FFCP PHASE1:Hg19::chr6:146285221..146285246,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=257218 | |EntrezGene=257218 | ||
| Line 8: | Line 8: | ||
|UniProt=Q149N8,B3KX98 | |UniProt=Q149N8,B3KX98 | ||
|association_with_transcript=0bp_to_ENST00000275233,ENST00000367503,ENST00000438092,NM_001042683,NM_173082,uc003qld.2,uc003qle.2,uc003qlf.2_5end | |association_with_transcript=0bp_to_ENST00000275233,ENST00000367503,ENST00000438092,NM_001042683,NM_173082,uc003qld.2,uc003qle.2,uc003qlf.2_5end | ||
|cluster_id=chr6:146285221..146285246,- | |||
|description=CAGE_peak_2_at_SHPRH_5end | |description=CAGE_peak_2_at_SHPRH_5end | ||
|id=chr6:146285221..146285246,- | |id=chr6:146285221..146285246,- | ||
Latest revision as of 22:43, 15 September 2015
| Short description: | p2@SHPRH |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_SHPRH_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000275233, ENST00000367503, ENST00000438092, NM_001042683, NM_173082, uc003qld.2, uc003qle.2, uc003qlf.2_5end |
| EntrezGene: | SHPRH |
| HGNC: | 19336 |
| UniProt: | Q149N8B3KX98 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@SHPRH |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 3.64e-23 | 168 |
| hematopoietic oligopotent progenitor cell | 4.27e-22 | 161 |
| hematopoietic multipotent progenitor cell | 4.27e-22 | 161 |
| hematopoietic cell | 1.05e-20 | 177 |
| leukocyte | 1.18e-18 | 136 |
| hematopoietic lineage restricted progenitor cell | 5.75e-18 | 120 |
| nongranular leukocyte | 2.28e-15 | 115 |
| myeloid cell | 2.25e-13 | 108 |
| common myeloid progenitor | 2.25e-13 | 108 |
| granulocyte monocyte progenitor cell | 1.31e-10 | 67 |
Showing 1 to 10 of 21 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.71e-23 | 114 |
| neural tube | 1.52e-19 | 56 |
| neural rod | 1.52e-19 | 56 |
| future spinal cord | 1.52e-19 | 56 |
| neural keel | 1.52e-19 | 56 |
| regional part of nervous system | 9.67e-18 | 53 |
| regional part of brain | 9.67e-18 | 53 |
| regional part of forebrain | 1.33e-17 | 41 |
| forebrain | 1.33e-17 | 41 |
| anterior neural tube | 1.33e-17 | 41 |
Showing 1 to 10 of 35 entries
