FFCP PHASE1:Mm9::chr16:32165540..32165580,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:32165540..32165580,-
|short_description=p1@Lrrc33
|description=CAGE_peak_1_at_Lrrc33_5end
|association_with_transcript=0bp_to_ENSMUST00000115163,ENSMUST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=224109 | |EntrezGene=224109 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1599 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BMT4,D3Z2Y0 | |UniProt=Q8BMT4,D3Z2Y0 | ||
|association_with_transcript=0bp_to_ENSMUST00000115163,ENSMUST00000127287,ENSMUST00000136809,ENSMUST00000143682,ENSMUST00000144345,NM_146069,uc007yyh.1,uc007yyi.1,uc007yyj.1_5end | |||
|cluster_id=chr16:32165540..32165580,- | |||
|description=CAGE_peak_1_at_Lrrc33_5end | |||
|id=chr16:32165540..32165580,- | |||
|ontology_enrichment_celltype=CL:0000988!1.97e-11!32;CL:0002032!1.97e-11!32;CL:0000037!1.97e-11!32;CL:0000566!1.97e-11!32;CL:0000837!1.97e-11!32;CL:0002031!1.00e-08!25;CL:0000738!2.46e-08!17;CL:0002087!2.46e-08!17;CL:0002320!5.84e-07!46;CL:0000134!5.84e-07!46;CL:0000838!9.18e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.80e-11,32;CL:0002032,1.80e-11,32;CL:0000037,1.80e-11,32;CL:0000837,1.80e-11,32;CL:0002031,9.22e-09,25;CL:0000738,2.42e-08,17;CL:0002087,2.42e-08,17;CL:0002320,4.96e-07,46;CL:0000134,4.96e-07,46;CL:0000838,9.06e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!8.52e-19!70;UBERON:0002390!2.20e-18!45;UBERON:0003061!2.20e-18!45;UBERON:0002193!7.42e-18!48;UBERON:0000926!6.93e-12!193;UBERON:0004120!6.93e-12!193;UBERON:0006603!6.93e-12!193;UBERON:0001041!9.56e-11!92;UBERON:0002371!1.44e-10!16;UBERON:0005057!3.18e-10!51;UBERON:0000077!3.86e-10!97;UBERON:0003081!7.07e-10!88;UBERON:0001474!1.92e-09!22;UBERON:0004765!1.92e-09!22;UBERON:0001434!1.92e-09!22;UBERON:0003104!3.16e-09!131;UBERON:0009142!3.16e-09!131;UBERON:0004177!3.58e-09!29;UBERON:0001004!1.39e-07!42;UBERON:0000065!1.79e-07!41;UBERON:0002384!5.84e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.68e-18,45;UBERON:0003061,1.68e-18,45;UBERON:0002193,5.75e-18,48;UBERON:0002405,5.75e-18,48;UBERON:0001041,1.12e-10,80;UBERON:0002371,1.41e-10,16;UBERON:0003081,1.50e-09,87;UBERON:0001474,2.49e-09,22;UBERON:0004765,2.49e-09,22;UBERON:0001434,2.49e-09,22;UBERON:0004177,2.92e-09,29;UBERON:0005057,2.92e-09,29;UBERON:0000077,3.30e-08,35;UBERON:0001004,1.03e-07,42;UBERON:0000065,1.33e-07,41;UBERON:0002384,4.96e-07,46;UBERON:0000926,7.63e-07,120;UBERON:0004120,7.63e-07,120;UBERON:0006603,7.63e-07,120;UBERON:0003408,8.72e-07,24 | |||
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| ||
|short_description=p1@Lrrc33 | |||
}} | }} |
Latest revision as of 21:18, 1 October 2015
Short description: | p1@Lrrc33 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lrrc33_5end |
Coexpression cluster: | MCL_coexpression_mm9:1599 |
Association with transcript: | 0bp_to_ENSMUST00000115163, ENSMUST00000127287, ENSMUST00000136809, ENSMUST00000143682, ENSMUST00000144345, NM_146069, uc007yyh.1, uc007yyi.1, uc007yyj.1_5end |
EntrezGene: | Lrrc33 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.80e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.80e-11 | 32 |
hematopoietic stem cell | 1.80e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.80e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 9.22e-09 | 25 |
leukocyte | 2.42e-08 | 17 |
nongranular leukocyte | 2.42e-08 | 17 |
connective tissue cell | 4.96e-07 | 46 |
mesenchymal cell | 4.96e-07 | 46 |
lymphoid lineage restricted progenitor cell | 9.06e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.68e-18 | 45 |
blood island | 1.68e-18 | 45 |
hemolymphoid system | 5.75e-18 | 48 |
immune system | 5.75e-18 | 48 |
foregut | 1.12e-10 | 80 |
bone marrow | 1.41e-10 | 16 |
lateral plate mesoderm | 1.50e-09 | 87 |
bone element | 2.49e-09 | 22 |
skeletal element | 2.49e-09 | 22 |
skeletal system | 2.49e-09 | 22 |
hemopoietic organ | 2.92e-09 | 29 |
immune organ | 2.92e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 3.30e-08 | 35 |
respiratory system | 1.03e-07 | 42 |
respiratory tract | 1.33e-07 | 41 |
connective tissue | 4.96e-07 | 46 |
mesoderm | 7.63e-07 | 120 |
mesoderm-derived structure | 7.63e-07 | 120 |
presumptive mesoderm | 7.63e-07 | 120 |
gland of gut | 8.72e-07 | 24 |