.646-21G75.05
kidney, neonate N10.CNhs11206.758-6D52.91
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G26.25
lung, embryo E14.CNhs10604.404-26F84.73
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A68.54
lung, embryo E18.CNhs10583.1287-20I69.52
lung, neonate N00.CNhs11224.640-42C64.29
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C219.43
medulla oblongata, neonate N30.CNhs11200.1396-42A317.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I926.03
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H717.09
ovary, neonate N00.CNhs11217.1299-22I413.85
oviduct, adult pregnant day01.CNhs10500.988-6G66.76
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E67.56
pituitary gland, embryo E13.CNhs11009.370-44C77.37
pituitary gland, embryo E14.CNhs11037.398-44A57.29
pituitary gland, embryo E15.CNhs10592.427-16B912.41
pituitary gland, embryo E16.CNhs11036.449-43F610.52
pituitary gland, embryo E17.CNhs11039.1265-44F59.21
pituitary gland, neonate N00.CNhs11190.1308-22E99.44
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C39.07
skin, neonate N00.CNhs11124.650-25G411.14
skin, neonate N03.CNhs11215.662-22H34.76
skin, neonate N06.CNhs11097.693-20I53.34
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C918.36
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C113.83
spleen, embryo E18.CNhs11011.1271-21F27.41
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E35.38
stomach, embryo E15.CNhs10603.1252-16G86.71
stomach, embryo E16.CNhs11022.459-17D43.35
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F57.63
testis, embryo E15.CNhs11034.443-27C56.12
testis, embryo E16.CNhs11033.470-26G510.69
testis, embryo E17.CNhs11029.486-18I56.97
testis, embryo E18.CNhs11027.503-18G56.93
testis, neonate N00.CNhs11189.1300-22B74.58
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E58.61
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A128.24
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.15
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.02
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.55
whole body, embryo E11.CNhs11014.324-5I85.60
whole body, embryo E12.CNhs10587.857-27C916.36
whole body, embryo E13.CNhs10512.372-23H214.00
whole body, embryo E14.5.CNhs10578.420-27D210.70
whole body, embryo E14.CNhs10519.395-14B16.50
whole body, embryo E16.CNhs10514.453-14F29.56
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.16
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.21
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.69
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.57
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.96
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.45
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.84
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.36
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.83
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.77
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.31
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.55
whole body, embryo E17.5.CNhs10513.490-9F911.96
whole body, embryo E17.CNhs10517.475-3I511.99
whole body, embryo E18.CNhs10516.493-3B38.89
whole body, neonate N00.CNhs10525.657-19C28.81
whole body, neonate N01.CNhs10576.659-23C68.61
whole body, neonate N06.CNhs10515.692-21D14.63
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.26e-1023
neuroblast (sensu Vertebrata)6.26e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.37e-1954
neurectoderm4.85e-1864
neural plate4.85e-1864
presumptive neural plate4.85e-1864
neural tube1.35e-1752
neural rod1.35e-1752
future spinal cord1.35e-1752
neural keel1.35e-1752
ecto-epithelium4.21e-1673
central nervous system8.63e-1673
structure with developmental contribution from neural crest8.36e-1592
brain9.49e-1547
future brain9.49e-1547
nervous system1.44e-1475
pre-chordal neural plate2.14e-1449
ectoderm-derived structure2.89e-1495
ectoderm2.89e-1495
presumptive ectoderm2.89e-1495
regional part of brain3.79e-1446
gray matter2.25e-1234
anterior neural tube2.43e-1240
regional part of forebrain1.05e-1139
forebrain1.05e-1139
future forebrain1.05e-1139
brain grey matter1.33e-0929
regional part of telencephalon1.33e-0929
telencephalon1.33e-0929
embryo3.58e-07320
occipital lobe4.36e-0710
visual cortex4.36e-0710
neocortex4.36e-0710
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