FFCP PHASE1:Hg19::chr6:117747221..117747255,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=6098 | |EntrezGene=6098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=10261 | |HGNC=10261 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q5H8Y1,P08922 | |UniProt=Q5H8Y1,P08922 | ||
|association_with_transcript=-203bp_to_ENST00000368507,ENST00000368508,NM_002944,uc003pxp.1,uc011ebi.1_5end | |association_with_transcript=-203bp_to_ENST00000368507,ENST00000368508,NM_002944,uc003pxp.1,uc011ebi.1_5end | ||
|cluster_id=chr6:117747221..117747255,- | |||
|coexpression_cluster_id=C39 | |coexpression_cluster_id=C39 | ||
|description=CAGE_peak_4_at_ROS1_5end | |description=CAGE_peak_4_at_ROS1_5end | ||
Latest revision as of 01:58, 20 September 2015
| Short description: | p4@ROS1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_ROS1_5end |
| Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
| Association with transcript: | -203bp_to_ENST00000368507, ENST00000368508, NM_002944, uc003pxp.1, uc011ebi.1_5end |
| EntrezGene: | ROS1 |
| HGNC: | 10261 |
| UniProt: | Q5H8Y1P08922 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@ROS1 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neocortex | 1.91e-49 | 20 |
| regional part of cerebral cortex | 4.02e-45 | 22 |
| gyrus | 5.56e-44 | 6 |
| cerebral cortex | 6.99e-40 | 25 |
| pallium | 6.99e-40 | 25 |
| middle frontal gyrus | 6.00e-34 | 2 |
| middle temporal gyrus | 1.39e-33 | 2 |
| regional part of telencephalon | 2.37e-31 | 32 |
| cerebral hemisphere | 2.37e-31 | 32 |
| brain grey matter | 1.54e-29 | 34 |
Showing 1 to 10 of 63 entries
