Personal tools

FFCP PHASE1:Mm9::chr17:35841519..35841577,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr17:35841519..35841577,- |short_description=p5@Ddr1 |description=CAGE_peak_5_at_Ddr1_5end |association_with_transcript=0bp_to_ENSMUST00000117301,ENSMUST000001...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr17:35841519..35841577,-
|DHSsupport=NA
|short_description=p5@Ddr1
|DPIdataset=NA
|description=CAGE_peak_5_at_Ddr1_5end
|association_with_transcript=0bp_to_ENSMUST00000117301,ENSMUST00000134995,uc008cim.1_5end
|EntrezGene=12305
|EntrezGene=12305
|HGNC=
|HGNC=
|MCL_coexpression_id=205
|TSSclassifier=NA
|UniProt=Q03146,B0V2H8
|UniProt=Q03146,B0V2H8
|association_with_transcript=0bp_to_ENSMUST00000117301,ENSMUST00000134995,uc008cim.1_5end
|cluster_id=chr17:35841519..35841577,-
|description=CAGE_peak_5_at_Ddr1_5end
|id=chr17:35841519..35841577,-
|ontology_enrichment_celltype=CL:0000221!1.71e-16!44;CL:0000133!1.71e-16!44;CL:0002319!2.28e-16!43;CL:0000540!7.85e-13!33;CL:0000047!7.85e-13!33;CL:0000031!7.85e-13!33;CL:0000404!7.85e-13!33;CL:0000055!1.23e-11!50;CL:0000117!2.05e-09!23;CL:0000337!2.05e-09!23;CL:0000393!4.75e-09!39;CL:0000211!4.75e-09!39;CL:0002453!5.74e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000221,3.62e-20,44;CL:0000133,3.62e-20,44;CL:0002319,5.10e-20,43;CL:0000540,3.30e-15,33;CL:0000047,3.30e-15,33;CL:0000031,3.30e-15,33;CL:0000404,3.30e-15,33;CL:0000117,4.52e-11,23;CL:0000337,4.52e-11,23;CL:0000393,7.83e-11,39;CL:0000211,7.83e-11,39;CL:0002453,4.10e-08,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.14e-21!73;UBERON:0005743!3.14e-21!73;UBERON:0000073!1.11e-19!75;UBERON:0001016!1.11e-19!75;UBERON:0004121!1.39e-19!102;UBERON:0000924!1.39e-19!102;UBERON:0006601!1.39e-19!102;UBERON:0002346!9.95e-18!71;UBERON:0003075!9.95e-18!71;UBERON:0007284!9.95e-18!71;UBERON:0000033!2.45e-14!63;UBERON:0001049!2.35e-12!52;UBERON:0005068!2.35e-12!52;UBERON:0006241!2.35e-12!52;UBERON:0007135!2.35e-12!52;UBERON:0003056!1.43e-11!49;UBERON:0000955!3.14e-11!50;UBERON:0006238!3.14e-11!50;UBERON:0002616!6.07e-11!49;UBERON:0000153!1.99e-08!94;UBERON:0007811!5.24e-08!86;UBERON:0003080!1.06e-07!40;UBERON:0002780!1.45e-07!39;UBERON:0001890!1.45e-07!39;UBERON:0006240!1.45e-07!39;UBERON:0000922!3.73e-07!328;UBERON:0000468!4.51e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.84e-26,73;UBERON:0004121,6.38e-25,95;UBERON:0000924,6.38e-25,95;UBERON:0006601,6.38e-25,95;UBERON:0001016,2.13e-24,75;UBERON:0002346,3.96e-21,64;UBERON:0003075,3.96e-21,64;UBERON:0007284,3.96e-21,64;UBERON:0010314,6.55e-18,92;UBERON:0010371,4.77e-17,73;UBERON:0000073,2.53e-15,54;UBERON:0001049,5.19e-15,52;UBERON:0005068,5.19e-15,52;UBERON:0006241,5.19e-15,52;UBERON:0007135,5.19e-15,52;UBERON:0003056,7.13e-14,49;UBERON:0000955,8.95e-13,47;UBERON:0006238,8.95e-13,47;UBERON:0002616,1.97e-12,46;UBERON:0003080,2.54e-09,40;UBERON:0002780,3.69e-09,39;UBERON:0001890,3.69e-09,39;UBERON:0006240,3.69e-09,39;UBERON:0003076,3.63e-07,12;UBERON:0003057,3.63e-07,12;UBERON:0001894,3.93e-07,10;UBERON:0006222,3.93e-07,10
|phase1_expression=1.28119077683835,0.697950815278722,0,0.90739263392049,0.500895729946347,0.671517087647559,0.700837921786577,0,1.40788722151667,1.17032263160997,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,1.02051948181284,0,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.646413698057667,0.760093677825496,0.756090389279792,1.77384408524244,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,17.2126095756569,24.41881751461,91.1697658348058,50.746203658388,8.53917171914711,18.6878333674463,0,0,0,0.257259436035947,0.85960031981627,0,3.84401275633236,4.23192783417626,3.80298842103708,4.06613438482959,0.889294796111139,0.449949858640699,1.97773272513395,0.7104801149461,45.5392167987975,107.196907184714,5.59923906465779,6.61529097825284,6.09942387919008,4.28476476605705,3.75476519617743,4.40966877173835,3.54628242767475,3.67687514644008,2.20231761998777,2.29837208553338,2.76491759861238,6.19865552331911,4.48289453651807,6.77187381723788,2.79182999001381,1.12552522006336,3.36156145108982,2.94628585473668,2.70506193518296,2.79599168737951,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.280888840263504,1.02258193546835,0.519572009205738,0.70667914902068,1.83096445709685,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0.258937883647172,1.48442139064825,1.38788261412909,1.82679286987285,2.07553947530453,1.20578112442098,1.52865319276416,0.376999773989026,3.21353458054686,0.144599356919912,0,0,0.220841518460394,0,0,2.63502717310392,3.77004072264219,0.510914110417183,0,0,0,1.79748767285787,1.83000241127451,1.63350657746724,1.21677024134594,0.767146371990992,2.0778804455956,4.2182728397617,2.54598409625791,0.373220911830279,0.505445516867349,0.420883711772948,5.72529949035896,7.35686734187113,8.28285797104606,8.43946979880004,9.72921937863988,13.3238269096244,15.3670828277955,5.95017752699736,1.5089759505299,2.26927296201383,2.28736461413134,0.876782929710299,2.22437799380478,1.74126083261083,0.411564272815887,3.58261680273288,0,0,0,2.48550927042602,3.75241695969754,6.66229627405755,4.97163944728941,4.52557733019029,1.69693824176116,0.930135779001631,1.87791380979733,0.350296027101508,0.493679549740441,0.492502392237286,0.0810688095458557,0,0,0,1.89260953707715,3.08713837137853,0.991256348951394,0.528901133327089,1.91959425481711,3.48355007790658,1.41754207454303,0.605050573870028,1.77902435075896,0.760902504450237,0.474529061544512,0.329397909448022,0.754005626400808,0.795825888164603,0.38992817423824,0,0,0.199141273254367,5.50036912763937,2.97046132785295,4.50830942692322,4.2766778847516,3.68509725618489,2.38461787627083,1.7706230394792,0.590440591918409,1.8839847340965,3.57851775373222,0,0.83422552858047,0,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0.554259570499814,2.27389694124582,1.46668478797823,0.678980343100753,1.17345124144251,0.335012514883631,0.952174563544055,0.195133647857799,0.315270288212382,0.664394068946325,0.478364305972461,0.163863314715738,0.863424909329478,0,0,0,0,0,4.0137647496948,5.62616095642575,0,0,1.57754109708128,2.73307121007647,4.09304455692318,4.06246956519338,6.01556420022464,4.52922449262132,3.23848561339915,6.42962887404886,4.34816555741176,2.89189184779626,1.41940085208269,3.73937767701236,1.95464351224291,5.60898418106621,0,7.04063844849446,3.62788268357701,1.69744571780308,1.77181135728464,0.922305443831782,1.03371317267288,1.81766864738753,1.78248689192361,0,0,1.03135543248187,5.10659408630682,5.04171063287669,7.1147276080515,6.64444808597936,6.7389288784064,6.59964625127661,3.62007845324666,5.78483403317739,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0,0.291480836629851,4.82105785227325,1.19609616558497,3.09580301944834,2.03713980106683,0.753473828018764,0.956859594047176,0,0,0,0,0,3.16335993581135,2.64315307264903,1.51207477150522,1.25452977608681,2.40198820120795,0.404593039154462,0.909188012978695,0.785267825952089,0.518459893167171,0,0,3.13984746692355,3.47462829959905,4.083474955225,2.97067593998782,2.70329800785245,2.22978753426933,1.95306577265925,0.838874755405687,0,0,0,5.27085559754427,3.3894615864393,1.68897069871134,0.537080087002444,0.79472541912506,0.240390899039938,0.738447635872886,0.302899349844443,0.533447646584999,0.201652370273681,0.38983152295901,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0.335769232728157,0.386379188064381,0.187682475451182,0.36630324853453,0.857473516316263,0.501572104035363,0.564751842617067,0,0.572895513439397,0.343706364687375,0,1.5107877947794,0,0,0.453142408984205,1.03552062350364,1.45302286617847,1.59609949360412,2.21953687480374,1.21553358534147,0.838452650511929,1.83843508450014,0.888986911206461,0.618105171716683,0.320919209591815,1.26348605881899,1.01391719956096,0.943131706930381,0.842773567228942,1.28050304809739,1.43588672389033,0.952587382566147,0.811190281613988,1.35036454324594,0.412085900803307,1.17759136107518,2.40008476669791,1.24233064311536,0.953744759789284,0.726732083161643,1.03520318456864,0.846146078916765,0.914639864363863,1.57841826862706,1.08643291076689,0.561142271657738,0.830445126869219,1.37906275325789,0,0.619747364743864,0.771626443924566,3.49734809113124,0.935726433781634,0.859484216193193,0.57386499620653,0,0.231867835620421
|phase1_expression=1.28119077683835,0.697950815278722,0,0.90739263392049,0.500895729946347,0.671517087647559,0.700837921786577,0,1.40788722151667,1.17032263160997,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,1.02051948181284,0,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.646413698057667,0.760093677825496,0.756090389279792,1.77384408524244,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,17.2126095756569,24.41881751461,91.1697658348058,50.746203658388,8.53917171914711,18.6878333674463,0,0,0,0.257259436035947,0.85960031981627,0,3.84401275633236,4.23192783417626,3.80298842103708,4.06613438482959,0.889294796111139,0.449949858640699,1.97773272513395,0.7104801149461,45.5392167987975,107.196907184714,5.59923906465779,6.61529097825284,6.09942387919008,4.28476476605705,3.75476519617743,4.40966877173835,3.54628242767475,3.67687514644008,2.20231761998777,2.29837208553338,2.76491759861238,6.19865552331911,4.48289453651807,6.77187381723788,2.79182999001381,1.12552522006336,3.36156145108982,2.94628585473668,2.70506193518296,2.79599168737951,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.280888840263504,1.02258193546835,0.519572009205738,0.70667914902068,1.83096445709685,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0.258937883647172,1.48442139064825,1.38788261412909,1.82679286987285,2.07553947530453,1.20578112442098,1.52865319276416,0.376999773989026,3.21353458054686,0.144599356919912,0,0,0.220841518460394,0,0,2.63502717310392,3.77004072264219,0.510914110417183,0,0,0,1.79748767285787,1.83000241127451,1.63350657746724,1.21677024134594,0.767146371990992,2.0778804455956,4.2182728397617,2.54598409625791,0.373220911830279,0.505445516867349,0.420883711772948,5.72529949035896,7.35686734187113,8.28285797104606,8.43946979880004,9.72921937863988,13.3238269096244,15.3670828277955,5.95017752699736,1.5089759505299,2.26927296201383,2.28736461413134,0.876782929710299,2.22437799380478,1.74126083261083,0.411564272815887,3.58261680273288,0,0,0,2.48550927042602,3.75241695969754,6.66229627405755,4.97163944728941,4.52557733019029,1.69693824176116,0.930135779001631,1.87791380979733,0.350296027101508,0.493679549740441,0.492502392237286,0.0810688095458557,0,0,0,1.89260953707715,3.08713837137853,0.991256348951394,0.528901133327089,1.91959425481711,3.48355007790658,1.41754207454303,0.605050573870028,1.77902435075896,0.760902504450237,0.474529061544512,0.329397909448022,0.754005626400808,0.795825888164603,0.38992817423824,0,0,0.199141273254367,5.50036912763937,2.97046132785295,4.50830942692322,4.2766778847516,3.68509725618489,2.38461787627083,1.7706230394792,0.590440591918409,1.8839847340965,3.57851775373222,0,0.83422552858047,0,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0.554259570499814,2.27389694124582,1.46668478797823,0.678980343100753,1.17345124144251,0.335012514883631,0.952174563544055,0.195133647857799,0.315270288212382,0.664394068946325,0.478364305972461,0.163863314715738,0.863424909329478,0,0,0,0,0,4.0137647496948,5.62616095642575,0,0,1.57754109708128,2.73307121007647,4.09304455692318,4.06246956519338,6.01556420022464,4.52922449262132,3.23848561339915,6.42962887404886,4.34816555741176,2.89189184779626,1.41940085208269,3.73937767701236,1.95464351224291,5.60898418106621,0,7.04063844849446,3.62788268357701,1.69744571780308,1.77181135728464,0.922305443831782,1.03371317267288,1.81766864738753,1.78248689192361,0,0,1.03135543248187,5.10659408630682,5.04171063287669,7.1147276080515,6.64444808597936,6.7389288784064,6.59964625127661,3.62007845324666,5.78483403317739,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0,0.291480836629851,4.82105785227325,1.19609616558497,3.09580301944834,2.03713980106683,0.753473828018764,0.956859594047176,0,0,0,0,0,3.16335993581135,2.64315307264903,1.51207477150522,1.25452977608681,2.40198820120795,0.404593039154462,0.909188012978695,0.785267825952089,0.518459893167171,0,0,3.13984746692355,3.47462829959905,4.083474955225,2.97067593998782,2.70329800785245,2.22978753426933,1.95306577265925,0.838874755405687,0,0,0,5.27085559754427,3.3894615864393,1.68897069871134,0.537080087002444,0.79472541912506,0.240390899039938,0.738447635872886,0.302899349844443,0.533447646584999,0.201652370273681,0.38983152295901,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0.335769232728157,0.386379188064381,0.187682475451182,0.36630324853453,0.857473516316263,0.501572104035363,0.564751842617067,0,0.572895513439397,0.343706364687375,0,1.5107877947794,0,0,0.453142408984205,1.03552062350364,1.45302286617847,1.59609949360412,2.21953687480374,1.21553358534147,0.838452650511929,1.83843508450014,0.888986911206461,0.618105171716683,0.320919209591815,1.26348605881899,1.01391719956096,0.943131706930381,0.842773567228942,1.28050304809739,1.43588672389033,0.952587382566147,0.811190281613988,1.35036454324594,0.412085900803307,1.17759136107518,2.40008476669791,1.24233064311536,0.953744759789284,0.726732083161643,1.03520318456864,0.846146078916765,0.914639864363863,1.57841826862706,1.08643291076689,0.561142271657738,0.830445126869219,1.37906275325789,0,0.619747364743864,0.771626443924566,3.49734809113124,0.935726433781634,0.859484216193193,0.57386499620653,0,0.231867835620421
|short_description=p5@Ddr1
}}
}}

Latest revision as of 10:32, 26 September 2015

Short description:p5@Ddr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Ddr1_5end
Coexpression cluster:MCL_coexpression_mm9:205
Association with transcript: 0bp_to_ENSMUST00000117301, ENSMUST00000134995, uc008cim.1_5end
EntrezGene:Ddr1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Ddr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C224.42
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B891.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C350.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C845.54
Mouse Microglia, donor2.CNhs12634.11736-123E8107.20
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.60
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C65.73
eyeball, embryo E14.CNhs10521.399-16E27.36
eyeball, embryo E15.CNhs10593.426-16C98.28
eyeball, embryo E17.CNhs11023.1261-18D48.44
eyeball, neonate N00.CNhs11207.633-15C69.73
eyeball, neonate N01.CNhs11140.1532-43E713.32
eyeball, neonate N02.CNhs11205.1551-44G815.37
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I96.66
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I95.50
kidney, embryo E15.CNhs10997.434-16F82.97
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G72.38
kidney, neonate N10.CNhs11206.758-6D51.77
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.02
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H73.74
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G65.61
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F47.04
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E65.04
pituitary gland, embryo E13.CNhs11009.370-44C77.11
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B96.74
pituitary gland, embryo E16.CNhs11036.449-43F66.60
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G54.08
testis, embryo E17.CNhs11029.486-18I52.97
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B72.23
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I45.27
thymus, embryo E15.CNhs11005.430-45I23.39
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system7.84e-2673
ectoderm-derived structure6.38e-2595
ectoderm6.38e-2595
presumptive ectoderm6.38e-2595
nervous system2.13e-2475
neurectoderm3.96e-2164
neural plate3.96e-2164
presumptive neural plate3.96e-2164
structure with developmental contribution from neural crest6.55e-1892
ecto-epithelium4.77e-1773
regional part of nervous system2.53e-1554
neural tube5.19e-1552
neural rod5.19e-1552
future spinal cord5.19e-1552
neural keel5.19e-1552
pre-chordal neural plate7.13e-1449
brain8.95e-1347
future brain8.95e-1347
regional part of brain1.97e-1246
anterior neural tube2.54e-0940
regional part of forebrain3.69e-0939
forebrain3.69e-0939
future forebrain3.69e-0939
posterior neural tube3.63e-0712
chordal neural plate3.63e-0712
diencephalon3.93e-0710
future diencephalon3.93e-0710
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:35841519..35841577,-&oldid=4248733"