Personal tools

FFCP PHASE1:Mm9::chr17:25393219..25393238,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr17:25393219..25393238,- |short_description=p1@Baiap3 |description=CAGE_peak_1_at_Baiap3_5end |association_with_transcript=70bp_to_ENSMUST00000056357,ENSMUST0...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr17:25393219..25393238,-
|DHSsupport=NA
|short_description=p1@Baiap3
|DPIdataset=NA
|description=CAGE_peak_1_at_Baiap3_5end
|association_with_transcript=70bp_to_ENSMUST00000056357,ENSMUST00000169109,NM_001163270,uc012and.1_5end
|EntrezGene=545192
|EntrezGene=545192
|HGNC=
|HGNC=
|MCL_coexpression_id=556
|TSSclassifier=NA
|UniProt=Q80TT2,E9Q350,B2RY68
|UniProt=Q80TT2,E9Q350,B2RY68
|association_with_transcript=70bp_to_ENSMUST00000056357,ENSMUST00000169109,NM_001163270,uc012and.1_5end
|cluster_id=chr17:25393219..25393238,-
|description=CAGE_peak_1_at_Baiap3_5end
|id=chr17:25393219..25393238,-
|ontology_enrichment_celltype=CL:0000117!5.08e-07!23;CL:0000337!5.08e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,7.85e-08,23;CL:0000337,7.85e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.21e-10!71;UBERON:0003075!6.21e-10!71;UBERON:0007284!6.21e-10!71;UBERON:0001049!3.50e-09!52;UBERON:0005068!3.50e-09!52;UBERON:0006241!3.50e-09!52;UBERON:0007135!3.50e-09!52;UBERON:0000955!2.07e-08!50;UBERON:0006238!2.07e-08!50;UBERON:0002616!5.10e-08!49;UBERON:0007811!6.88e-08!86;UBERON:0001894!3.21e-07!10;UBERON:0006222!3.21e-07!10;UBERON:0000153!3.30e-07!94;UBERON:0001017!3.86e-07!73;UBERON:0005743!3.86e-07!73;UBERON:0003080!9.55e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.16e-09,54;UBERON:0001049,1.64e-08,52;UBERON:0005068,1.64e-08,52;UBERON:0006241,1.64e-08,52;UBERON:0007135,1.64e-08,52;UBERON:0001894,2.53e-08,10;UBERON:0006222,2.53e-08,10;UBERON:0001017,4.70e-07,73;UBERON:0001264,5.14e-07,12;UBERON:0000007,9.56e-07,8;UBERON:0003296,9.56e-07,8;UBERON:0010133,9.56e-07,8
|phase1_expression=0.80074423552397,0,0,0,0,5.54001597309236,8.87728034262997,0.516493293766305,0.140788722151667,0.234064526321993,0,0,0.684802919724823,0.174840804837995,0,0.202475267389826,0,0.473193248037357,0.548457734422955,0,5.69790044012167,0,0,1.59992422793407,1.14704640533585,0,0.430761996159075,1.29282739611533,0.950117097281869,1.26015064879965,1.10865255327652,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0.194429899074283,0.139986421625363,0,0,2.90144856804538,5.71359458542189,0,0,0,5.05791152148994,11.1088105647127,5.07065122804943,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,34.849420097264,42.1858913217582,0.61245399607477,0.191690942036473,2.75765635983006,69.3730050296149,32.1772091974673,38.8624529138296,7.12185953743047,8.23388792421687,7.29278718779464,56.1157827992776,136.188551627667,92.2901416571933,20.9186295686304,20.5015220350708,2.98239113320481,0.075726193333184,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0,1.1418387971906,1.8125651855302,13.9535610720935,6.59244241711316,5.78484408793068,2.99800146432876,7.68685466818375,4.35078216402108,4.52399728786832,0,0.289198713839823,0,0,0.220841518460394,0,1.86391761218122,0,0.83778682725382,4.85368404896324,0,0,0,98.861822007183,19.6725259212009,5.52879149296603,9.03886464999838,6.13717097592793,51.94701113989,48.6723789203273,0.203678727700633,0.622034853050465,0,1.05220927943237,0.390361328888111,0.229902104433473,0.180062129805349,1.05493372485001,0.680364991513279,1.66547836370305,0.655912071918102,3.62184719034622,0.431135985865684,0.945530400839096,0.703804496655795,0.657587197282725,0.556094498451196,0,0.411564272815887,1.59227413454795,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0,0,0.405344047729279,0.146199987425332,0,0.268412837520744,5.67782861123144,0.617427674275707,11.5646574044329,0.528901133327089,1.91959425481711,1.39342003116263,2.31961430379768,2.42020229548011,1.55664630691409,1.71203063501303,1.89811624617805,1.15289268306808,2.01068167040216,2.98434708061726,3.50935356814416,1.79763881730844,1.29682829924817,1.7922714592893,0.569003702859245,0.685491075658373,0,0.407302655690628,0.387904974335251,0.771494018793504,2.21327879934901,2.50937251565324,2.04098346193787,1.85095745882701,0.296452627087149,0,0,0,0.202860121388503,0,0.25462585178142,0.575392274901621,0,0.274561413188081,0,0,0,0,0,0.482443521363367,5.72734889516475,0.568474235311454,0,0.169745085775188,0,0.837531287209079,1.19021820443007,1.17080188714679,2.04925687338048,3.10050565508285,3.34855014180723,4.26044618260919,3.28101465545202,5.35201516751593,0,0,0,0.551873492609465,34.1972756673997,37.507739709505,0,0,0.631016438832513,0,0.215423397732799,0,0,0,0,0.584511715822624,1.18586333383957,10.2822821254978,1.13552068166615,1.42452482933804,0.977321756121456,0.824850614862677,5.30980553359851,20.1507928008635,20.5580018736031,18.483297816078,22.4429438589387,12.912276213645,14.7304127105886,15.9954840970102,12.1209108650805,4.74055136903724,2.10837217149998,1.03135543248187,67.0666023334962,3.78128297465751,12.0303575917962,13.0745591369271,34.0493248593165,36.7439764260265,39.491764944509,65.7644290087534,2.3467170806371,0.42366414172764,0,0.32977250588296,0,0.120625849856312,0.119372344003136,0,3.78925087618806,35.0453820799863,1.87957968877638,0.206386867963223,0.370389054739423,0.188368457004691,0,0.457556346413045,0.169978429993855,0.139951452323658,0,2.86401185404534,0.949007980743406,4.26970880966382,0.86404272657441,0.209088296014469,0.87345025498471,1.07891477107857,1.81837602595739,2.09404753587224,0.90730481304255,0,0.56369293868419,0.598066184175915,0.992750942742586,3.88902376688095,1.42075805825504,2.36538575687089,0.58678619322877,0.5208175393758,2.30690557736564,0.483168241652012,0.288030006257865,5.37218905067903,0.405450430580328,1.95150818613172,5.06691209613401,6.98204113103178,17.28527786597,16.7071674832757,18.9042594783459,14.7411016924296,20.347217376885,18.4511918800418,7.21188317474168,6.92725259810372,12.3889516312463,0,0,0.62799699626633,0.167884616364078,0.386379188064381,0.375364950902364,0.73260649706906,0,0,2.82375921308533,2.30162618253588,1.14579102687879,0.859265911718438,0,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,0.103787347584177,0,0.853668028770671,0.243106717068294,0.628839487883947,0.551530525350042,2.889207461421,2.67845574410562,1.60459604795908,2.02157769411038,1.2673964994512,1.13175804831646,2.52832070168682,1.92075457214608,1.09127391015665,1.42888107384922,1.85414921511769,3.27945674788299,3.29668720642645,1.76638704161277,1.71434626192708,2.30718548007139,2.38436189947321,1.16277133305863,1.69396884747595,1.35383372626682,2.56099162021882,2.36762740294059,1.08643291076689,2.80571135828869,1.89816028998679,1.77308068276014,0.818462086339379,1.85924209423159,0.964533054905707,5.74564329257276,0.935726433781634,2.79332370262788,0.956441660344217,2.20591419119516,1.62307484934295
|phase1_expression=0.80074423552397,0,0,0,0,5.54001597309236,8.87728034262997,0.516493293766305,0.140788722151667,0.234064526321993,0,0,0.684802919724823,0.174840804837995,0,0.202475267389826,0,0.473193248037357,0.548457734422955,0,5.69790044012167,0,0,1.59992422793407,1.14704640533585,0,0.430761996159075,1.29282739611533,0.950117097281869,1.26015064879965,1.10865255327652,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0.194429899074283,0.139986421625363,0,0,2.90144856804538,5.71359458542189,0,0,0,5.05791152148994,11.1088105647127,5.07065122804943,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,34.849420097264,42.1858913217582,0.61245399607477,0.191690942036473,2.75765635983006,69.3730050296149,32.1772091974673,38.8624529138296,7.12185953743047,8.23388792421687,7.29278718779464,56.1157827992776,136.188551627667,92.2901416571933,20.9186295686304,20.5015220350708,2.98239113320481,0.075726193333184,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0,1.1418387971906,1.8125651855302,13.9535610720935,6.59244241711316,5.78484408793068,2.99800146432876,7.68685466818375,4.35078216402108,4.52399728786832,0,0.289198713839823,0,0,0.220841518460394,0,1.86391761218122,0,0.83778682725382,4.85368404896324,0,0,0,98.861822007183,19.6725259212009,5.52879149296603,9.03886464999838,6.13717097592793,51.94701113989,48.6723789203273,0.203678727700633,0.622034853050465,0,1.05220927943237,0.390361328888111,0.229902104433473,0.180062129805349,1.05493372485001,0.680364991513279,1.66547836370305,0.655912071918102,3.62184719034622,0.431135985865684,0.945530400839096,0.703804496655795,0.657587197282725,0.556094498451196,0,0.411564272815887,1.59227413454795,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0,0,0.405344047729279,0.146199987425332,0,0.268412837520744,5.67782861123144,0.617427674275707,11.5646574044329,0.528901133327089,1.91959425481711,1.39342003116263,2.31961430379768,2.42020229548011,1.55664630691409,1.71203063501303,1.89811624617805,1.15289268306808,2.01068167040216,2.98434708061726,3.50935356814416,1.79763881730844,1.29682829924817,1.7922714592893,0.569003702859245,0.685491075658373,0,0.407302655690628,0.387904974335251,0.771494018793504,2.21327879934901,2.50937251565324,2.04098346193787,1.85095745882701,0.296452627087149,0,0,0,0.202860121388503,0,0.25462585178142,0.575392274901621,0,0.274561413188081,0,0,0,0,0,0.482443521363367,5.72734889516475,0.568474235311454,0,0.169745085775188,0,0.837531287209079,1.19021820443007,1.17080188714679,2.04925687338048,3.10050565508285,3.34855014180723,4.26044618260919,3.28101465545202,5.35201516751593,0,0,0,0.551873492609465,34.1972756673997,37.507739709505,0,0,0.631016438832513,0,0.215423397732799,0,0,0,0,0.584511715822624,1.18586333383957,10.2822821254978,1.13552068166615,1.42452482933804,0.977321756121456,0.824850614862677,5.30980553359851,20.1507928008635,20.5580018736031,18.483297816078,22.4429438589387,12.912276213645,14.7304127105886,15.9954840970102,12.1209108650805,4.74055136903724,2.10837217149998,1.03135543248187,67.0666023334962,3.78128297465751,12.0303575917962,13.0745591369271,34.0493248593165,36.7439764260265,39.491764944509,65.7644290087534,2.3467170806371,0.42366414172764,0,0.32977250588296,0,0.120625849856312,0.119372344003136,0,3.78925087618806,35.0453820799863,1.87957968877638,0.206386867963223,0.370389054739423,0.188368457004691,0,0.457556346413045,0.169978429993855,0.139951452323658,0,2.86401185404534,0.949007980743406,4.26970880966382,0.86404272657441,0.209088296014469,0.87345025498471,1.07891477107857,1.81837602595739,2.09404753587224,0.90730481304255,0,0.56369293868419,0.598066184175915,0.992750942742586,3.88902376688095,1.42075805825504,2.36538575687089,0.58678619322877,0.5208175393758,2.30690557736564,0.483168241652012,0.288030006257865,5.37218905067903,0.405450430580328,1.95150818613172,5.06691209613401,6.98204113103178,17.28527786597,16.7071674832757,18.9042594783459,14.7411016924296,20.347217376885,18.4511918800418,7.21188317474168,6.92725259810372,12.3889516312463,0,0,0.62799699626633,0.167884616364078,0.386379188064381,0.375364950902364,0.73260649706906,0,0,2.82375921308533,2.30162618253588,1.14579102687879,0.859265911718438,0,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,0.103787347584177,0,0.853668028770671,0.243106717068294,0.628839487883947,0.551530525350042,2.889207461421,2.67845574410562,1.60459604795908,2.02157769411038,1.2673964994512,1.13175804831646,2.52832070168682,1.92075457214608,1.09127391015665,1.42888107384922,1.85414921511769,3.27945674788299,3.29668720642645,1.76638704161277,1.71434626192708,2.30718548007139,2.38436189947321,1.16277133305863,1.69396884747595,1.35383372626682,2.56099162021882,2.36762740294059,1.08643291076689,2.80571135828869,1.89816028998679,1.77308068276014,0.818462086339379,1.85924209423159,0.964533054905707,5.74564329257276,0.935726433781634,2.79332370262788,0.956441660344217,2.20591419119516,1.62307484934295
|short_description=p1@Baiap3
}}
}}

Latest revision as of 02:18, 26 September 2015

Short description:p1@Baiap3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Baiap3_5end
Coexpression cluster:MCL_coexpression_mm9:556
Association with transcript: 70bp_to_ENSMUST00000056357, ENSMUST00000169109, NM_001163270, uc012and.1_5end
EntrezGene:Baiap3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Baiap3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.88
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F134.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D542.19
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D369.37
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F332.18
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D738.86
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.12
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E456.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5136.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I692.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.92
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.50
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D713.95
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F57.69
adrenal gland, neonate N00.CNhs11191.1311-23C14.35
adrenal gland, neonate N25.CNhs11223.1377-27I34.52
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A498.86
corpus striatum, adult.CNhs10487.19-21D819.67
corpus striatum, neonate N00.CNhs11226.630-43F15.53
cortex, adult.CNhs10473.12-14D59.04
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F251.95
diencephalon, neonate N30.CNhs11201.1388-42B248.67
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I311.56
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D52.21
kidney, neonate N20.CNhs11113.832-19I12.51
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B15.73
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A44.26
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H25.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C234.20
medulla oblongata, neonate N30.CNhs11200.1396-42A337.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F420.15
pancreas, embryo E15.CNhs11042.1556-45F220.56
pancreas, embryo E16.CNhs11003.460-26E518.48
pancreas, embryo E17.CNhs10599.1558-45G322.44
pancreas, embryo E18.CNhs10580.1535-43I712.91
pancreas, neonate N00.CNhs11105.645-26G914.73
pancreas, neonate N01.CNhs11138.1531-43D716.00
pancreas, neonate N02.CNhs11139.1539-43D812.12
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G867.07
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C712.03
pituitary gland, embryo E14.CNhs11037.398-44A513.07
pituitary gland, embryo E15.CNhs10592.427-16B934.05
pituitary gland, embryo E16.CNhs11036.449-43F636.74
pituitary gland, embryo E17.CNhs11039.1265-44F539.49
pituitary gland, neonate N00.CNhs11190.1308-22E965.76
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C935.05
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.95
thymus, embryo E16.CNhs11002.456-26C55.07
thymus, embryo E17.CNhs10581.478-18C16.98
thymus, embryo E18.CNhs10595.1273-19G417.29
thymus, neonate N02.CNhs11181.1541-43F816.71
thymus, neonate N03.CNhs11137.2104-43C718.90
thymus, neonate N06.CNhs11197.681-26C414.74
thymus, neonate N07.CNhs11211.713-19D320.35
thymus, neonate N10.CNhs11194.748-24E418.45
thymus, neonate N20.CNhs11186.820-7A27.21
thymus, neonate N25.CNhs11125.1362-25G76.93
thymus, neonate N30.CNhs11132.1393-42G212.39
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.85e-0823
neuroblast (sensu Vertebrata)7.85e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.16e-0954
neural tube1.64e-0852
neural rod1.64e-0852
future spinal cord1.64e-0852
neural keel1.64e-0852
diencephalon2.53e-0810
future diencephalon2.53e-0810
central nervous system4.70e-0773
pancreas5.14e-0712
pituitary gland9.56e-078
gland of diencephalon9.56e-078
neuroendocrine gland9.56e-078
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:25393219..25393238,-&oldid=4227383"