FFCP PHASE1:Mm9::chr15:76734500..76734522,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:76734500..76734522,+
|short_description=p1@Rpl8
|description=CAGE_peak_1_at_Rpl8_5end
|association_with_transcript=0bp_to_ENSMUST00000004072,NM_012053,uc0...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=26961 | |EntrezGene=26961 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=776 | |||
|TSSclassifier=NA | |||
|UniProt=P62918 | |UniProt=P62918 | ||
|association_with_transcript=0bp_to_ENSMUST00000004072,NM_012053,uc007wmt.2_5end | |||
|cluster_id=chr15:76734500..76734522,+ | |||
|description=CAGE_peak_1_at_Rpl8_5end | |||
|id=chr15:76734500..76734522,+ | |||
|ontology_enrichment_celltype=CL:0000144!1.11e-30!121;CL:0000012!1.11e-30!121;CL:0000548!1.20e-30!115;CL:0000004!1.20e-30!115;CL:0000255!1.20e-30!115;CL:0002371!1.62e-29!118;CL:0000034!1.63e-27!97;CL:0000723!4.35e-25!91;CL:0000048!4.35e-25!91;CL:0000219!5.42e-24!54;CL:0002320!1.85e-21!46;CL:0000134!1.85e-21!46;CL:0000063!5.05e-20!66;CL:0000988!6.82e-18!32;CL:0002032!6.82e-18!32;CL:0000037!6.82e-18!32;CL:0000566!6.82e-18!32;CL:0000837!6.82e-18!32;CL:0002031!4.35e-15!25;CL:0000049!4.98e-11!19;CL:0000738!5.92e-10!17;CL:0002087!5.92e-10!17;CL:0000763!1.69e-09!16;CL:0002321!7.08e-09!70;CL:0000220!7.08e-09!70;CL:0000838!2.32e-08!12;CL:0000055!2.53e-08!50;CL:0000839!5.04e-08!13;CL:0000542!5.95e-08!13;CL:0000051!5.95e-08!13;CL:0000084!1.04e-07!11;CL:0000827!1.04e-07!11;CL:0002319!2.31e-07!43;CL:0000221!2.94e-07!44;CL:0000133!2.94e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.63e-27,97;CL:0000723,4.35e-25,91;CL:0000048,4.35e-25,91;CL:0000219,5.42e-24,54;CL:0002320,1.85e-21,46;CL:0000134,1.85e-21,46;CL:0000988,6.82e-18,32;CL:0002032,6.82e-18,32;CL:0000037,6.82e-18,32;CL:0000837,6.82e-18,32;CL:0002031,4.35e-15,25;CL:0000049,4.98e-11,19;CL:0000738,5.92e-10,17;CL:0002087,5.92e-10,17;CL:0000763,1.69e-09,16;CL:0002321,7.08e-09,70;CL:0000838,2.32e-08,12;CL:0000839,5.04e-08,13;CL:0000542,5.95e-08,13;CL:0000051,5.95e-08,13;CL:0000084,1.04e-07,11;CL:0000827,1.04e-07,11;CL:0002319,2.31e-07,43;CL:0000221,2.94e-07,44;CL:0000133,2.94e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.85e-21!46;UBERON:0002371!7.14e-10!16;UBERON:0002193!1.23e-07!48;UBERON:0002390!3.36e-07!45;UBERON:0003061!3.36e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.85e-21,46;UBERON:0002371,7.14e-10,16;UBERON:0002193,1.23e-07,48;UBERON:0002405,1.23e-07,48;UBERON:0002390,3.36e-07,45;UBERON:0003061,3.36e-07,45 | |||
|phase1_expression=121.552974952539,59.6747947063307,74.1648760204944,106.467402380004,91.1630228502352,149.580431273494,254.404165608527,279.810241897896,630.592686517315,562.222992225428,671.859307316882,314.621395077607,602.968970817707,345.835111969554,405.727689891477,321.328249347654,525.370970474238,457.262408686766,390.227678041933,447.306692995124,61.0610823284681,262.922438779944,585.087527671215,222.389467682835,236.062150218118,122.311408356499,178.766228406016,129.498210844219,196.104168878978,160.039132397556,157.428662565266,306.084784607542,373.344326063834,301.115193929334,206.24005650241,285.092416789814,217.644533775685,81.1951363629601,141.421697358808,109.416462490524,49.9996764826362,46.4470929771743,74.7685943667977,91.149296214318,123.679856087808,192.724089769766,662.685468662789,410.759394620761,140.818843132796,180.042086542786,393.781804032145,563.510052310689,626.33246841353,801.525166922536,738.398076715993,367.366474659332,343.553594486569,256.289029861889,178.038485556446,221.647220314982,389.8063131563,501.489907462316,836.826403140582,430.152064860509,416.312738640696,506.572321956569,402.362948426218,428.403410433533,158.334037995045,182.798040501109,192.447339636515,202.812198926701,231.028493835388,177.366677263253,157.857490767035,444.90189271925,137.644851249236,98.7023123398501,107.831786345883,160.241839592186,128.906089835795,128.144689156963,171.418361386848,182.897848260296,125.447361424761,133.466749219571,143.937769287893,132.902804873439,223.013639366227,133.232660468263,149.280211681364,201.339187213644,236.630024130297,143.021345784022,113.061096635894,120.071205742086,103.367093216969,196.335731609923,343.437098084992,554.036452832214,131.829440910973,261.786013925208,147.787039029854,127.9920065676,416.961744987598,411.96314126251,489.853187219325,56.9777559798109,128.17425240535,73.6273009761531,174.1792680732,98.9512804514459,109.081130202116,88.6249126449421,68.2014501387088,77.6619534417394,86.2710437392965,42.8014096482938,80.4995602274386,95.7659751688662,84.1406185334099,81.9439177798525,149.113408974498,43.331557957709,31.2075593152048,98.3509662553077,315.353407699582,667.091836864669,284.637308643665,63.9606030258593,77.3176018763479,92.3559488029553,42.7607827673,37.5901722275586,82.9074297792645,58.893578493596,136.362908195574,95.1713325167212,157.699001262613,69.0249287307635,108.130088102007,245.765349639383,209.592319093427,101.725752039108,58.6474622684446,51.1173743936551,85.6433762475921,35.9597685327232,261.268407434605,164.333183665835,183.341071378835,258.212572799683,89.5312142506425,168.902300763251,102.891068203972,142.309500775223,377.79069477452,533.739559355919,262.851236940923,166.114869573473,70.8268701142911,127.303877452938,143.467309764637,91.4953677625428,84.2298436365085,86.2700935024013,99.7977053206583,84.4213425314635,86.3939212045772,53.1902583616269,47.1009783461422,49.5617957371877,61.6935823967852,62.4059847235729,50.8901675525188,67.8141395579484,46.5890484007155,120.325007831913,136.50448034255,135.626216366496,165.336952876246,156.90978215696,165.894020708273,128.212071999865,83.9916438933786,118.25384949184,75.9032330576814,69.8337216864439,69.0172868401685,65.6138168317582,67.2189335110299,69.1020218192654,260.603695909534,123.045648080678,161.172062012505,111.193625003542,120.638447018263,92.6494180751108,60.960021787784,44.5782646898398,53.5365661939088,73.4213125334713,92.7896722782776,218.900778699515,184.372337416184,221.039456474311,180.748368157156,191.494664843419,168.307688027518,190.454842992437,89.8229156333696,102.960529945531,23.0029130443767,56.5654240456125,60.8473462573393,52.7889854909464,61.8921076650597,59.8229966490575,91.8223355128025,263.014079537433,186.757863002562,121.028246157709,110.773797192173,165.16116983763,164.488155852236,106.738105378216,49.8127055375564,44.0714732401062,62.9846336197074,61.7764696478332,60.2670586711976,75.3621595209675,389.041512563322,285.550484004823,134.251646534197,134.1052587041,62.1330783252755,45.8297694575514,279.836951757985,82.8104641230343,281.433331719301,255.346938770002,168.461097027049,241.836423527983,212.104337726439,200.418183798493,257.864416966908,221.529940296774,204.363781198353,67.4774764485795,114.119828507448,168.271995465556,133.567306669932,92.3832688646199,262.835373913126,171.888690397727,188.952223102969,142.962650454971,299.731421273984,234.880453029161,106.730885078475,112.695456138027,119.426621758882,140.952394039374,171.832331977248,170.173646359508,144.346392839606,136.306248181702,156.135931325785,162.467472553947,163.153014950892,144.657111075279,102.020392773315,170.195906555061,108.418329125434,74.9885530857923,131.214396842702,113.60662827668,80.247820067865,80.5780677040162,101.705237090672,83.8759997697263,67.6235540981254,57.481843623258,156.859468572429,147.153836857778,112.968661695524,106.42817820765,90.6282729790397,124.226548051142,213.152951212295,201.390139893744,203.292161466307,143.200592702267,173.19395648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| ||
|short_description=p1@Rpl8 | |||
}} | }} |
Latest revision as of 01:10, 27 September 2015
Short description: | p1@Rpl8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rpl8_5end |
Coexpression cluster: | MCL_coexpression_mm9:776 |
Association with transcript: | 0bp_to_ENSMUST00000004072, NM_012053, uc007wmt.2_5end |
EntrezGene: | Rpl8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.63e-27 | 97 |
somatic stem cell | 4.35e-25 | 91 |
multi fate stem cell | 4.35e-25 | 91 |
motile cell | 5.42e-24 | 54 |
connective tissue cell | 1.85e-21 | 46 |
mesenchymal cell | 1.85e-21 | 46 |
hematopoietic cell | 6.82e-18 | 32 |
hematopoietic oligopotent progenitor cell | 6.82e-18 | 32 |
hematopoietic stem cell | 6.82e-18 | 32 |
hematopoietic multipotent progenitor cell | 6.82e-18 | 32 |
hematopoietic lineage restricted progenitor cell | 4.35e-15 | 25 |
common myeloid progenitor | 4.98e-11 | 19 |
leukocyte | 5.92e-10 | 17 |
nongranular leukocyte | 5.92e-10 | 17 |
myeloid cell | 1.69e-09 | 16 |
embryonic cell | 7.08e-09 | 70 |
lymphoid lineage restricted progenitor cell | 2.32e-08 | 12 |
myeloid lineage restricted progenitor cell | 5.04e-08 | 13 |
lymphocyte | 5.95e-08 | 13 |
common lymphoid progenitor | 5.95e-08 | 13 |
T cell | 1.04e-07 | 11 |
pro-T cell | 1.04e-07 | 11 |
neural cell | 2.31e-07 | 43 |
ectodermal cell | 2.94e-07 | 44 |
neurectodermal cell | 2.94e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.85e-21 | 46 |
bone marrow | 7.14e-10 | 16 |
hemolymphoid system | 1.23e-07 | 48 |
immune system | 1.23e-07 | 48 |
hematopoietic system | 3.36e-07 | 45 |
blood island | 3.36e-07 | 45 |