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FFCP PHASE1:Mm9::chr2:28368625..28368646,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:28368625..28368646,+
|DHSsupport=NA
|short_description=p3@Ralgds
|DPIdataset=NA
|description=CAGE_peak_3_at_Ralgds_5end
|association_with_transcript=0bp_to_ENSMUST00000135803_5end
|EntrezGene=19730
|EntrezGene=19730
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=B0R018
|UniProt=B0R018
|association_with_transcript=0bp_to_ENSMUST00000135803_5end
|cluster_id=chr2:28368625..28368646,+
|description=CAGE_peak_3_at_Ralgds_5end
|id=chr2:28368625..28368646,+
|ontology_enrichment_celltype=CL:0000221!5.02e-14!44;CL:0000133!5.02e-14!44;CL:0000540!6.46e-14!33;CL:0000047!6.46e-14!33;CL:0000031!6.46e-14!33;CL:0000404!6.46e-14!33;CL:0002319!9.66e-14!43;CL:0000055!1.19e-11!50;CL:0000393!2.17e-11!39;CL:0000211!2.17e-11!39;CL:0000117!4.71e-11!23;CL:0000337!4.71e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000540,7.81e-18,33;CL:0000047,7.81e-18,33;CL:0000031,7.81e-18,33;CL:0000404,7.81e-18,33;CL:0000221,1.47e-17,44;CL:0000133,1.47e-17,44;CL:0002319,3.45e-17,43;CL:0000117,1.92e-14,23;CL:0000337,1.92e-14,23;CL:0000393,4.33e-13,39;CL:0000211,4.33e-13,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.37e-19!75;UBERON:0001016!1.37e-19!75;UBERON:0004121!1.52e-19!102;UBERON:0000924!1.52e-19!102;UBERON:0006601!1.52e-19!102;UBERON:0001017!2.55e-19!73;UBERON:0005743!2.55e-19!73;UBERON:0002346!8.50e-17!71;UBERON:0003075!8.50e-17!71;UBERON:0007284!8.50e-17!71;UBERON:0001049!2.38e-14!52;UBERON:0005068!2.38e-14!52;UBERON:0006241!2.38e-14!52;UBERON:0007135!2.38e-14!52;UBERON:0000033!1.04e-13!63;UBERON:0003056!2.58e-13!49;UBERON:0002020!4.95e-12!34;UBERON:0003080!1.85e-11!40;UBERON:0000955!2.65e-11!50;UBERON:0006238!2.65e-11!50;UBERON:0002780!5.48e-11!39;UBERON:0001890!5.48e-11!39;UBERON:0006240!5.48e-11!39;UBERON:0002616!9.09e-11!49;UBERON:0002791!4.43e-09!29;UBERON:0003528!4.43e-09!29;UBERON:0001893!4.43e-09!29
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.66e-23,73;UBERON:0001016,2.09e-23,75;UBERON:0004121,1.70e-21,95;UBERON:0000924,1.70e-21,95;UBERON:0006601,1.70e-21,95;UBERON:0002346,1.27e-19,64;UBERON:0003075,1.27e-19,64;UBERON:0007284,1.27e-19,64;UBERON:0010371,1.36e-17,73;UBERON:0001049,1.78e-16,52;UBERON:0005068,1.78e-16,52;UBERON:0006241,1.78e-16,52;UBERON:0007135,1.78e-16,52;UBERON:0000073,5.56e-16,54;UBERON:0003056,2.53e-14,49;UBERON:0002020,1.07e-13,34;UBERON:0000955,2.50e-13,47;UBERON:0006238,2.50e-13,47;UBERON:0002616,1.22e-12,46;UBERON:0003080,1.57e-12,40;UBERON:0010314,4.02e-12,92;UBERON:0002780,6.05e-12,39;UBERON:0001890,6.05e-12,39;UBERON:0006240,6.05e-12,39;UBERON:0003528,5.33e-10,29;UBERON:0002791,5.33e-10,29;UBERON:0001893,5.33e-10,29
|phase1_expression=2.7225304007815,0,0,0,0,0.33575854382378,0.467225281191051,0.129123323441576,0.281577444303333,0.468129052643987,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.595303031057488,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.485510353031154,0.377690453926732,0.709638518536602,0.917733760808408,1.56478268869608,1.52617609466313,1.75748946187577,0.58328969722285,1.25987779462826,0,0,0,0,0,0.573066879877513,0.515672092277442,10.9250888864183,16.398720357433,8.87363964908651,1.35537812827653,1.77858959222228,0.449949858640699,0,0.7104801149461,1.49800055259202,1.15265491596466,3.83651565541367,4.86021377994086,2.52389953621658,7.14127461009509,6.62605622854841,4.04219637409348,2.97120960156533,6.43453150627015,0,1.27687338085188,1.22885226604995,9.36392642884376,9.60620257825301,11.4600941522487,1.67509799400829,1.12552522006336,1.5279824777681,3.83017161115768,3.98640706237488,4.10078780815661,0.681535739998656,1.96486056277642,0.289864488701678,0.860423876981386,0,0,0,0,0.702222100658759,0.170430322578058,0.259786004602869,0,1.69012103732017,0,0,0,0,0,0.505524445014783,0.22836775943812,0.517875767294343,0.29688427812965,1.56136794089522,1.82679286987285,0.230615497256059,0.753613202763113,1.17588707135705,0.628332956648377,0.247194967734374,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,0,0.41889341362691,0,0.718890747035522,0.599902730993408,0.381210681219194,2.54644086988199,1.37250180845588,7.03664371832041,0.869121600961382,1.53429274398198,1.45451631191692,2.10913641988085,2.34230536855727,0.746441823660558,0,0.420883711772948,1.95180664444056,0.689706313300419,3.78130472591233,2.10986744970001,3.40182495756639,2.8185018462667,3.74806898238915,0.258703370739016,1.07783996466421,1.89106080167819,2.46331573829528,1.31517439456545,1.94633074457919,1.0447564995665,1.85203922767149,1.79130840136644,0,0.772043721344145,0.284163499395593,0.621377317606506,0.469052119962192,0.36012412292203,0.473489471170421,1.37734962223183,0.925602677324269,0.232533944750408,1.07309360559848,0.934122738937356,0.329119699826961,0.656669856316381,0.810688095458557,0.292399974850665,0.219550115291051,0.402619256281115,0.630869845692382,7.51203670368776,0,0,0.639864751605702,1.16118335930219,1.28867461322093,1.00841762311671,0.22237804384487,0.190225626112559,0,0.658795818896044,0.502670417600539,0.795825888164603,0.779856348476481,0,0.216138049874694,0,1.13800740571849,1.14248512609729,0,0.407302655690628,0.581857461502877,1.68325967736765,0.632365371242573,0,0,0.246794327843601,0,0,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.37898282354097,0.814824882210129,0.848725428875941,1.17345124144251,1.00503754465089,0.952174563544055,0.780534591431195,0.788175720530955,0.664394068946325,1.2756381492599,1.47476983244164,0.518054945597687,0.578596234326046,0,0.54390568381871,0,0.275936746304732,1.28440471990234,2.22702204525186,0,0.252470927204373,1.26203287766503,2.34263246577983,1.72338718186239,0.477937595905104,2.67358408898873,3.67999490025482,2.42886421004937,1.75353514746787,1.58115111178609,3.85585579706168,0.99358059645788,2.13678724400706,2.44330439030364,0.989820737835213,0,0.971122544619926,0.302323556964751,0.565815239267694,0.885905678642318,1.53717573971964,1.55056975900933,0.727067458955011,0.356497378384721,0,0,0,0.340439605753788,2.16073312837572,2.19909762430683,1.50035924522115,0.709360934569094,2.31879462882692,1.81003922662333,1.522324745573,0.469343416127421,0.847328283455281,0,0.49465875882444,1.61464426695906,0.482503399425247,0.596861720015682,0.656563598980245,0.874442509889552,1.29797711407357,0.170870880797853,1.23832120777933,1.29636169158798,0,0.136694227721025,0.228778173206523,0.339956859987711,0.559805809294632,0.829199842826543,0,2.37251995185852,0.813277868507395,0.86404272657441,0.209088296014469,0.655087691238533,0.674321731924103,0.743881101528023,0.26175594198403,0.259229946583586,0.621339313086926,2.81846469342095,1.79419855252775,0.330916980914195,1.36115831840833,2.71235629303235,0.506868376472335,1.40828686374905,1.95306577265925,1.36317147753424,0.966336483304024,1.15212002503146,0,1.41907650703115,0.102710957164827,0.25984164595559,0.358053391334963,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.192423683280659,0,0.680191150845634,0,0.179427713218951,0,0.386379188064381,0.187682475451182,1.09890974560359,0.643105137237198,0.501572104035363,1.12950368523413,3.22227665555024,1.71868654031819,2.749650917499,0.685082519770642,0,2.02506750069542,2.2516060161211,2.26571204492102,1.03552062350364,0.93408612825759,5.58634822761443,3.58540572083682,0.972426868273176,1.88651846365184,2.02227859295016,2.22246727801615,2.06035057238894,1.92551525755089,2.02157769411038,3.04175159868288,1.69763707247469,1.12369808963859,1.85672941974121,0.746661096422973,1.42888107384922,1.73826488917283,1.3503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|phase1_expression=2.7225304007815,0,0,0,0,0.33575854382378,0.467225281191051,0.129123323441576,0.281577444303333,0.468129052643987,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.595303031057488,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.485510353031154,0.377690453926732,0.709638518536602,0.917733760808408,1.56478268869608,1.52617609466313,1.75748946187577,0.58328969722285,1.25987779462826,0,0,0,0,0,0.573066879877513,0.515672092277442,10.9250888864183,16.398720357433,8.87363964908651,1.35537812827653,1.77858959222228,0.449949858640699,0,0.7104801149461,1.49800055259202,1.15265491596466,3.83651565541367,4.86021377994086,2.52389953621658,7.14127461009509,6.62605622854841,4.04219637409348,2.97120960156533,6.43453150627015,0,1.27687338085188,1.22885226604995,9.36392642884376,9.60620257825301,11.4600941522487,1.67509799400829,1.12552522006336,1.5279824777681,3.83017161115768,3.98640706237488,4.10078780815661,0.681535739998656,1.96486056277642,0.289864488701678,0.860423876981386,0,0,0,0,0.702222100658759,0.170430322578058,0.259786004602869,0,1.69012103732017,0,0,0,0,0,0.505524445014783,0.22836775943812,0.517875767294343,0.29688427812965,1.56136794089522,1.82679286987285,0.230615497256059,0.753613202763113,1.17588707135705,0.628332956648377,0.247194967734374,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,0,0.41889341362691,0,0.718890747035522,0.599902730993408,0.381210681219194,2.54644086988199,1.37250180845588,7.03664371832041,0.869121600961382,1.53429274398198,1.45451631191692,2.10913641988085,2.34230536855727,0.746441823660558,0,0.420883711772948,1.95180664444056,0.689706313300419,3.78130472591233,2.10986744970001,3.40182495756639,2.8185018462667,3.74806898238915,0.258703370739016,1.07783996466421,1.89106080167819,2.46331573829528,1.31517439456545,1.94633074457919,1.0447564995665,1.85203922767149,1.79130840136644,0,0.772043721344145,0.284163499395593,0.621377317606506,0.469052119962192,0.36012412292203,0.473489471170421,1.37734962223183,0.925602677324269,0.232533944750408,1.07309360559848,0.934122738937356,0.329119699826961,0.656669856316381,0.810688095458557,0.292399974850665,0.219550115291051,0.402619256281115,0.630869845692382,7.51203670368776,0,0,0.639864751605702,1.16118335930219,1.28867461322093,1.00841762311671,0.22237804384487,0.190225626112559,0,0.658795818896044,0.502670417600539,0.795825888164603,0.779856348476481,0,0.216138049874694,0,1.13800740571849,1.14248512609729,0,0.407302655690628,0.581857461502877,1.68325967736765,0.632365371242573,0,0,0.246794327843601,0,0,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.37898282354097,0.814824882210129,0.848725428875941,1.17345124144251,1.00503754465089,0.952174563544055,0.780534591431195,0.788175720530955,0.664394068946325,1.2756381492599,1.47476983244164,0.518054945597687,0.578596234326046,0,0.54390568381871,0,0.275936746304732,1.28440471990234,2.22702204525186,0,0.252470927204373,1.26203287766503,2.34263246577983,1.72338718186239,0.477937595905104,2.67358408898873,3.67999490025482,2.42886421004937,1.75353514746787,1.58115111178609,3.85585579706168,0.99358059645788,2.13678724400706,2.44330439030364,0.989820737835213,0,0.971122544619926,0.302323556964751,0.565815239267694,0.885905678642318,1.53717573971964,1.55056975900933,0.727067458955011,0.356497378384721,0,0,0,0.340439605753788,2.16073312837572,2.19909762430683,1.50035924522115,0.709360934569094,2.31879462882692,1.81003922662333,1.522324745573,0.469343416127421,0.847328283455281,0,0.49465875882444,1.61464426695906,0.482503399425247,0.596861720015682,0.656563598980245,0.874442509889552,1.29797711407357,0.170870880797853,1.23832120777933,1.29636169158798,0,0.136694227721025,0.228778173206523,0.339956859987711,0.559805809294632,0.829199842826543,0,2.37251995185852,0.813277868507395,0.86404272657441,0.209088296014469,0.655087691238533,0.674321731924103,0.743881101528023,0.26175594198403,0.259229946583586,0.621339313086926,2.81846469342095,1.79419855252775,0.330916980914195,1.36115831840833,2.71235629303235,0.506868376472335,1.40828686374905,1.95306577265925,1.36317147753424,0.966336483304024,1.15212002503146,0,1.41907650703115,0.102710957164827,0.25984164595559,0.358053391334963,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.192423683280659,0,0.680191150845634,0,0.179427713218951,0,0.386379188064381,0.187682475451182,1.09890974560359,0.643105137237198,0.501572104035363,1.12950368523413,3.22227665555024,1.71868654031819,2.749650917499,0.685082519770642,0,2.02506750069542,2.2516060161211,2.26571204492102,1.03552062350364,0.93408612825759,5.58634822761443,3.58540572083682,0.972426868273176,1.88651846365184,2.02227859295016,2.22246727801615,2.06035057238894,1.92551525755089,2.02157769411038,3.04175159868288,1.69763707247469,1.12369808963859,1.85672941974121,0.746661096422973,1.42888107384922,1.73826488917283,1.3503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|short_description=p3@Ralgds
}}
}}

Latest revision as of 12:00, 26 September 2015

Short description:p3@Ralgds
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ralgds_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000135803_5end
EntrezGene:Ralgds
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ralgds

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C310.93
Mouse Granule cells, donor2.CNhs12357.11731-123E316.40
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F91.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G83.75
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G17.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron7.81e-1833
neuronal stem cell7.81e-1833
neuroblast7.81e-1833
electrically signaling cell7.81e-1833
ectodermal cell1.47e-1744
neurectodermal cell1.47e-1744
neural cell3.45e-1743
CNS neuron (sensu Vertebrata)1.92e-1423
neuroblast (sensu Vertebrata)1.92e-1423
electrically responsive cell4.33e-1339
electrically active cell4.33e-1339

Uber anatomy
Ontology termp-valuen
central nervous system1.66e-2373
nervous system2.09e-2375
ectoderm-derived structure1.70e-2195
ectoderm1.70e-2195
presumptive ectoderm1.70e-2195
neurectoderm1.27e-1964
neural plate1.27e-1964
presumptive neural plate1.27e-1964
ecto-epithelium1.36e-1773
neural tube1.78e-1652
neural rod1.78e-1652
future spinal cord1.78e-1652
neural keel1.78e-1652
regional part of nervous system5.56e-1654
pre-chordal neural plate2.53e-1449
gray matter1.07e-1334
brain2.50e-1347
future brain2.50e-1347
regional part of brain1.22e-1246
anterior neural tube1.57e-1240
structure with developmental contribution from neural crest4.02e-1292
regional part of forebrain6.05e-1239
forebrain6.05e-1239
future forebrain6.05e-1239
brain grey matter5.33e-1029
regional part of telencephalon5.33e-1029
telencephalon5.33e-1029
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