FFCP PHASE1:Hg19::chr2:229046484..229046499,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=80309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=30619 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q2M3C7 | ||
|association_with_transcript=-123bp_to_ENST00000392056,NM_001142644,NM_030623,uc002vpp.2,uc002vpq.2,uc010zlx.1_5end | |association_with_transcript=-123bp_to_ENST00000392056,NM_001142644,NM_030623,uc002vpp.2,uc002vpq.2,uc010zlx.1_5end | ||
|cluster_id=chr2:229046484..229046499,- | |cluster_id=chr2:229046484..229046499,- | ||
Latest revision as of 04:41, 25 September 2015
| Short description: | p5@SPHKAP |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_SPHKAP_5end |
| Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
| Association with transcript: | -123bp_to_ENST00000392056, NM_001142644, NM_030623, uc002vpp.2, uc002vpq.2, uc010zlx.1_5end |
| EntrezGene: | SPHKAP |
| HGNC: | 30619 |
| UniProt: | Q2M3C7 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p5@SPHKAP |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 5.24e-21 | 53 |
| regional part of brain | 5.24e-21 | 53 |
| neural tube | 8.46e-20 | 56 |
| neural rod | 8.46e-20 | 56 |
| future spinal cord | 8.46e-20 | 56 |
| neural keel | 8.46e-20 | 56 |
| segmental subdivision of hindbrain | 2.72e-18 | 12 |
| hindbrain | 2.72e-18 | 12 |
| presumptive hindbrain | 2.72e-18 | 12 |
| amygdala | 4.11e-18 | 2 |
Showing 1 to 10 of 57 entries
