FFCP PHASE1:Mm9::chr19:36424066..36424074,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:36424066..36424074,+
|short_description=p@chr19:36424066..36424074,+
|description=CAGE_peak_at_chr19:36424066..36424074,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=374 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:36424066..36424074,+ | |||
|description=CAGE_peak_at_chr19:36424066..36424074,+ | |||
|id=chr19:36424066..36424074,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.76e-07!12;CL:0000791!2.80e-07!9;CL:0000789!2.80e-07!9;CL:0002420!2.80e-07!9;CL:0002419!2.80e-07!9;CL:0000790!2.80e-07!9;CL:0000084!8.14e-07!11;CL:0000827!8.14e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.50e-09,9;CL:0000789,7.50e-09,9;CL:0002420,7.50e-09,9;CL:0002419,7.50e-09,9;CL:0000790,7.50e-09,9;CL:0000838,3.32e-08,12;CL:0000624,5.10e-08,8;CL:0000084,1.31e-07,11;CL:0000827,1.31e-07,11;CL:0000542,3.22e-07,13;CL:0000051,3.22e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!8.99e-09!24;UBERON:0001557!8.99e-09!24;UBERON:0001042!8.99e-09!24;UBERON:0008814!8.99e-09!24;UBERON:0009145!8.99e-09!24;UBERON:0002370!3.08e-08!23;UBERON:0000974!3.08e-08!23;UBERON:0004807!3.08e-08!23;UBERON:0005058!3.08e-08!23;UBERON:0003351!3.08e-08!23;UBERON:0009113!3.08e-08!23;UBERON:0003295!3.08e-08!23;UBERON:0009722!3.08e-08!23;UBERON:0005562!3.08e-08!23;UBERON:0007690!3.08e-08!23;UBERON:0003929!3.20e-08!55;UBERON:0000490!4.71e-08!66;UBERON:0003408!6.36e-08!24;UBERON:0003081!6.60e-08!88;UBERON:0005057!1.48e-07!51;UBERON:0005911!1.48e-07!69;UBERON:0000072!8.82e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006562,2.10e-11,24;UBERON:0001557,2.10e-11,24;UBERON:0001042,2.10e-11,24;UBERON:0008814,2.10e-11,24;UBERON:0009145,2.10e-11,24;UBERON:0002370,1.03e-10,23;UBERON:0000974,1.03e-10,23;UBERON:0004807,1.03e-10,23;UBERON:0005058,1.03e-10,23;UBERON:0003351,1.03e-10,23;UBERON:0009113,1.03e-10,23;UBERON:0003295,1.03e-10,23;UBERON:0009722,1.03e-10,23;UBERON:0005562,1.03e-10,23;UBERON:0007690,1.03e-10,23;UBERON:0007811,5.79e-10,36;UBERON:0003408,6.47e-10,24;UBERON:0000072,3.67e-09,27;UBERON:0003081,3.92e-09,87;UBERON:0003929,3.18e-08,55;UBERON:0004177,3.88e-08,29;UBERON:0005057,3.88e-08,29;UBERON:0000490,5.33e-08,66;UBERON:0000077,7.95e-08,35;UBERON:0005911,1.15e-07,69;UBERON:0000065,1.83e-07,41;UBERON:0001004,4.65e-07,42;UBERON:0001048,9.07e-07,134 | |||
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| ||
|short_description=p@chr19:36424066..36424074,+ | |||
}} | }} |
Latest revision as of 23:41, 3 August 2015
Short description: | p@chr19:36424066..36424074, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:36424066..36424074, + |
Coexpression cluster: | MCL_coexpression_mm9:374 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.50e-09 | 9 |
alpha-beta T cell | 7.50e-09 | 9 |
immature T cell | 7.50e-09 | 9 |
mature T cell | 7.50e-09 | 9 |
immature alpha-beta T cell | 7.50e-09 | 9 |
lymphoid lineage restricted progenitor cell | 3.32e-08 | 12 |
CD4-positive, alpha-beta T cell | 5.10e-08 | 8 |
T cell | 1.31e-07 | 11 |
pro-T cell | 1.31e-07 | 11 |
lymphocyte | 3.22e-07 | 13 |
common lymphoid progenitor | 3.22e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
pharynx | 2.10e-11 | 24 |
upper respiratory tract | 2.10e-11 | 24 |
chordate pharynx | 2.10e-11 | 24 |
pharyngeal arch system | 2.10e-11 | 24 |
pharyngeal region of foregut | 2.10e-11 | 24 |
thymus | 1.03e-10 | 23 |
neck | 1.03e-10 | 23 |
respiratory system epithelium | 1.03e-10 | 23 |
hemolymphoid system gland | 1.03e-10 | 23 |
pharyngeal epithelium | 1.03e-10 | 23 |
thymic region | 1.03e-10 | 23 |
pharyngeal gland | 1.03e-10 | 23 |
entire pharyngeal arch endoderm | 1.03e-10 | 23 |
thymus primordium | 1.03e-10 | 23 |
early pharyngeal endoderm | 1.03e-10 | 23 |
craniocervical region | 5.79e-10 | 36 |
gland of gut | 6.47e-10 | 24 |
segment of respiratory tract | 3.67e-09 | 27 |
lateral plate mesoderm | 3.92e-09 | 87 |
gut epithelium | 3.18e-08 | 55 |
hemopoietic organ | 3.88e-08 | 29 |
immune organ | 3.88e-08 | 29 |
unilaminar epithelium | 5.33e-08 | 66 |
mixed endoderm/mesoderm-derived structure | 7.95e-08 | 35 |
endo-epithelium | 1.15e-07 | 69 |
respiratory tract | 1.83e-07 | 41 |
respiratory system | 4.65e-07 | 42 |
primordium | 9.07e-07 | 134 |