FFCP PHASE1:Hg19::chr1:72748128..72748139,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=257194 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=17302 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B4DI94 | ||
|association_with_transcript=35bp_to_AK295481_5end | |association_with_transcript=35bp_to_AK295481_5end | ||
|cluster_id=chr1:72748128..72748139,- | |cluster_id=chr1:72748128..72748139,- | ||
Latest revision as of 04:38, 19 September 2015
| Short description: | p6@NEGR1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_NEGR1_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 35bp_to_AK295481_5end |
| EntrezGene: | NEGR1 |
| HGNC: | 17302 |
| UniProt: | B4DI94 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p6@NEGR1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neocortex | 5.12e-71 | 20 |
| regional part of cerebral cortex | 1.80e-64 | 22 |
| cerebral cortex | 1.54e-56 | 25 |
| pallium | 1.54e-56 | 25 |
| cerebral hemisphere | 2.71e-54 | 32 |
| telencephalon | 6.43e-51 | 34 |
| regional part of telencephalon | 8.98e-49 | 32 |
| brain grey matter | 9.99e-46 | 34 |
| gray matter | 9.99e-46 | 34 |
| regional part of forebrain | 1.24e-41 | 41 |
Showing 1 to 10 of 43 entries
