FFCP PHASE1:Hg19::chr6:155054797..155054839,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=22828 | |EntrezGene=22828 | ||
| Line 8: | Line 8: | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-141bp_to_uc010kji.2_5end | |association_with_transcript=-141bp_to_uc010kji.2_5end | ||
|cluster_id=chr6:155054797..155054839,+ | |||
|description=CAGE_peak_2_at_SCAF8_5end | |description=CAGE_peak_2_at_SCAF8_5end | ||
|id=chr6:155054797..155054839,+ | |id=chr6:155054797..155054839,+ | ||
Latest revision as of 08:43, 16 September 2015
| Short description: | p2@SCAF8 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_SCAF8_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -141bp_to_uc010kji.2_5end |
| EntrezGene: | SCAF8 |
| HGNC: | 20959 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@SCAF8 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 3.41e-25 | 136 |
| hematopoietic stem cell | 1.10e-24 | 168 |
| hematopoietic oligopotent progenitor cell | 1.06e-22 | 161 |
| hematopoietic multipotent progenitor cell | 1.06e-22 | 161 |
| myeloid leukocyte | 2.87e-21 | 72 |
| myeloid cell | 4.29e-21 | 108 |
| common myeloid progenitor | 4.29e-21 | 108 |
| hematopoietic cell | 4.69e-21 | 177 |
| hematopoietic lineage restricted progenitor cell | 3.58e-19 | 120 |
| granulocyte monocyte progenitor cell | 1.48e-18 | 67 |
Showing 1 to 10 of 26 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 1.80e-17 | 98 |
| blood island | 1.80e-17 | 98 |
| adult organism | 3.84e-16 | 114 |
| hemolymphoid system | 6.07e-16 | 108 |
| bone element | 2.86e-15 | 82 |
| bone marrow | 5.08e-15 | 76 |
| immune system | 3.40e-13 | 93 |
| skeletal element | 2.60e-12 | 90 |
| skeletal system | 1.37e-10 | 100 |
Showing 1 to 9 of 9 entries
