FFCP PHASE1:Mm9::chr1:135811595..135811619,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:135811595..135811619,-
|short_description=p@chr1:135811595..135811619,-
|description=CAGE_peak_at_chr1:135811595..135811619,-
|association_with_transcript=...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=148 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:135811595..135811619,- | |||
|description=CAGE_peak_at_chr1:135811595..135811619,- | |||
|id=chr1:135811595..135811619,- | |||
|ontology_enrichment_celltype=CL:0002453!6.86e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.91e-15,8;CL:0000222,1.88e-13,7;CL:0000128,7.25e-12,6;CL:0000126,7.25e-12,6;CL:0000127,7.25e-12,6;CL:0000680,8.23e-12,6;CL:0000187,8.23e-12,6;CL:0000056,8.23e-12,6;CL:0000333,9.21e-12,10;CL:0000095,9.21e-12,10;CL:0000243,9.21e-12,10;CL:0000123,9.21e-12,10;CL:0000125,9.21e-12,10;CL:0000030,9.21e-12,10;CL:0000339,9.21e-12,10;CL:0000355,1.49e-07,9;CL:0002321,6.97e-07,70;CL:0000192,7.68e-07,3;CL:0000359,7.68e-07,3;CL:0002539,7.68e-07,3;CL:0000514,7.68e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.43e-10,5;UBERON:0007500,4.43e-10,5;UBERON:0001981,4.43e-10,5;UBERON:0002049,4.43e-10,5;UBERON:0007798,4.43e-10,5;UBERON:0004537,4.43e-10,5;UBERON:0006965,4.43e-10,5;UBERON:0000947,1.92e-08,4;UBERON:0001637,1.92e-08,4;UBERON:0004573,1.92e-08,4;UBERON:0003509,1.92e-08,4;UBERON:0004571,1.92e-08,4;UBERON:0010191,1.92e-08,4;UBERON:0004572,1.92e-08,4;UBERON:0001134,1.49e-07,9;UBERON:0002036,1.49e-07,9;UBERON:0002385,1.49e-07,9;UBERON:0000486,1.49e-07,9;UBERON:0007503,1.49e-07,9;UBERON:0001015,1.49e-07,9;UBERON:0002329,1.49e-07,9;UBERON:0003082,1.49e-07,9;UBERON:0003059,1.49e-07,9;UBERON:0007282,1.49e-07,9;UBERON:0004290,1.49e-07,9;UBERON:0009618,1.49e-07,9;UBERON:0001135,7.68e-07,3;UBERON:0004237,7.68e-07,3;UBERON:0004695,7.68e-07,3;UBERON:0002111,7.68e-07,3;UBERON:0004178,7.68e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.577703239502549,1.16364251750945,0.408338712524738,0,0,0,0,0,0,10.4494358919729,9.63080846585388,4.9557623083654,3.9119567217402,5.88667922227206,27.02140047634,53.4682222454279,2.93971485413261,2.87505128729943,0,0,0,2.82985379639542,10.601737277734,4.12537673821954,0,0,0,0.677689064138264,0,1.3498495759221,1.97773272513395,0,2.39680088414724,10.7581125490035,0,0,0,0,0.441737081903227,0,0,0,1.10115880999389,0.510749352340751,0.307213066512487,0.131886287730194,0.182975287204819,0,0.837548997004143,1.12552522006336,0.763991238884051,0,0.142371680799103,0,0,0,4.05810284182349,5.16254326188832,0,0,0.649776417447669,0,0.421333260395256,11.930122580464,6.49465011507172,4.59341446863442,0.14084341977668,16.6824420638613,0,14.2213340630666,0,0,0,0.68510327831436,0,0.742210695324124,0,0,0.461230994512117,0,0.23517741427141,0.753999547978053,0.741584903203122,3.32578520915797,0,1.29413479957927,1.10420759230197,0.484875253135222,0,0.292780797011547,0.209446706813455,0.510914110417183,0,0,0,0,0.457500602818626,0,0.173824320192276,0.255715457330331,0.41557608911912,0.162241263067758,0.203678727700633,0.995255764880744,0.252722758433675,0.420883711772948,0,0,0,0,0,0.12811372028485,0.281105173679186,0.517406741478031,0,0,0.351902248327898,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0,0,0.930135779001631,0,0.233530684734339,0,0.32833492815819,0.324275238183423,0.730999937126662,1.97595103761946,0.671032093801859,0.630869845692382,0.102904612379284,0,1.05780226665418,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,1.03327103585722,0.156998727841375,0.246794327843601,0.592905254174298,0,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.486405680325106,0.274561413188081,11.5014565221884,0,0.624075346229121,0.505157755894224,0.717589654087649,2.41221760681684,3.32555742299888,0,0.325929952884052,0.339490171550376,0.704070744865506,0.502518772325447,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,0.956728611944923,3.27726629431476,2.76295970985433,2.74833211304872,0,0,1.96705709207614,0.551873492609465,0.481651769963376,0.35163505977661,0,0.504941854408746,0.315508219416257,0.780877488593277,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,1.16902343164525,0.395287777946524,0.321321316421807,0.283880170416537,0.534196811001766,0.488660878060728,1.15479086080775,1.32745138339963,0,0,0,0.590603785761546,0,0,0,0.356497378384721,0.948110273807448,0,1.03135543248187,1.70219802876894,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0.469343416127421,0,0.661585194164886,0.98931751764888,0.161464426695906,0.241251699712623,0.596861720015682,0.164140899745061,0,0.18542530201051,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.269728692769641,0.330613822901344,0.785267825952089,0.518459893167171,0.621339313086926,0,0,0,0,0,0,0,0.5208175393758,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.292373642219257,0,0,1.36038230169127,0,0,0,2.12508553435409,1.12609485270709,0,0.643105137237198,1.00314420807073,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0.906284817968409,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.824140228955577,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.280924522409647,0.384150914429216,0.229741875822453,0.476293691283074,0.695305955669133,0.578727661391115,0,0.294397840268795,1.02860775715625,0.532427418478012,0,0.290692833264657,0.470546902076653,0.338458431566706,0.182927972872773,0,1.08643291076689,0.561142271657738,0,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,0.57386499620653,1.32354851471709,0.695603506861264 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.577703239502549,1.16364251750945,0.408338712524738,0,0,0,0,0,0,10.4494358919729,9.63080846585388,4.9557623083654,3.9119567217402,5.88667922227206,27.02140047634,53.4682222454279,2.93971485413261,2.87505128729943,0,0,0,2.82985379639542,10.601737277734,4.12537673821954,0,0,0,0.677689064138264,0,1.3498495759221,1.97773272513395,0,2.39680088414724,10.7581125490035,0,0,0,0,0.441737081903227,0,0,0,1.10115880999389,0.510749352340751,0.307213066512487,0.131886287730194,0.182975287204819,0,0.837548997004143,1.12552522006336,0.763991238884051,0,0.142371680799103,0,0,0,4.05810284182349,5.16254326188832,0,0,0.649776417447669,0,0.421333260395256,11.930122580464,6.49465011507172,4.59341446863442,0.14084341977668,16.6824420638613,0,14.2213340630666,0,0,0,0.68510327831436,0,0.742210695324124,0,0,0.461230994512117,0,0.23517741427141,0.753999547978053,0.741584903203122,3.32578520915797,0,1.29413479957927,1.10420759230197,0.484875253135222,0,0.292780797011547,0.209446706813455,0.510914110417183,0,0,0,0,0.457500602818626,0,0.173824320192276,0.255715457330331,0.41557608911912,0.162241263067758,0.203678727700633,0.995255764880744,0.252722758433675,0.420883711772948,0,0,0,0,0,0.12811372028485,0.281105173679186,0.517406741478031,0,0,0.351902248327898,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0,0,0.930135779001631,0,0.233530684734339,0,0.32833492815819,0.324275238183423,0.730999937126662,1.97595103761946,0.671032093801859,0.630869845692382,0.102904612379284,0,1.05780226665418,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,1.03327103585722,0.156998727841375,0.246794327843601,0.592905254174298,0,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.486405680325106,0.274561413188081,11.5014565221884,0,0.624075346229121,0.505157755894224,0.717589654087649,2.41221760681684,3.32555742299888,0,0.325929952884052,0.339490171550376,0.704070744865506,0.502518772325447,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,0.956728611944923,3.27726629431476,2.76295970985433,2.74833211304872,0,0,1.96705709207614,0.551873492609465,0.481651769963376,0.35163505977661,0,0.504941854408746,0.315508219416257,0.780877488593277,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,1.16902343164525,0.395287777946524,0.321321316421807,0.283880170416537,0.534196811001766,0.488660878060728,1.15479086080775,1.32745138339963,0,0,0,0.590603785761546,0,0,0,0.356497378384721,0.948110273807448,0,1.03135543248187,1.70219802876894,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0.469343416127421,0,0.661585194164886,0.98931751764888,0.161464426695906,0.241251699712623,0.596861720015682,0.164140899745061,0,0.18542530201051,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.269728692769641,0.330613822901344,0.785267825952089,0.518459893167171,0.621339313086926,0,0,0,0,0,0,0,0.5208175393758,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.292373642219257,0,0,1.36038230169127,0,0,0,2.12508553435409,1.12609485270709,0,0.643105137237198,1.00314420807073,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0.906284817968409,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.824140228955577,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.280924522409647,0.384150914429216,0.229741875822453,0.476293691283074,0.695305955669133,0.578727661391115,0,0.294397840268795,1.02860775715625,0.532427418478012,0,0.290692833264657,0.470546902076653,0.338458431566706,0.182927972872773,0,1.08643291076689,0.561142271657738,0,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,0.57386499620653,1.32354851471709,0.695603506861264 | ||
|short_description=p@chr1:135811595..135811619,- | |||
}} | }} |
Latest revision as of 19:48, 4 August 2015
Short description: | p@chr1:135811595..135811619, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135811595..135811619, - |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.91e-15 | 8 |
mesodermal cell | 1.88e-13 | 7 |
oligodendrocyte | 7.25e-12 | 6 |
macroglial cell | 7.25e-12 | 6 |
astrocyte | 7.25e-12 | 6 |
muscle precursor cell | 8.23e-12 | 6 |
muscle cell | 8.23e-12 | 6 |
myoblast | 8.23e-12 | 6 |
migratory neural crest cell | 9.21e-12 | 10 |
neuron associated cell | 9.21e-12 | 10 |
glial cell (sensu Vertebrata) | 9.21e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 9.21e-12 | 10 |
glial cell | 9.21e-12 | 10 |
glioblast | 9.21e-12 | 10 |
glioblast (sensu Vertebrata) | 9.21e-12 | 10 |
multi-potent skeletal muscle stem cell | 1.49e-07 | 9 |
embryonic cell | 6.97e-07 | 70 |
smooth muscle cell | 7.68e-07 | 3 |
vascular associated smooth muscle cell | 7.68e-07 | 3 |
aortic smooth muscle cell | 7.68e-07 | 3 |
smooth muscle myoblast | 7.68e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vessel | 4.43e-10 | 5 |
epithelial tube open at both ends | 4.43e-10 | 5 |
blood vessel | 4.43e-10 | 5 |
vasculature | 4.43e-10 | 5 |
vascular system | 4.43e-10 | 5 |
blood vasculature | 4.43e-10 | 5 |
vascular cord | 4.43e-10 | 5 |
aorta | 1.92e-08 | 4 |
artery | 1.92e-08 | 4 |
systemic artery | 1.92e-08 | 4 |
arterial blood vessel | 1.92e-08 | 4 |
systemic arterial system | 1.92e-08 | 4 |
aortic system | 1.92e-08 | 4 |
arterial system | 1.92e-08 | 4 |
skeletal muscle tissue | 1.49e-07 | 9 |
striated muscle tissue | 1.49e-07 | 9 |
muscle tissue | 1.49e-07 | 9 |
multilaminar epithelium | 1.49e-07 | 9 |
epithelial vesicle | 1.49e-07 | 9 |
musculature | 1.49e-07 | 9 |
somite | 1.49e-07 | 9 |
myotome | 1.49e-07 | 9 |
presomitic mesoderm | 1.49e-07 | 9 |
presumptive segmental plate | 1.49e-07 | 9 |
dermomyotome | 1.49e-07 | 9 |
trunk paraxial mesoderm | 1.49e-07 | 9 |
smooth muscle tissue | 7.68e-07 | 3 |
blood vessel smooth muscle | 7.68e-07 | 3 |
arterial system smooth muscle | 7.68e-07 | 3 |
artery smooth muscle tissue | 7.68e-07 | 3 |
aorta smooth muscle tissue | 7.68e-07 | 3 |