FFCP PHASE2:Hg19::chr22:50689640..50689700,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:83933 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:18128 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=83933 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=18128 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q08AP5,C9J8B8 | ||
|association_with_transcript=0bp_to_ENST00000415993,ENST00000448072,ENST00000483222,ENST00000489424,uc003bke.2,uc003bkf.2_5end | |association_with_transcript=0bp_to_ENST00000415993,ENST00000448072,ENST00000483222,ENST00000489424,uc003bke.2,uc003bkf.2_5end | ||
|cluster_id=chr22:50689640..50689700,- | |cluster_id=chr22:50689640..50689700,- | ||
Latest revision as of 19:38, 15 September 2015
| Short description: | p1@HDAC10 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_HDAC10_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000415993, ENST00000448072, ENST00000483222, ENST00000489424, uc003bke.2, uc003bkf.2_5end |
| EntrezGene: | HDAC10 |
| HGNC: | 18128 |
| UniProt: | Q08AP5C9J8B8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@HDAC10 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic cell | 2.95e-44 | 177 |
| hematopoietic stem cell | 7.52e-44 | 168 |
| hematopoietic oligopotent progenitor cell | 4.17e-40 | 161 |
| hematopoietic multipotent progenitor cell | 4.17e-40 | 161 |
| leukocyte | 6.31e-39 | 136 |
| nongranular leukocyte | 2.25e-33 | 115 |
| hematopoietic lineage restricted progenitor cell | 1.72e-30 | 120 |
| myeloid cell | 2.16e-25 | 108 |
| common myeloid progenitor | 2.16e-25 | 108 |
| myeloid leukocyte | 9.38e-22 | 72 |
Showing 1 to 10 of 37 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 3.15e-26 | 98 |
| blood island | 3.15e-26 | 98 |
| hemolymphoid system | 8.54e-26 | 108 |
| immune system | 2.58e-20 | 93 |
| bone marrow | 4.53e-19 | 76 |
| connective tissue | 3.70e-18 | 371 |
| bone element | 2.88e-15 | 82 |
| skeletal element | 5.90e-14 | 90 |
| skeletal system | 9.78e-12 | 100 |
| lateral plate mesoderm | 5.95e-11 | 203 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| leukemia | 7.13e-08 | 39 |
| hematologic cancer | 2.63e-07 | 51 |
| immune system cancer | 2.63e-07 | 51 |
Showing 1 to 3 of 3 entries
