FFCP PHASE1:Mm9::chr2:165213745..165213815,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:165213745..165213815,-
|short_description=p1@Zfp334
|description=CAGE_peak_1_at_Zfp334_5end
|association_with_transcript=0bp_to_ENSMUST00000103084,NM_17841...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=228876 | |EntrezGene=228876 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=321 | |||
|TSSclassifier=NA | |||
|UniProt=A2A4U6 | |UniProt=A2A4U6 | ||
|association_with_transcript=0bp_to_ENSMUST00000103084,NM_178411,uc008nxq.1_5end | |||
|cluster_id=chr2:165213745..165213815,- | |||
|description=CAGE_peak_1_at_Zfp334_5end | |||
|id=chr2:165213745..165213815,- | |||
|ontology_enrichment_celltype=CL:0000540!2.13e-14!33;CL:0000047!2.13e-14!33;CL:0000031!2.13e-14!33;CL:0000404!2.13e-14!33;CL:0000393!1.01e-13!39;CL:0000211!1.01e-13!39;CL:0000117!2.72e-11!23;CL:0000337!2.72e-11!23;CL:0002319!6.42e-11!43;CL:0000221!8.27e-11!44;CL:0000133!8.27e-11!44;CL:0000055!2.07e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.83e-14,33;CL:0000047,1.83e-14,33;CL:0000031,1.83e-14,33;CL:0000404,1.83e-14,33;CL:0000393,8.72e-14,39;CL:0000211,8.72e-14,39;CL:0000117,2.42e-11,23;CL:0000337,2.42e-11,23;CL:0002319,5.75e-11,43;CL:0000221,7.41e-11,44;CL:0000133,7.41e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.07e-21!73;UBERON:0005743!1.07e-21!73;UBERON:0000073!1.78e-21!75;UBERON:0001016!1.78e-21!75;UBERON:0004121!3.59e-20!102;UBERON:0000924!3.59e-20!102;UBERON:0006601!3.59e-20!102;UBERON:0002346!5.96e-20!71;UBERON:0003075!5.96e-20!71;UBERON:0007284!5.96e-20!71;UBERON:0000033!8.28e-18!63;UBERON:0003056!5.77e-17!49;UBERON:0001049!4.04e-16!52;UBERON:0005068!4.04e-16!52;UBERON:0006241!4.04e-16!52;UBERON:0007135!4.04e-16!52;UBERON:0000955!4.17e-16!50;UBERON:0006238!4.17e-16!50;UBERON:0002616!1.46e-15!49;UBERON:0003080!6.18e-14!40;UBERON:0002780!1.74e-13!39;UBERON:0001890!1.74e-13!39;UBERON:0006240!1.74e-13!39;UBERON:0000468!2.52e-11!333;UBERON:0000025!4.15e-11!114;UBERON:0002020!1.26e-10!34;UBERON:0000922!3.10e-10!328;UBERON:0004111!1.56e-09!122;UBERON:0002791!2.09e-09!29;UBERON:0003528!2.09e-09!29;UBERON:0001893!2.09e-09!29;UBERON:0000153!5.02e-09!94;UBERON:0007811!1.96e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.44e-22,73;UBERON:0001016,1.41e-21,75;UBERON:0002346,1.55e-20,64;UBERON:0003075,1.55e-20,64;UBERON:0007284,1.55e-20,64;UBERON:0004121,4.33e-20,95;UBERON:0000924,4.33e-20,95;UBERON:0006601,4.33e-20,95;UBERON:0010314,1.34e-17,92;UBERON:0010371,4.23e-17,73;UBERON:0003056,4.81e-17,49;UBERON:0000073,5.20e-17,54;UBERON:0001049,3.40e-16,52;UBERON:0005068,3.40e-16,52;UBERON:0006241,3.40e-16,52;UBERON:0007135,3.40e-16,52;UBERON:0000955,3.69e-15,47;UBERON:0006238,3.69e-15,47;UBERON:0002616,1.28e-14,46;UBERON:0003080,5.34e-14,40;UBERON:0002780,1.51e-13,39;UBERON:0001890,1.51e-13,39;UBERON:0006240,1.51e-13,39;UBERON:0000025,4.45e-11,114;UBERON:0002020,1.13e-10,34;UBERON:0000922,2.97e-10,320;UBERON:0003528,1.90e-09,29;UBERON:0002791,1.90e-09,29;UBERON:0001893,1.90e-09,29;UBERON:0004111,1.99e-09,122 | |||
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| ||
|short_description=p1@Zfp334 | |||
}} | }} |
Latest revision as of 04:08, 26 September 2015
Short description: | p1@Zfp334 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp334_5end |
Coexpression cluster: | MCL_coexpression_mm9:321 |
Association with transcript: | 0bp_to_ENSMUST00000103084, NM_178411, uc008nxq.1_5end |
EntrezGene: | Zfp334 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.83e-14 | 33 |
neuronal stem cell | 1.83e-14 | 33 |
neuroblast | 1.83e-14 | 33 |
electrically signaling cell | 1.83e-14 | 33 |
electrically responsive cell | 8.72e-14 | 39 |
electrically active cell | 8.72e-14 | 39 |
CNS neuron (sensu Vertebrata) | 2.42e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.42e-11 | 23 |
neural cell | 5.75e-11 | 43 |
ectodermal cell | 7.41e-11 | 44 |
neurectodermal cell | 7.41e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.44e-22 | 73 |
nervous system | 1.41e-21 | 75 |
neurectoderm | 1.55e-20 | 64 |
neural plate | 1.55e-20 | 64 |
presumptive neural plate | 1.55e-20 | 64 |
ectoderm-derived structure | 4.33e-20 | 95 |
ectoderm | 4.33e-20 | 95 |
presumptive ectoderm | 4.33e-20 | 95 |
structure with developmental contribution from neural crest | 1.34e-17 | 92 |
ecto-epithelium | 4.23e-17 | 73 |
pre-chordal neural plate | 4.81e-17 | 49 |
regional part of nervous system | 5.20e-17 | 54 |
neural tube | 3.40e-16 | 52 |
neural rod | 3.40e-16 | 52 |
future spinal cord | 3.40e-16 | 52 |
neural keel | 3.40e-16 | 52 |
brain | 3.69e-15 | 47 |
future brain | 3.69e-15 | 47 |
regional part of brain | 1.28e-14 | 46 |
anterior neural tube | 5.34e-14 | 40 |
regional part of forebrain | 1.51e-13 | 39 |
forebrain | 1.51e-13 | 39 |
future forebrain | 1.51e-13 | 39 |
tube | 4.45e-11 | 114 |
gray matter | 1.13e-10 | 34 |
embryo | 2.97e-10 | 320 |
brain grey matter | 1.90e-09 | 29 |
regional part of telencephalon | 1.90e-09 | 29 |
telencephalon | 1.90e-09 | 29 |
anatomical conduit | 1.99e-09 | 122 |