FFCP PHASE2:Hg19::chr17:48546324..48546335,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:1101 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1909 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1909 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 02:43, 16 September 2015
| Short description: | p2@CHAD |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_CHAD_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000508540_5end |
| EntrezGene: | CHAD |
| HGNC: | 1909 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@CHAD |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| B cell | 4.89e-59 | 14 |
| lymphocyte of B lineage | 1.19e-33 | 24 |
| pro-B cell | 1.19e-33 | 24 |
| CD1a-positive Langerhans cell | 9.98e-16 | 2 |
| immature CD1a-positive Langerhans cell | 9.98e-16 | 2 |
| lymphoid lineage restricted progenitor cell | 1.78e-14 | 52 |
| lymphocyte | 3.63e-14 | 53 |
| common lymphoid progenitor | 3.63e-14 | 53 |
| hematopoietic lineage restricted progenitor cell | 1.88e-07 | 120 |
| Langerhans cell | 8.58e-07 | 5 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| caudate-putamen | 5.80e-21 | 3 |
| dorsal striatum | 5.80e-21 | 3 |
| corpus striatum | 7.07e-16 | 4 |
| striatum | 7.07e-16 | 4 |
| ventral part of telencephalon | 7.07e-16 | 4 |
| future corpus striatum | 7.07e-16 | 4 |
| caudate nucleus | 1.19e-14 | 2 |
| future caudate nucleus | 1.19e-14 | 2 |
| basal ganglion | 2.41e-12 | 9 |
| nuclear complex of neuraxis | 2.41e-12 | 9 |
Showing 1 to 10 of 43 entries
