FFCP PHASE1:Mm9::chr4:138013520..138013534,+: Difference between revisions
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|id=chr4:138013520..138013534,+
|short_description=p@chr4:138013520..138013534,+
|description=CAGE_peak_at_chr4:138013520..138013534,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=135 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:138013520..138013534,+ | |||
|description=CAGE_peak_at_chr4:138013520..138013534,+ | |||
|id=chr4:138013520..138013534,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.26e-17,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!1.87e-15!49;UBERON:0001049!3.71e-15!52;UBERON:0005068!3.71e-15!52;UBERON:0006241!3.71e-15!52;UBERON:0007135!3.71e-15!52;UBERON:0000955!5.69e-15!50;UBERON:0006238!5.69e-15!50;UBERON:0000033!9.68e-13!63;UBERON:0000073!1.63e-12!75;UBERON:0001016!1.63e-12!75;UBERON:0001017!2.70e-12!73;UBERON:0005743!2.70e-12!73;UBERON:0002020!2.78e-12!34;UBERON:0002021!3.19e-12!10;UBERON:0000411!3.19e-12!10;UBERON:0001950!3.19e-12!10;UBERON:0002346!5.28e-12!71;UBERON:0003075!5.28e-12!71;UBERON:0007284!5.28e-12!71;UBERON:0003080!1.11e-11!40;UBERON:0003056!5.81e-11!49;UBERON:0002780!6.61e-11!39;UBERON:0001890!6.61e-11!39;UBERON:0006240!6.61e-11!39;UBERON:0002791!1.24e-10!29;UBERON:0003528!1.24e-10!29;UBERON:0001893!1.24e-10!29;UBERON:0004121!1.64e-10!102;UBERON:0000924!1.64e-10!102;UBERON:0006601!1.64e-10!102;UBERON:0002619!6.61e-09!17;UBERON:0000025!1.04e-08!114;UBERON:0000956!4.31e-08!21;UBERON:0001869!4.31e-08!21;UBERON:0000203!4.31e-08!21;UBERON:0007811!1.27e-07!86;UBERON:0002298!1.85e-07!6;UBERON:0004111!1.90e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.09e-29,10;UBERON:0000411,2.09e-29,10;UBERON:0001950,2.09e-29,10;UBERON:0000956,9.99e-18,21;UBERON:0001869,9.99e-18,21;UBERON:0000203,9.99e-18,21;UBERON:0004684,2.26e-17,3;UBERON:0002275,2.26e-17,3;UBERON:0002619,4.34e-17,17;UBERON:0003528,5.72e-16,29;UBERON:0002791,5.72e-16,29;UBERON:0001893,5.72e-16,29;UBERON:0000073,1.91e-14,54;UBERON:0002020,1.79e-13,34;UBERON:0002780,1.30e-11,39;UBERON:0001890,1.30e-11,39;UBERON:0006240,1.30e-11,39;UBERON:0003080,2.69e-11,40;UBERON:0001017,2.69e-10,73;UBERON:0001016,5.56e-10,75;UBERON:0002616,1.10e-09,46;UBERON:0000955,1.87e-09,47;UBERON:0006238,1.87e-09,47;UBERON:0003056,5.02e-09,49;UBERON:0001049,1.93e-08,52;UBERON:0005068,1.93e-08,52;UBERON:0006241,1.93e-08,52;UBERON:0007135,1.93e-08,52;UBERON:0004121,1.51e-07,95;UBERON:0000924,1.51e-07,95;UBERON:0006601,1.51e-07,95;UBERON:0001851,4.21e-07,1;UBERON:0005889,4.21e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0.0958454710182364,0,1.10115880999389,1.0214987046815,1.0752457327937,0.131886287730194,0,0,0.837548997004143,1.68828783009504,0.15279824777681,0,0.569486723196412,0.372798891650601,0,0.0755715601067855,0,0,0,1.07940638327563,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0,1.21677024134594,1.27857728665165,0.41557608911912,0.811206315338788,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0.630869845692382,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0,0.295220295959204,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0.358794827043824,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0,0,0,0.604647113929502,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0.164140899745061,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.920650473014354,0,6.70227411140382,0.685082519770642,1.5107877947794,2.02506750069542,1.35096360967266,1.81256963593682,2.5888015587591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0.412085900803307,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0.0958454710182364,0,1.10115880999389,1.0214987046815,1.0752457327937,0.131886287730194,0,0,0.837548997004143,1.68828783009504,0.15279824777681,0,0.569486723196412,0.372798891650601,0,0.0755715601067855,0,0,0,1.07940638327563,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0,1.21677024134594,1.27857728665165,0.41557608911912,0.811206315338788,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0.630869845692382,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0,0.295220295959204,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0.358794827043824,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0,0,0,0.604647113929502,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0.164140899745061,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.920650473014354,0,6.70227411140382,0.685082519770642,1.5107877947794,2.02506750069542,1.35096360967266,1.81256963593682,2.5888015587591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0.412085900803307,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:138013520..138013534,+ | |||
}} | }} |
Latest revision as of 01:03, 5 August 2015
Short description: | p@chr4:138013520..138013534, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:138013520..138013534, + |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.26e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.09e-29 | 10 |
visual cortex | 2.09e-29 | 10 |
neocortex | 2.09e-29 | 10 |
cerebral cortex | 9.99e-18 | 21 |
cerebral hemisphere | 9.99e-18 | 21 |
pallium | 9.99e-18 | 21 |
raphe nuclei | 2.26e-17 | 3 |
reticular formation | 2.26e-17 | 3 |
regional part of cerebral cortex | 4.34e-17 | 17 |
brain grey matter | 5.72e-16 | 29 |
regional part of telencephalon | 5.72e-16 | 29 |
telencephalon | 5.72e-16 | 29 |
regional part of nervous system | 1.91e-14 | 54 |
gray matter | 1.79e-13 | 34 |
regional part of forebrain | 1.30e-11 | 39 |
forebrain | 1.30e-11 | 39 |
future forebrain | 1.30e-11 | 39 |
anterior neural tube | 2.69e-11 | 40 |
central nervous system | 2.69e-10 | 73 |
nervous system | 5.56e-10 | 75 |
regional part of brain | 1.10e-09 | 46 |
brain | 1.87e-09 | 47 |
future brain | 1.87e-09 | 47 |
pre-chordal neural plate | 5.02e-09 | 49 |
neural tube | 1.93e-08 | 52 |
neural rod | 1.93e-08 | 52 |
future spinal cord | 1.93e-08 | 52 |
neural keel | 1.93e-08 | 52 |
ectoderm-derived structure | 1.51e-07 | 95 |
ectoderm | 1.51e-07 | 95 |
presumptive ectoderm | 1.51e-07 | 95 |
cortex | 4.21e-07 | 1 |
zygote cortex | 4.21e-07 | 1 |