FFCP PHASE1:Mm9::chr18:60661347..60661399,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:60661347..60661399,-
|short_description=p4@2010002N04Rik
|description=CAGE_peak_4_at_2010002N04Rik_5end
|association_with_transcript=237bp_to_ENSMUST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=106878 | |EntrezGene=106878 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=384 | |||
|TSSclassifier=NA | |||
|UniProt=Q99PE5,Q3U1M0 | |UniProt=Q99PE5,Q3U1M0 | ||
|association_with_transcript=237bp_to_ENSMUST00000042710,NM_134133,uc008fag.1_5end | |||
|cluster_id=chr18:60661347..60661399,- | |||
|description=CAGE_peak_4_at_2010002N04Rik_5end | |||
|id=chr18:60661347..60661399,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.00e-10,19;CL:0000219,4.63e-10,54;CL:0000988,7.01e-10,32;CL:0002032,7.01e-10,32;CL:0000037,7.01e-10,32;CL:0000837,7.01e-10,32;CL:0002320,4.96e-09,46;CL:0000134,4.96e-09,46;CL:0000557,8.76e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,3.40e-08,6;DOID:0060100,4.80e-07,3;DOID:4045,4.80e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.96e-09,46;UBERON:0002371,3.47e-08,16 | |||
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| ||
|short_description=p4@2010002N04Rik | |||
}} | }} |
Latest revision as of 13:07, 1 October 2015
Short description: | p4@2010002N04Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_2010002N04Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:384 |
Association with transcript: | 237bp_to_ENSMUST00000042710, NM_134133, uc008fag.1_5end |
EntrezGene: | 2010002N04Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.00e-10 | 19 |
motile cell | 4.63e-10 | 54 |
hematopoietic cell | 7.01e-10 | 32 |
hematopoietic oligopotent progenitor cell | 7.01e-10 | 32 |
hematopoietic stem cell | 7.01e-10 | 32 |
hematopoietic multipotent progenitor cell | 7.01e-10 | 32 |
connective tissue cell | 4.96e-09 | 46 |
mesenchymal cell | 4.96e-09 | 46 |
granulocyte monocyte progenitor cell | 8.76e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.96e-09 | 46 |
bone marrow | 3.47e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 3.40e-08 | 6 |
musculoskeletal system cancer | 4.80e-07 | 3 |
muscle cancer | 4.80e-07 | 3 |