FFCP PHASE1:Hg19::chr21:42540108..42540124,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=25825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=934 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 12:21, 18 September 2015
| Short description: | p3@BACE2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_BACE2_5end |
| Coexpression cluster: | C4078_Mast_Endothelial_Lymphatic_Melanocyte_melanoma_Hep2_Hepatic |
| Association with transcript: | 53bp_to_ENST00000544566_5end |
| EntrezGene: | BACE2 |
| HGNC: | 934 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@BACE2 |
|---|
0
25
50
75
100
125
150
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 2.40e-18 | 253 |
| endothelial cell of vascular tree | 7.82e-16 | 24 |
| endothelial cell | 1.21e-14 | 36 |
| mesodermal cell | 2.67e-14 | 121 |
| lining cell | 9.82e-14 | 58 |
| barrier cell | 9.82e-14 | 58 |
| meso-epithelial cell | 2.72e-13 | 45 |
| embryonic cell | 6.00e-13 | 250 |
| blood vessel endothelial cell | 1.98e-11 | 18 |
| embryonic blood vessel endothelial progenitor cell | 1.98e-11 | 18 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| vessel | 1.09e-18 | 68 |
| vasculature | 3.28e-17 | 78 |
| vascular system | 3.28e-17 | 78 |
| epithelial tube open at both ends | 5.79e-17 | 59 |
| blood vessel | 5.79e-17 | 59 |
| blood vasculature | 5.79e-17 | 59 |
| vascular cord | 5.79e-17 | 59 |
| splanchnic layer of lateral plate mesoderm | 8.03e-15 | 83 |
| epithelial tube | 9.62e-15 | 117 |
| cardiovascular system | 1.48e-11 | 109 |
Showing 1 to 10 of 29 entries
