FFCP PHASE1:Mm9::chr12:4914035..4914063,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:4914035..4914063,-
|short_description=p3@Ubxn2a
|description=CAGE_peak_3_at_Ubxn2a_5end
|association_with_transcript=6bp_to_ENSMUST00000142867_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=217379 | |EntrezGene=217379 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1230 | |||
|TSSclassifier=NA | |||
|UniProt=Q99KJ0 | |UniProt=Q99KJ0 | ||
|association_with_transcript=6bp_to_ENSMUST00000142867_5end | |||
|cluster_id=chr12:4914035..4914063,- | |||
|description=CAGE_peak_3_at_Ubxn2a_5end | |||
|id=chr12:4914035..4914063,- | |||
|ontology_enrichment_celltype=CL:0000838!1.53e-07!12;CL:0000084!5.50e-07!11;CL:0000827!5.50e-07!11;CL:0000791!9.66e-07!9;CL:0000789!9.66e-07!9;CL:0002420!9.66e-07!9;CL:0002419!9.66e-07!9;CL:0000790!9.66e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.93e-09,12;CL:0000791,2.95e-09,9;CL:0000789,2.95e-09,9;CL:0002420,2.95e-09,9;CL:0002419,2.95e-09,9;CL:0000790,2.95e-09,9;CL:0000084,1.90e-08,11;CL:0000827,1.90e-08,11;CL:0002563,2.48e-08,9;CL:0002251,2.48e-08,9;CL:0000624,2.52e-08,8;CL:0000542,2.98e-08,13;CL:0000051,2.98e-08,13;CL:0000239,3.61e-07,6;CL:0000677,3.61e-07,6;CL:0000584,3.61e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.33e-11!130;UBERON:0000925!2.33e-11!130;UBERON:0006595!2.33e-11!130;UBERON:0001007!4.36e-11!128;UBERON:0001555!4.36e-11!128;UBERON:0007026!4.36e-11!128;UBERON:0004923!1.07e-10!24;UBERON:0004921!3.93e-10!126;UBERON:0004185!3.93e-10!126;UBERON:0000344!6.09e-10!15;UBERON:0005409!2.13e-09!59;UBERON:0007023!2.17e-09!51;UBERON:0000160!1.05e-08!43;UBERON:0001242!1.37e-08!13;UBERON:0000060!1.37e-08!13;UBERON:0001262!1.37e-08!13;UBERON:0004786!1.37e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.94e-15,31;UBERON:0000344,5.41e-14,15;UBERON:0005409,4.73e-13,47;UBERON:0004923,2.02e-12,24;UBERON:0001242,5.45e-12,13;UBERON:0001262,5.45e-12,13;UBERON:0004786,5.45e-12,13;UBERON:0004119,3.71e-09,118;UBERON:0000925,3.71e-09,118;UBERON:0006595,3.71e-09,118;UBERON:0001007,3.84e-09,116;UBERON:0001555,3.84e-09,116;UBERON:0007026,3.84e-09,116;UBERON:0003350,2.48e-08,9;UBERON:0004808,2.48e-08,9;UBERON:0001277,2.48e-08,9;UBERON:0004921,4.54e-08,114;UBERON:0007023,1.55e-07,51 | |||
|phase1_expression=0.320297694209588,18.1467211972468,22.7499619694768,10.8887116070459,6.01074875935617,9.9048770428015,8.41005506143892,11.4919757863003,6.05391505252167,5.38348410540585,9.58820622062828,8.21653237651965,6.16322627752341,6.11942816932982,2.33176833270964,1.21485160433896,2.79824751251259,0.946386496074713,0.548457734422955,2.12194825899015,1.27564935226605,0.992909512008853,1.82839852397255,15.8392498565473,11.6998733344257,23.5435105287158,16.7997178502039,14.8675150553263,6.27077284206034,7.56090389279792,11.5299865540758,0,0.61506478758457,0,3.17736781726402,1.49611180822643,1.63335485009895,0.837063261473815,0,0.523523743973798,4.70585190424811,2.73218193983378,0.485510353031154,0,0,0,0,0.218025156380447,0,0,0,0,6.37573903019398,9.42970784614748,9.74672017513146,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,0,0,0,0.0958454710182364,0,0,1.65993539510744,1.0752457327937,0.131886287730194,0.182975287204819,0,1.95428099300967,0,0.763991238884051,0.589257170947335,0.142371680799103,0,0.227178579999552,0.151143120213571,7.8263411949453,0,0,0.539703191637817,1.29955283489534,0.448026887097336,1.68533304158102,0,0.259786004602869,0,0.14084341977668,0,0,0,0.649473123033642,2.02687892380079,0.505524445014783,2.39786147410026,2.58937883647172,0.29688427812965,0.173485326766136,0,0,0,0,0,6.92145909656247,1.87979163995885,0.884610551949874,0.485300549842228,1.76673214768315,1.93950101254089,1.86391761218122,0.585561594023094,0.83778682725382,5.36459815938042,1.7972268675888,2.99951365496704,2.03312363316904,0.449371918214468,0.457500602818626,0,0.521472960576829,1.27857728665165,0.83115217823824,0.648965052271031,0,1.49288364732112,1.26361379216837,0.420883711772948,0,0,0,0,0.204109497453984,0.2562274405697,0.187403449119458,0.776110112217047,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0.772043721344145,1.98914449576915,0.414251545071004,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.820837320395476,1.62137619091711,0.730999937126662,1.3173006917463,1.34206418760372,0.420579897128254,0,15.8601015832223,1.32225283331772,0,0,0.38660238396628,1.21010114774006,0.889512175379481,1.33157938278791,4.2707615539006,1.15289268306808,1.75934646160189,1.79060824837036,1.36474860983384,2.69645822596266,5.40345124686736,7.76650965692032,0.379335801906163,0.228497025219458,0,0,0,0.49095073923223,0.442655759869801,1.03327103585722,1.255989822731,1.72756029490521,1.77871576252289,1.16791574001266,0.393117990226406,1.57403478669398,2.02860121388503,0.72353147925725,0.50925170356284,0.287696137450811,2.43202840162553,0.274561413188081,1.43768206527355,0,0.312037673114561,0.757736633841335,0.179397413521912,1.92977408545347,1.84753190166605,0,0,0.339490171550376,0,0.335012514883631,0.476087281772027,0.390267295715598,0.157635144106191,0.8858587585951,0.478364305972461,0.983179888294428,0.863424909329478,1.01254341007058,0,0,3.44234991113325,1.93155722413313,2.72936002979246,2.10981035865966,0.163934945376675,4.29200576247434,0,0.780877488593277,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0.567760340833074,0,0,0.494910368917606,1.32745138339963,0,0,0.188605079755898,0.885905678642318,0,0.775284879504663,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,3.09406629744561,2.38307724027652,0,0,0.214337035031592,0.354680467284547,0.356737635204141,0.658196082408484,0.304464949114599,1.17335854031855,0.63549621259146,0.441056796109924,0.49465875882444,0.322928853391811,0.120625849856312,0.477489376012546,0.164140899745061,2.33184669303881,4.07935664423121,2.39219233116994,0.206386867963223,0.925972636848558,1.50694765603753,0.956859594047176,2.74533807847827,7.13909405974192,7.13752406850656,6.77179871641677,4.77335309007557,0,0,0.216010681643603,0.209088296014469,0.655087691238533,0.944050424693745,1.81837602595739,3.66458318777641,1.68499465279331,2.4853572523477,0.56369293868419,0.149516546043979,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0.314578033277133,0,0.288030006257865,0.632022241256357,0,0.410843828659309,0,0.358053391334963,0.79472541912506,0.480781798079875,0.443068581523732,0.706765149637033,0.609654453239999,0.302478555410522,0.877120926657772,0.288635524920988,0.818138315270983,2.72076460338254,0.887943813496259,1.25599399253266,1.34307693091263,0.579568782096571,1.31377732815827,1.46521299413812,1.50057865355346,1.00314420807073,0,0,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,1.35004500046361,0,1.35942722695261,0,0,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.512201219238954,0.287177344778066,0,0.695305955669133,0.192909220463705,0.824171801606613,0.735994600671987,0,0.887379030796687,0,0,0.0941093804153306,0.423073039458382,0.548783918618318,0,0,0,0.237270036248348,0.295513447126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| |phase1_expression=0.320297694209588,18.1467211972468,22.7499619694768,10.8887116070459,6.01074875935617,9.9048770428015,8.41005506143892,11.4919757863003,6.05391505252167,5.38348410540585,9.58820622062828,8.21653237651965,6.16322627752341,6.11942816932982,2.33176833270964,1.21485160433896,2.79824751251259,0.946386496074713,0.548457734422955,2.12194825899015,1.27564935226605,0.992909512008853,1.82839852397255,15.8392498565473,11.6998733344257,23.5435105287158,16.7997178502039,14.8675150553263,6.27077284206034,7.56090389279792,11.5299865540758,0,0.61506478758457,0,3.17736781726402,1.49611180822643,1.63335485009895,0.837063261473815,0,0.523523743973798,4.70585190424811,2.73218193983378,0.485510353031154,0,0,0,0,0.218025156380447,0,0,0,0,6.37573903019398,9.42970784614748,9.74672017513146,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,0,0,0,0.0958454710182364,0,0,1.65993539510744,1.0752457327937,0.131886287730194,0.182975287204819,0,1.95428099300967,0,0.763991238884051,0.589257170947335,0.142371680799103,0,0.227178579999552,0.151143120213571,7.8263411949453,0,0,0.539703191637817,1.29955283489534,0.448026887097336,1.68533304158102,0,0.259786004602869,0,0.14084341977668,0,0,0,0.649473123033642,2.02687892380079,0.505524445014783,2.39786147410026,2.58937883647172,0.29688427812965,0.173485326766136,0,0,0,0,0,6.92145909656247,1.87979163995885,0.884610551949874,0.485300549842228,1.76673214768315,1.93950101254089,1.86391761218122,0.585561594023094,0.83778682725382,5.36459815938042,1.7972268675888,2.99951365496704,2.03312363316904,0.449371918214468,0.457500602818626,0,0.521472960576829,1.27857728665165,0.83115217823824,0.648965052271031,0,1.49288364732112,1.26361379216837,0.420883711772948,0,0,0,0,0.204109497453984,0.2562274405697,0.187403449119458,0.776110112217047,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0.772043721344145,1.98914449576915,0.414251545071004,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.820837320395476,1.62137619091711,0.730999937126662,1.3173006917463,1.34206418760372,0.420579897128254,0,15.8601015832223,1.32225283331772,0,0,0.38660238396628,1.21010114774006,0.889512175379481,1.33157938278791,4.2707615539006,1.15289268306808,1.75934646160189,1.79060824837036,1.36474860983384,2.69645822596266,5.40345124686736,7.76650965692032,0.379335801906163,0.228497025219458,0,0,0,0.49095073923223,0.442655759869801,1.03327103585722,1.255989822731,1.72756029490521,1.77871576252289,1.16791574001266,0.393117990226406,1.57403478669398,2.02860121388503,0.72353147925725,0.50925170356284,0.287696137450811,2.43202840162553,0.274561413188081,1.43768206527355,0,0.312037673114561,0.757736633841335,0.179397413521912,1.92977408545347,1.84753190166605,0,0,0.339490171550376,0,0.335012514883631,0.476087281772027,0.390267295715598,0.157635144106191,0.8858587585951,0.478364305972461,0.983179888294428,0.863424909329478,1.01254341007058,0,0,3.44234991113325,1.93155722413313,2.72936002979246,2.10981035865966,0.163934945376675,4.29200576247434,0,0.780877488593277,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0.567760340833074,0,0,0.494910368917606,1.32745138339963,0,0,0.188605079755898,0.885905678642318,0,0.775284879504663,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,3.09406629744561,2.38307724027652,0,0,0.214337035031592,0.354680467284547,0.356737635204141,0.658196082408484,0.304464949114599,1.17335854031855,0.63549621259146,0.441056796109924,0.49465875882444,0.322928853391811,0.120625849856312,0.477489376012546,0.164140899745061,2.33184669303881,4.07935664423121,2.39219233116994,0.206386867963223,0.925972636848558,1.50694765603753,0.956859594047176,2.74533807847827,7.13909405974192,7.13752406850656,6.77179871641677,4.77335309007557,0,0,0.216010681643603,0.209088296014469,0.655087691238533,0.944050424693745,1.81837602595739,3.66458318777641,1.68499465279331,2.4853572523477,0.56369293868419,0.149516546043979,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0.314578033277133,0,0.288030006257865,0.632022241256357,0,0.410843828659309,0,0.358053391334963,0.79472541912506,0.480781798079875,0.443068581523732,0.706765149637033,0.609654453239999,0.302478555410522,0.877120926657772,0.288635524920988,0.818138315270983,2.72076460338254,0.887943813496259,1.25599399253266,1.34307693091263,0.579568782096571,1.31377732815827,1.46521299413812,1.50057865355346,1.00314420807073,0,0,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,1.35004500046361,0,1.35942722695261,0,0,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.512201219238954,0.287177344778066,0,0.695305955669133,0.192909220463705,0.824171801606613,0.735994600671987,0,0.887379030796687,0,0,0.0941093804153306,0.423073039458382,0.548783918618318,0,0,0,0.237270036248348,0.295513447126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| ||
|short_description=p3@Ubxn2a | |||
}} | }} |
Latest revision as of 15:28, 26 September 2015
Short description: | p3@Ubxn2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ubxn2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1230 |
Association with transcript: | 6bp_to_ENSMUST00000142867_5end |
EntrezGene: | Ubxn2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.93e-09 | 12 |
mature alpha-beta T cell | 2.95e-09 | 9 |
alpha-beta T cell | 2.95e-09 | 9 |
immature T cell | 2.95e-09 | 9 |
mature T cell | 2.95e-09 | 9 |
immature alpha-beta T cell | 2.95e-09 | 9 |
T cell | 1.90e-08 | 11 |
pro-T cell | 1.90e-08 | 11 |
intestinal epithelial cell | 2.48e-08 | 9 |
epithelial cell of alimentary canal | 2.48e-08 | 9 |
CD4-positive, alpha-beta T cell | 2.52e-08 | 8 |
lymphocyte | 2.98e-08 | 13 |
common lymphoid progenitor | 2.98e-08 | 13 |
brush border epithelial cell | 3.61e-07 | 6 |
gut absorptive cell | 3.61e-07 | 6 |
enterocyte | 3.61e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.94e-15 | 31 |
mucosa | 5.41e-14 | 15 |
gastrointestinal system | 4.73e-13 | 47 |
organ component layer | 2.02e-12 | 24 |
intestinal mucosa | 5.45e-12 | 13 |
wall of intestine | 5.45e-12 | 13 |
gastrointestinal system mucosa | 5.45e-12 | 13 |
endoderm-derived structure | 3.71e-09 | 118 |
endoderm | 3.71e-09 | 118 |
presumptive endoderm | 3.71e-09 | 118 |
digestive system | 3.84e-09 | 116 |
digestive tract | 3.84e-09 | 116 |
primitive gut | 3.84e-09 | 116 |
epithelium of mucosa | 2.48e-08 | 9 |
gastrointestinal system epithelium | 2.48e-08 | 9 |
intestinal epithelium | 2.48e-08 | 9 |
subdivision of digestive tract | 4.54e-08 | 114 |
adult organism | 1.55e-07 | 51 |