Personal tools

FFCP PHASE1:Mm9::chr13:51830064..51830116,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr13:51830064..51830116,- |short_description=p2@Sema4d |description=CAGE_peak_2_at_Sema4d_5end |association_with_transcript=0bp_to_uc007qmn.1_5end |EntrezGene...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:51830064..51830116,-
|DHSsupport=NA
|short_description=p2@Sema4d
|DPIdataset=NA
|description=CAGE_peak_2_at_Sema4d_5end
|association_with_transcript=0bp_to_uc007qmn.1_5end
|EntrezGene=20354
|EntrezGene=20354
|HGNC=
|HGNC=
|MCL_coexpression_id=116
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc007qmn.1_5end
|cluster_id=chr13:51830064..51830116,-
|description=CAGE_peak_2_at_Sema4d_5end
|id=chr13:51830064..51830116,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000049,8.97e-08,19
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001474!2.98e-10!22;UBERON:0004765!2.98e-10!22;UBERON:0001434!2.98e-10!22;UBERON:0002371!1.43e-09!16;UBERON:0007023!1.92e-08!51;UBERON:0002204!2.51e-07!32
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.26e-12,22;UBERON:0004765,1.26e-12,22;UBERON:0001434,1.26e-12,22;UBERON:0002371,7.92e-12,16;UBERON:0002204,1.80e-10,32;UBERON:0007023,4.74e-08,51;UBERON:0002193,6.71e-07,48;UBERON:0002405,6.71e-07,48
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.422366166455,0,0,0,0.171200729931206,0,4.66353666541928,5.26435695213547,1.39912375625629,23.9751245672261,24.13214031461,24.1902101524877,1.02051948181284,4.96454756004426,1.56719873483361,19.9990528491758,19.0409703285751,0,0,0.215471232685889,0.380046838912748,0.756090389279792,0.665191531965914,0,0.61506478758457,0,0,0,0,153.601108480445,57.0374801502374,93.1872264273361,214.70449313132,178.957917059113,171.870664973028,0,0,0,0.782391344348039,0,0,0,0,0,16.6104779997159,0.725362142011344,1.34437519656986,0.257259436035947,0.286533439938757,0,0,0,0,0,0,102.588567770079,123.608295320872,111.545378046538,33.5552123780613,18.4424786554346,0.207379224616955,0,0,0.571301968807607,0.883474163806454,0.367472397644862,0.287536413054709,0.919218786610021,0,1.27687338085188,0.921639199537461,0,0.0914876436024097,0,0.558365998002762,1.68828783009504,1.37518422999129,1.47314292736834,0.854230084794618,0.372798891650601,0.302904773332736,0,0,1.72084775396277,0,0,0,0,3.23022166303029,0,0,0,0.14084341977668,0,0,0,0,0,0,2.05530983494308,12.1700805314171,6.67989625791711,0.867426633830679,0.608930956624282,0,0.60289056221049,0.470354828542819,0.753999547978053,0.494389935468748,1.3013942122792,26.5383165584962,10.8383789464764,13.6921741445444,13.091631834651,1.86391761218122,0.878342391034642,0.209446706813455,4.34276993854605,2.63593273913025,2.39961092397363,2.03312363316904,0.599162557619291,1.37250180845588,0.125654352112864,2.08589184230732,1.02286182932132,1.45451631191692,1.62241263067758,0.101839363850316,18.5366386209039,1.76905930903572,3.36706969418358,0.260240885925407,0,0.360124259610698,0,0.204109497453984,0.768682321709099,0.843315521037559,1.03481348295606,0,0.189106080167819,0,0,0.834141747676794,2.78601733217733,1.64625709126355,0.398068533636986,3.51106593656617,2.57347907114715,1.42081749697796,0,0.234526059981096,0,0.473489471170421,0.590292695242212,0.308534225774757,0,0.536546802799238,0.233530684734339,0.16455984991348,0.656669856316381,0.486412857275134,0.584799949701329,1.3173006917463,0.671032093801859,3.15434922846191,0.205809224758569,1.32167513193519,0.793351699990633,0.426576501070468,0,0.644337306610467,0.403367049246685,0.444756087689741,0.760902504450237,2.37264530772256,0.494096864172033,1.50801125280162,0.795825888164603,2.72949721966768,0.898819408654221,2.59365659849633,3.38540164532424,0,0.456994050438915,0,0,0.193952487167626,0.280543279561274,0.822074982615345,0.885660887877613,1.255989822731,0.987177311374404,0.296452627087149,0.166845105716094,0.196558995113203,0.674586337154561,1.01430060694251,1.4470629585145,1.01850340712568,1.43848068725405,0.810676133875177,0.274561413188081,0,2.97712758134803,1.5601883655728,0.505157755894224,0.358794827043824,0.482443521363367,7.57488079683079,0.189491411770485,0.325929952884052,0.848725428875941,0.234690248288502,0.502518772325447,0.476087281772027,0.780534591431195,3.15270288212382,2.87904096543407,2.23236676120482,5.73521601505083,11.569893785015,3.90552458170081,162.854586654414,155.557025572151,2.45882136509518,3.31124095565679,2.24770825982909,0.35163505977661,0,1.51482556322624,0.315508219416257,0,0,0,0,0,0,0,0,1.28528526568723,2.83880170416537,0.534196811001766,0.488660878060728,5.1140738121486,1.32745138339963,0.242780636154981,0.906970670894253,0.754420319023592,0.590603785761546,0.922305443831782,1.29214146584111,0.727067458955011,0,1.26414703174326,1.05418608574999,1.03135543248187,1.36175842301515,0.18006109403131,0.646793418913773,0.428674070063185,0.709360934569094,0.891844088010353,0.329098041204242,1.2178597964584,2.3467170806371,0.42366414172764,0.441056796109924,0.32977250588296,0.322928853391811,0.361877549568935,0.477489376012546,0.492422699235184,3.49777003955821,1.66882771809459,8.20180227829693,4.54051109519089,8.88933731374616,5.65105371014073,10.935538217682,16.4720284708696,2.71965487990169,1.6794174278839,2.3493995546752,2.86401185404534,0.316335993581135,0.813277868507395,0,0.418176592028937,0.436725127492355,0.404593039154462,0.495920734352016,1.04702376793612,1.42576470620972,1.24267862617385,0,0.149516546043979,0.165458490457098,0.972255941720238,0.645799117388655,0.844780627453891,0.352071715937262,0,0.104859344425711,0,0,2.52808896502543,1.82452693761148,0.616265742988964,0.389762468933385,0.716106782669926,0.596044064343795,0.721172697119813,0.738447635872886,0.706765149637033,0.457240839929999,0.806609481094724,1.07203668813728,1.73181314952593,0.818138315270983,0.453460767230423,0,0,0,1.73870634628971,3.19060208267009,4.57879060668163,3.42989406526505,1.50471631210609,0.564751842617067,0.460325236507177,1.14579102687879,0.515559547031063,0,1.5107877947794,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0.103787347584177,0.399024873401031,0.170733605754134,0.972426868273176,0,0.183843508450014,1.77797382241292,0.618105171716683,1.92551525755089,2.02157769411038,1.2673964994512,0.943131706930381,1.03005658216871,1.47257850531199,1.20614484806788,1.42888107384922,1.27472758539341,0.964546102318525,0.412085900803307,1.03039244094078,1.02860775715625,0.887379030796687,1.1921809497366,0.872078499793971,1.12931256498397,1.09998990259179,1.46342378298218,1.31534855718921,0.814824683075171,2.24456908663095,1.18635018124174,0.591026894253381,0.818462086339379,1.23949472948773,1.54325288784913,2.74791635731741,2.33931608445408,2.57845264857958,3.25190164517034,4.41182838239031,6.4922993973718
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.422366166455,0,0,0,0.171200729931206,0,4.66353666541928,5.26435695213547,1.39912375625629,23.9751245672261,24.13214031461,24.1902101524877,1.02051948181284,4.96454756004426,1.56719873483361,19.9990528491758,19.0409703285751,0,0,0.215471232685889,0.380046838912748,0.756090389279792,0.665191531965914,0,0.61506478758457,0,0,0,0,153.601108480445,57.0374801502374,93.1872264273361,214.70449313132,178.957917059113,171.870664973028,0,0,0,0.782391344348039,0,0,0,0,0,16.6104779997159,0.725362142011344,1.34437519656986,0.257259436035947,0.286533439938757,0,0,0,0,0,0,102.588567770079,123.608295320872,111.545378046538,33.5552123780613,18.4424786554346,0.207379224616955,0,0,0.571301968807607,0.883474163806454,0.367472397644862,0.287536413054709,0.919218786610021,0,1.27687338085188,0.921639199537461,0,0.0914876436024097,0,0.558365998002762,1.68828783009504,1.37518422999129,1.47314292736834,0.854230084794618,0.372798891650601,0.302904773332736,0,0,1.72084775396277,0,0,0,0,3.23022166303029,0,0,0,0.14084341977668,0,0,0,0,0,0,2.05530983494308,12.1700805314171,6.67989625791711,0.867426633830679,0.608930956624282,0,0.60289056221049,0.470354828542819,0.753999547978053,0.494389935468748,1.3013942122792,26.5383165584962,10.8383789464764,13.6921741445444,13.091631834651,1.86391761218122,0.878342391034642,0.209446706813455,4.34276993854605,2.63593273913025,2.39961092397363,2.03312363316904,0.599162557619291,1.37250180845588,0.125654352112864,2.08589184230732,1.02286182932132,1.45451631191692,1.62241263067758,0.101839363850316,18.5366386209039,1.76905930903572,3.36706969418358,0.260240885925407,0,0.360124259610698,0,0.204109497453984,0.768682321709099,0.843315521037559,1.03481348295606,0,0.189106080167819,0,0,0.834141747676794,2.78601733217733,1.64625709126355,0.398068533636986,3.51106593656617,2.57347907114715,1.42081749697796,0,0.234526059981096,0,0.473489471170421,0.590292695242212,0.308534225774757,0,0.536546802799238,0.233530684734339,0.16455984991348,0.656669856316381,0.486412857275134,0.584799949701329,1.3173006917463,0.671032093801859,3.15434922846191,0.205809224758569,1.32167513193519,0.793351699990633,0.426576501070468,0,0.644337306610467,0.403367049246685,0.444756087689741,0.760902504450237,2.37264530772256,0.494096864172033,1.50801125280162,0.795825888164603,2.72949721966768,0.898819408654221,2.59365659849633,3.38540164532424,0,0.456994050438915,0,0,0.193952487167626,0.280543279561274,0.822074982615345,0.885660887877613,1.255989822731,0.987177311374404,0.296452627087149,0.166845105716094,0.196558995113203,0.674586337154561,1.01430060694251,1.4470629585145,1.01850340712568,1.43848068725405,0.810676133875177,0.274561413188081,0,2.97712758134803,1.5601883655728,0.505157755894224,0.358794827043824,0.482443521363367,7.57488079683079,0.189491411770485,0.325929952884052,0.848725428875941,0.234690248288502,0.502518772325447,0.476087281772027,0.780534591431195,3.15270288212382,2.87904096543407,2.23236676120482,5.73521601505083,11.569893785015,3.90552458170081,162.854586654414,155.557025572151,2.45882136509518,3.31124095565679,2.24770825982909,0.35163505977661,0,1.51482556322624,0.315508219416257,0,0,0,0,0,0,0,0,1.28528526568723,2.83880170416537,0.534196811001766,0.488660878060728,5.1140738121486,1.32745138339963,0.242780636154981,0.906970670894253,0.754420319023592,0.590603785761546,0.922305443831782,1.29214146584111,0.727067458955011,0,1.26414703174326,1.05418608574999,1.03135543248187,1.36175842301515,0.18006109403131,0.646793418913773,0.428674070063185,0.709360934569094,0.891844088010353,0.329098041204242,1.2178597964584,2.3467170806371,0.42366414172764,0.441056796109924,0.32977250588296,0.322928853391811,0.361877549568935,0.477489376012546,0.492422699235184,3.49777003955821,1.66882771809459,8.20180227829693,4.54051109519089,8.88933731374616,5.65105371014073,10.935538217682,16.4720284708696,2.71965487990169,1.6794174278839,2.3493995546752,2.86401185404534,0.316335993581135,0.813277868507395,0,0.418176592028937,0.436725127492355,0.404593039154462,0.495920734352016,1.04702376793612,1.42576470620972,1.24267862617385,0,0.149516546043979,0.165458490457098,0.972255941720238,0.645799117388655,0.844780627453891,0.352071715937262,0,0.104859344425711,0,0,2.52808896502543,1.82452693761148,0.616265742988964,0.389762468933385,0.716106782669926,0.596044064343795,0.721172697119813,0.738447635872886,0.706765149637033,0.457240839929999,0.806609481094724,1.07203668813728,1.73181314952593,0.818138315270983,0.453460767230423,0,0,0,1.73870634628971,3.19060208267009,4.57879060668163,3.42989406526505,1.50471631210609,0.564751842617067,0.460325236507177,1.14579102687879,0.515559547031063,0,1.5107877947794,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0.103787347584177,0.399024873401031,0.170733605754134,0.972426868273176,0,0.183843508450014,1.77797382241292,0.618105171716683,1.92551525755089,2.02157769411038,1.2673964994512,0.943131706930381,1.03005658216871,1.47257850531199,1.20614484806788,1.42888107384922,1.27472758539341,0.964546102318525,0.412085900803307,1.03039244094078,1.02860775715625,0.887379030796687,1.1921809497366,0.872078499793971,1.12931256498397,1.09998990259179,1.46342378298218,1.31534855718921,0.814824683075171,2.24456908663095,1.18635018124174,0.591026894253381,0.818462086339379,1.23949472948773,1.54325288784913,2.74791635731741,2.33931608445408,2.57845264857958,3.25190164517034,4.41182838239031,6.4922993973718
|short_description=p2@Sema4d
}}
}}

Latest revision as of 17:26, 1 October 2015

Short description:p2@Sema4d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sema4d_5end
Coexpression cluster:MCL_coexpression_mm9:116
Association with transcript: 0bp_to_uc007qmn.1_5end
EntrezGene:Sema4d
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sema4d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.98
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.13
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D120.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.04
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8153.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H157.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H393.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9214.70
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2178.96
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4171.87
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.61
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7102.59
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7123.61
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2111.55
Mouse Microglia, donor1.CNhs12629.11718-123C833.56
Mouse Microglia, donor2.CNhs12634.11736-123E818.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H912.17
adrenal gland, adult.CNhs10508.49-24D76.68
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G226.54
bone (os femoris), neonate N02.CNhs11227.1985-43F510.84
bone (os femoris), neonate N16.CNhs11225.1525-43A613.69
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.54
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B17.57
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C711.57
lung, neonate N30.CNhs11133.1394-42H23.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1162.85
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1155.56
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G65.11
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G28.20
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F28.89
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H110.94
spleen, neonate N25.CNhs11099.1354-25G316.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E54.58
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D14.41
whole body, neonate N10.CNhs10518.761-6B46.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
common myeloid progenitor8.97e-0819

Uber anatomy
Ontology termp-valuen
bone element1.26e-1222
skeletal element1.26e-1222
skeletal system1.26e-1222
bone marrow7.92e-1216
musculoskeletal system1.80e-1032
adult organism4.74e-0851
hemolymphoid system6.71e-0748
immune system6.71e-0748
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:51830064..51830116,-&oldid=4313905"