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FFCP PHASE1:Mm9::chr4:49644918..49644982,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:49644918..49644982,+
|DHSsupport=NA
|short_description=p1@Rnf20
|DPIdataset=NA
|description=CAGE_peak_1_at_Rnf20_5end
|association_with_transcript=0bp_to_ENSMUST00000029989,ENSMUST00000098079,ENSMUST00000146547,ENSMUST00000156314,ENSMUST00000167496,NM_001163263,NM_182999,uc008svy.2,uc008svz.2,uc008swa.2,uc008swb.2,uc012dec.1_5end
|EntrezGene=109331
|EntrezGene=109331
|HGNC=
|HGNC=
|MCL_coexpression_id=2991
|TSSclassifier=NA
|UniProt=Q5DTM8,A2AIR1,A2AIR2,A2AIR0
|UniProt=Q5DTM8,A2AIR1,A2AIR2,A2AIR0
|association_with_transcript=0bp_to_ENSMUST00000029989,ENSMUST00000098079,ENSMUST00000146547,ENSMUST00000156314,ENSMUST00000167496,NM_001163263,NM_182999,uc008svy.2,uc008svz.2,uc008swa.2,uc008swb.2,uc012dec.1_5end
|cluster_id=chr4:49644918..49644982,+
|description=CAGE_peak_1_at_Rnf20_5end
|id=chr4:49644918..49644982,+
|ontology_enrichment_celltype=CL:0000791!4.52e-07!9;CL:0000789!4.52e-07!9;CL:0002420!4.52e-07!9;CL:0002419!4.52e-07!9;CL:0000790!4.52e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000791,4.52e-07,9;CL:0000789,4.52e-07,9;CL:0002420,4.52e-07,9;CL:0002419,4.52e-07,9;CL:0000790,4.52e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!2.25e-14!94;UBERON:0007811!6.92e-12!86;UBERON:0000033!3.12e-08!63;UBERON:0000475!4.20e-07!200;UBERON:0003056!4.47e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000153,6.88e-08,43;UBERON:0003056,4.47e-07,49;UBERON:0010371,4.80e-07,73
|phase1_expression=42.75974217698,39.0852456556084,39.1299345875001,35.0858485115923,34.561805366298,34.0794921981136,38.7796983388573,66.4985115724118,81.516670125815,88.9445200023575,69.856931036006,65.0143095811992,62.1458649650277,63.2049509489351,32.6447566579349,36.040597595389,32.8794082720229,53.6285681109004,57.9994054152275,41.1657962244089,27.0437662680402,36.1419062371222,32.9111734315059,36.4782723968967,28.4467508523291,40.1962374880514,34.0301976965669,30.8123862740821,23.372880593134,26.2111334950328,21.9513205548752,26.0362576118449,26.4477858661365,31.6963362030877,28.3074587356249,23.9377889316229,25.5211695327961,104.632907684227,78.9148697969038,106.275320026681,129.999158854854,106.555095653518,109.725339785041,38.6503231185022,36.0901875141472,25.6965453026354,11.7358701652206,9.59310688073965,7.0299578475031,16.5265414213141,13.5786828976602,7.18762821824858,53.1870861203024,61.6557820709643,61.8412590422134,16.9791227783725,25.2149427146106,25.7836046138721,33.7868489635528,29.6234948392338,39.2975470173831,8.4711133017283,6.22506357277798,8.99899717281399,8.89979726310277,11.3676818391376,9.28760342607055,9.98967593836042,46.0381878649641,37.3966449178783,41.6443423475736,21.4238238302853,22.9703282589678,39.5645281464302,30.8622416678721,33.0918763179608,42.9451935897616,42.2645089061971,43.7778619780294,40.2253177577091,39.0652238182289,39.5894161623138,28.7558488971422,41.0816705323126,37.7411672008721,48.6137166031552,37.5861237309632,45.6678642271986,30.2904773332736,31.362197444316,57.9728977403356,35.2773789562368,16.319312008986,26.445456390253,27.2906095328021,24.1934519032561,31.1786612692489,22.6672329028817,24.4198844326697,18.0203183000274,38.7319404385871,34.6481489018658,40.7688383530633,42.6640021891999,30.0922547005588,26.0960661439352,29.3204178108574,22.6084081843739,77.4224272105043,33.3994812895856,24.1144604204929,29.2286859179656,25.5983201954225,26.5271847372616,34.8062573121686,22.6199864393416,33.8657105796092,38.3188295837766,33.6152009740952,33.6475047890611,31.5803371398363,31.5168914537894,29.8226817948995,52.99332425909,44.8215952580794,29.1221042937794,42.5343691996017,24.5960119707297,35.7067338075312,46.435098215495,53.0700699269607,49.5078147324686,46.5849178115301,47.3073596061111,39.8953045554355,49.8080677618016,30.1444516996936,37.1976842124178,37.1502454897502,31.987162094744,43.5903483925057,40.6926724847247,43.2149111532838,38.5804333659431,48.9862793889561,50.348692071946,47.1319674535436,55.1038179674103,41.6046226360385,50.4913234048077,49.4422658900696,36.605687315405,44.2095126268701,41.4420078161378,41.3622094179966,34.2338938927808,40.7283648641676,37.058098624519,31.8263119323064,30.4474885627188,33.0681744573346,30.7906125098335,33.1442629819294,31.4822770795846,25.7626078521922,30.6944807070538,29.5100741539581,26.7392634020818,26.4941358360704,22.6551100429151,31.0493540560627,26.9007976862611,33.3716175242397,33.1489854338118,47.1049484783645,49.8058323915737,36.6764849112016,28.8251117663263,34.9792730877784,44.3572043253438,32.6034677144896,32.2693639397348,32.2448163575062,33.8601614480355,23.7264530772256,31.6221993070101,28.903549012031,25.6653848933085,31.5841821132975,38.6492345721315,27.0172562343368,25.6892242498134,22.5704802134167,38.0447546990397,43.9560169125014,36.2499363564659,33.3598277928316,32.8936995285594,35.6654069380811,30.1124701878388,28.887765922813,29.2451278494667,27.2736416920177,32.0342602974901,31.8425572083389,26.084005036643,34.283360514657,33.0412708860811,26.2264627334862,30.4957905697859,25.7795010572306,24.7105271869273,48.8811902193005,24.5613025461212,24.3389385029357,27.2785188182881,25.6538301336334,27.0168371963486,46.5578039219844,36.5718424717036,39.9264192282963,43.6244870442234,40.8361032021994,41.0390330732449,43.3239426412545,39.0267295715598,46.8176377995387,34.7699562748577,43.0527875375215,45.7178648056909,37.6453260467652,39.0552458170081,24.1266054302836,36.9855864996723,38.8493775685039,41.6664486920146,38.6926921870579,47.2363096966579,19.6721934452011,22.7223834483936,28.7112479668794,33.1872932652143,38.560788194171,32.7387253194996,38.7669692903366,42.4614796183249,26.717506310543,39.1622849601158,49.0156844653689,54.3033024752854,39.6012837731069,31.5176118491042,29.971200521058,36.6233672999029,70.3549233201803,28.1625537939778,28.7207379116513,32.0628635585027,31.5973025382427,39.0442637888788,33.0788215255323,28.3556308992454,27.4502981356235,47.4055136903724,54.8176764589994,57.7559042189846,56.8534141608826,39.0732574047943,19.1450851998477,33.4365774649284,38.8375111676579,39.9546151428638,41.4663531917345,21.0080814889074,34.9660845014928,30.7156502752539,58.8810822806748,46.4979233294974,33.7460651794443,36.8511971311032,33.5436286648813,41.1993658360104,26.5247561333164,39.8664399322596,37.2498520139319,32.8155120061524,35.0017656728755,33.7179538038397,38.000995306445,35.2318386738045,42.6645859284577,52.3418431690481,49.1991906743749,21.9574242143476,39.3838312008513,33.7510315430569,33.0496342914712,32.1995975862282,34.2829225081499,28.9958344727365,26.8623731107342,31.4107130380836,25.663764711775,33.552322906694,23.675103424736,32.8936401296753,31.1061962059344,38.1124329154333,28.802640635534,38.3530404864066,37.0848874120583,40.7539724561564,68.9974486321177,41.310884661247,34.8516307572017,48.0336903354831,25.7461023418509,28.8617789633165,32.0904432755154,37.0585260031687,33.775830312815,34.2557031131911,35.1501074675494,44.3242715272368,40.7706415604249,40.8346049804204,46.6823248743414,39.6392787558157,46.9845146769907,37.8639740637403,21.9766093840324,25.65816299031,17.6278847182282,32.2626622033758,35.4719878602734,33.5167472409095,36.8713612015993,57.6807919640668,51.9571695207701,51.5564264888038,40.1026859407578,57.0552565381043,45.2154463048624,40.7912704590438,47.2515750162264,52.2372595740096,51.6582346241993,44.5273868106565,48.0535419314738,43.4937112007124,39.2687293234509,38.1677545797222,34.7957849962451,35.2979536224027,38.670930637481,39.5587309898677,38.5103051510178,34.8722152234041,37.5149363837555,37.159389253057,31.83811253976,32.332701964459,30.6131049533419,36.1983205375136,36.5035626726295,28.1647461877009,30.0822707586414,36.5053321933305,44.9158720624894,32.8330241394774,33.8579389725196,40.696996657052,36.6085489815636,34.4381454119123,33.4758190357174,27.0961802780978,33.0003996645444,52.7473735358274,34.760060310383,35.1661002080762,27.8277109355389,32.8466103314248,34.3373767546432,31.2263222422432,35.3236728752567,35.6685949720175,30.7974214630838,29.118067323776,32.9252326580998
|phase1_expression=42.75974217698,39.0852456556084,39.1299345875001,35.0858485115923,34.561805366298,34.0794921981136,38.7796983388573,66.4985115724118,81.516670125815,88.9445200023575,69.856931036006,65.0143095811992,62.1458649650277,63.2049509489351,32.6447566579349,36.040597595389,32.8794082720229,53.6285681109004,57.9994054152275,41.1657962244089,27.0437662680402,36.1419062371222,32.9111734315059,36.4782723968967,28.4467508523291,40.1962374880514,34.0301976965669,30.8123862740821,23.372880593134,26.2111334950328,21.9513205548752,26.0362576118449,26.4477858661365,31.6963362030877,28.3074587356249,23.9377889316229,25.5211695327961,104.632907684227,78.9148697969038,106.275320026681,129.999158854854,106.555095653518,109.725339785041,38.6503231185022,36.0901875141472,25.6965453026354,11.7358701652206,9.59310688073965,7.0299578475031,16.5265414213141,13.5786828976602,7.18762821824858,53.1870861203024,61.6557820709643,61.8412590422134,16.9791227783725,25.2149427146106,25.7836046138721,33.7868489635528,29.6234948392338,39.2975470173831,8.4711133017283,6.22506357277798,8.99899717281399,8.89979726310277,11.3676818391376,9.28760342607055,9.98967593836042,46.0381878649641,37.3966449178783,41.6443423475736,21.4238238302853,22.9703282589678,39.5645281464302,30.8622416678721,33.0918763179608,42.9451935897616,42.2645089061971,43.7778619780294,40.2253177577091,39.0652238182289,39.5894161623138,28.7558488971422,41.0816705323126,37.7411672008721,48.6137166031552,37.5861237309632,45.6678642271986,30.2904773332736,31.362197444316,57.9728977403356,35.2773789562368,16.319312008986,26.445456390253,27.2906095328021,24.1934519032561,31.1786612692489,22.6672329028817,24.4198844326697,18.0203183000274,38.7319404385871,34.6481489018658,40.7688383530633,42.6640021891999,30.0922547005588,26.0960661439352,29.3204178108574,22.6084081843739,77.4224272105043,33.3994812895856,24.1144604204929,29.2286859179656,25.5983201954225,26.5271847372616,34.8062573121686,22.6199864393416,33.8657105796092,38.3188295837766,33.6152009740952,33.6475047890611,31.5803371398363,31.5168914537894,29.8226817948995,52.99332425909,44.8215952580794,29.1221042937794,42.5343691996017,24.5960119707297,35.7067338075312,46.435098215495,53.0700699269607,49.5078147324686,46.5849178115301,47.3073596061111,39.8953045554355,49.8080677618016,30.1444516996936,37.1976842124178,37.1502454897502,31.987162094744,43.5903483925057,40.6926724847247,43.2149111532838,38.5804333659431,48.9862793889561,50.348692071946,47.1319674535436,55.1038179674103,41.6046226360385,50.4913234048077,49.4422658900696,36.605687315405,44.2095126268701,41.4420078161378,41.3622094179966,34.2338938927808,40.7283648641676,37.058098624519,31.8263119323064,30.4474885627188,33.0681744573346,30.7906125098335,33.1442629819294,31.4822770795846,25.7626078521922,30.6944807070538,29.5100741539581,26.7392634020818,26.4941358360704,22.6551100429151,31.0493540560627,26.9007976862611,33.3716175242397,33.1489854338118,47.1049484783645,49.8058323915737,36.6764849112016,28.8251117663263,34.9792730877784,44.3572043253438,32.6034677144896,32.2693639397348,32.2448163575062,33.8601614480355,23.7264530772256,31.6221993070101,28.903549012031,25.6653848933085,31.5841821132975,38.6492345721315,27.0172562343368,25.6892242498134,22.5704802134167,38.0447546990397,43.9560169125014,36.2499363564659,33.3598277928316,32.8936995285594,35.6654069380811,30.1124701878388,28.887765922813,29.2451278494667,27.2736416920177,32.0342602974901,31.8425572083389,26.084005036643,34.283360514657,33.0412708860811,26.2264627334862,30.4957905697859,25.7795010572306,24.7105271869273,48.8811902193005,24.5613025461212,24.3389385029357,27.2785188182881,25.6538301336334,27.0168371963486,46.5578039219844,36.5718424717036,39.9264192282963,43.6244870442234,40.8361032021994,41.0390330732449,43.3239426412545,39.0267295715598,46.8176377995387,34.7699562748577,43.0527875375215,45.7178648056909,37.6453260467652,39.0552458170081,24.1266054302836,36.9855864996723,38.8493775685039,41.6664486920146,38.6926921870579,47.2363096966579,19.6721934452011,22.7223834483936,28.7112479668794,33.1872932652143,38.560788194171,32.7387253194996,38.7669692903366,42.4614796183249,26.717506310543,39.1622849601158,49.0156844653689,54.3033024752854,39.6012837731069,31.5176118491042,29.971200521058,36.6233672999029,70.3549233201803,28.1625537939778,28.7207379116513,32.0628635585027,31.5973025382427,39.0442637888788,33.0788215255323,28.3556308992454,27.4502981356235,47.4055136903724,54.8176764589994,57.7559042189846,56.8534141608826,39.0732574047943,19.1450851998477,33.4365774649284,38.8375111676579,39.9546151428638,41.4663531917345,21.0080814889074,34.9660845014928,30.7156502752539,58.8810822806748,46.4979233294974,33.7460651794443,36.8511971311032,33.5436286648813,41.1993658360104,26.5247561333164,39.8664399322596,37.2498520139319,32.8155120061524,35.0017656728755,33.7179538038397,38.000995306445,35.2318386738045,42.6645859284577,52.3418431690481,49.1991906743749,21.9574242143476,39.3838312008513,33.7510315430569,33.0496342914712,32.1995975862282,34.2829225081499,28.9958344727365,26.8623731107342,31.4107130380836,25.663764711775,33.552322906694,23.675103424736,32.8936401296753,31.1061962059344,38.1124329154333,28.802640635534,38.3530404864066,37.0848874120583,40.7539724561564,68.9974486321177,41.310884661247,34.8516307572017,48.0336903354831,25.7461023418509,28.8617789633165,32.0904432755154,37.0585260031687,33.775830312815,34.2557031131911,35.1501074675494,44.3242715272368,40.7706415604249,40.8346049804204,46.6823248743414,39.6392787558157,46.9845146769907,37.8639740637403,21.9766093840324,25.65816299031,17.6278847182282,32.2626622033758,35.4719878602734,33.5167472409095,36.8713612015993,57.6807919640668,51.9571695207701,51.5564264888038,40.1026859407578,57.0552565381043,45.2154463048624,40.7912704590438,47.2515750162264,52.2372595740096,51.6582346241993,44.5273868106565,48.0535419314738,43.4937112007124,39.2687293234509,38.1677545797222,34.7957849962451,35.2979536224027,38.670930637481,39.5587309898677,38.5103051510178,34.8722152234041,37.5149363837555,37.159389253057,31.83811253976,32.332701964459,30.6131049533419,36.1983205375136,36.5035626726295,28.1647461877009,30.0822707586414,36.5053321933305,44.9158720624894,32.8330241394774,33.8579389725196,40.696996657052,36.6085489815636,34.4381454119123,33.4758190357174,27.0961802780978,33.0003996645444,52.7473735358274,34.760060310383,35.1661002080762,27.8277109355389,32.8466103314248,34.3373767546432,31.2263222422432,35.3236728752567,35.6685949720175,30.7974214630838,29.118067323776,32.9252326580998
|short_description=p1@Rnf20
}}
}}

Latest revision as of 02:11, 27 September 2015

Short description:p1@Rnf20
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rnf20_5end
Coexpression cluster:MCL_coexpression_mm9:2991
Association with transcript: 0bp_to_ENSMUST00000029989, ENSMUST00000098079, ENSMUST00000146547, ENSMUST00000156314, ENSMUST00000167496, NM_001163263, NM_182999, uc008svy.2, uc008svz.2, uc008swa.2, uc008swb.2, uc012dec.1_5end
EntrezGene:Rnf20
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rnf20

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G742.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I539.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I639.13
CD326+ enterocyte, pool1.CNhs13542.11848-124I335.09
CD326+ enterocyte, pool2.CNhs13197.11849-124I434.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I734.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I838.78
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E966.50
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E781.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F288.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E669.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F165.01
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E462.15
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E863.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A132.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A336.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A532.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A253.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A458.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A641.17
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A327.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H236.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I932.91
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D136.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D228.45
GP2+ M cell, pool1.CNhs13228.11845-124H940.20
GP2+ M cell, pool2.CNhs13231.11846-124I134.03
GP2+ M cell, pool3.CNhs13240.11847-124I230.81
Ileum epithelium, pool1.CNhs13199.10252-104B923.37
Ileum epithelium, pool2.CNhs13232.10253-104C126.21
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C821.95
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I326.04
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G626.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F528.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F623.94
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F725.52
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8104.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H178.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3106.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9130.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2106.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4109.73
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D838.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D936.09
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B325.70
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.59
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.03
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A253.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I961.66
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A161.84
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E125.21
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.78
Mouse Granule cells, donor1.CNhs12131.11713-123C333.79
Mouse Granule cells, donor2.CNhs12357.11731-123E329.62
Mouse Granule cells, donor3.CNhs12108.11636-122C739.30
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.47
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C89.29
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D546.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F537.40
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D941.64
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F121.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.97
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D239.56
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F230.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D633.09
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D342.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F342.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D743.78
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D440.23
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F439.07
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D839.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E428.76
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E541.08
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I637.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D648.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F637.59
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E145.67
Mouse Schwann, donor1.CNhs12507.11728-123D930.29
Mouse Schwann, donor2.CNhs12573.11746-123F931.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G357.97
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F735.28
Mouse hepatocyte, donor1.CNhs13078.11714-123C416.32
Mouse hepatocyte, donor3.CNhs12615.11637-122C826.45
Mouse hepatocyte, donor6.CNhs13090.11822-124F427.29
Mouse hepatocyte, donor8.CNhs13091.11824-124F624.19
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A731.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I722.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E324.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I818.02
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G638.73
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H134.65
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I840.77
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G130.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G226.10
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G329.32
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B622.61
accessory axillary lymph node, adult.CNhs10475.1063-29H977.42
adrenal gland, adult.CNhs10508.49-24D733.40
adrenal gland, embryo E14.CNhs11038.406-44C524.11
adrenal gland, embryo E16.CNhs11004.1254-43D629.23
adrenal gland, embryo E17.CNhs11043.1263-45I125.60
adrenal gland, embryo E18.CNhs11026.1262-18F526.53
adrenal gland, neonate N00.CNhs11191.1311-23C134.81
adrenal gland, neonate N25.CNhs11223.1377-27I322.62
amnion, adult pregnant day17.5.CNhs10488.583-22A833.87
aorta, adult.CNhs10498.46-23H138.32
bone (os femoris), adult.CNhs10483.56-12G233.62
bone (os femoris), neonate N02.CNhs11227.1985-43F533.65
bone (os femoris), neonate N16.CNhs11225.1525-43A631.58
bone (os femoris), neonate N20.CNhs11195.1350-25C331.52
cecum, adult.CNhs10467.37-13H429.82
cerebellum, adult.CNhs10494.15-8B252.99
cerebellum, neonate N30.CNhs11135.1395-42I244.82
colon, adult.CNhs10468.36-18H729.12
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C742.53
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D124.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D435.71
corpora quadrigemina, adult.CNhs10501.16-22A446.44
corpus striatum, adult.CNhs10487.19-21D853.07
corpus striatum, neonate N00.CNhs11226.630-43F149.51
cortex, adult.CNhs10473.12-14D546.58
cortex, neonate N30.CNhs11107.1392-42F247.31
diencephalon, adult.CNhs10482.20-12F239.90
diencephalon, neonate N30.CNhs11201.1388-42B249.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A237.20
epididymis, adult.CNhs10490.58-23B237.15
eyeball, adult.CNhs10484.31-12G431.99
eyeball, embryo E12.CNhs11016.345-16C643.59
eyeball, embryo E14.CNhs10521.399-16E240.69
eyeball, embryo E15.CNhs10593.426-16C943.21
eyeball, embryo E17.CNhs11023.1261-18D438.58
eyeball, neonate N00.CNhs11207.633-15C648.99
eyeball, neonate N01.CNhs11140.1532-43E750.35
eyeball, neonate N02.CNhs11205.1551-44G847.13
eyeball, neonate N16.CNhs11188.777-19A255.10
forelimb, embryo E11.CNhs10596.335-25E241.60
forelimb, embryo E12.CNhs10600.359-14H250.49
forelimb, embryo E13.CNhs10589.384-1E249.44
forelimb, embryo E14.CNhs10577.413-26A836.61
forelimb, embryo E15.CNhs11007.437-20E744.21
forelimb, embryo E17.CNhs10598.1517-43C441.44
forelimb, embryo E18.CNhs11008.1520-43B541.36
gonad, embryo E13.CNhs11044.1564-45I634.23
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C840.73
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D237.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D531.83
heart, embryo E11.CNhs10586.331-24E930.45
heart, embryo E12.CNhs11015.353-12F533.07
heart, embryo E13.CNhs11013.376-3I930.79
heart, embryo E14.CNhs10597.403-26D433.14
heart, embryo E15.CNhs11017.431-16C831.48
heart, embryo E16.CNhs11021.457-17C625.76
heart, embryo E17.CNhs11025.479-18E530.69
heart, embryo E18.CNhs11030.1283-20G329.51
heart, neonate N00.CNhs11213.639-21E326.74
heart, neonate N03.CNhs11221.1349-25I226.49
heart, neonate N10.CNhs11118.749-24G122.66
heart, neonate N16.CNhs11209.782-15G131.05
heart, neonate N20.CNhs11127.821-26I626.90
heart, neonate N25.CNhs11196.1351-25D333.37
heart, neonate N30.CNhs11202.1390-42D233.15
hippocampus, adult.CNhs10478.13-16E847.10
hippocampus, neonate N00.CNhs11228.627-43G149.81
intestinal mucosa, adult.CNhs10506.860-29I336.68
intestine, adult.CNhs10496.178-9A328.83
intestine, embryo E12.CNhs11019.1251-16I534.98
intestine, embryo E13.CNhs11010.381-16D544.36
intestine, embryo E15.CNhs10602.976-16D832.60
intestine, embryo E16.CNhs10585.463-22H432.27
intestine, embryo E17.CNhs10582.482-18D332.24
intestine, embryo E18.CNhs10526.1289-20F733.86
intestine, neonate N00.CNhs11126.644-26D123.73
intestine, neonate N01.CNhs11192.1322-23E931.62
intestine, neonate N06.CNhs11102.688-20B828.90
intestine, neonate N07.CNhs11095.720-20F225.67
intestine, neonate N10.CNhs11098.755-23A531.58
intestine, neonate N20.CNhs11187.827-18D138.65
intestine, neonate N25.CNhs11121.1352-25E327.02
intestine, neonate N30.CNhs11131.1384-42G125.69
kidney, embryo E14.CNhs10606.411-4I922.57
kidney, embryo E15.CNhs10997.434-16F838.04
kidney, embryo E16.CNhs10584.464-22A543.96
kidney, embryo E17.CNhs11028.483-18I236.25
kidney, embryo E18.CNhs11001.1288-20C733.36
kidney, neonate N00.CNhs11214.646-21G732.89
kidney, neonate N10.CNhs11206.758-6D535.67
kidney, neonate N20.CNhs11113.832-19I130.11
kidney, neonate N25.CNhs11122.1353-25F328.89
kidney, neonate N30.CNhs11203.1385-42H129.25
liver, adult pregnant day01.CNhs10466.508-5B227.27
liver, embryo E12.CNhs10601.355-15F832.03
liver, embryo E13.CNhs10524.378-3H631.84
liver, embryo E14.CNhs10594.409-16E126.08
liver, embryo E15.CNhs10520.433-16D734.28
liver, embryo E16.CNhs10523.462-17F533.04
liver, embryo E17.CNhs10510.481-18A326.23
liver, embryo E18.CNhs10579.499-43G430.50
liver, neonate N00.CNhs11117.641-24F425.78
liver, neonate N03.CNhs11123.1345-25G224.71
liver, neonate N06.CNhs11101.684-20A848.88
liver, neonate N07.CNhs11103.716-20H224.56
liver, neonate N10.CNhs11115.751-24B924.34
liver, neonate N20.CNhs11220.823-25A327.28
liver, neonate N25.CNhs11198.1368-26H125.65
liver, neonate N30.CNhs11106.1382-42D127.02
lung, adult.CNhs10474.28-22B146.56
lung, embryo E12.CNhs10522.354-16G236.57
lung, embryo E14.CNhs10604.404-26F839.93
lung, embryo E15.CNhs11020.432-17C543.62
lung, embryo E16.CNhs10998.458-17B640.84
lung, embryo E17.CNhs10605.480-44A641.04
lung, embryo E18.CNhs10583.1287-20I643.32
lung, neonate N00.CNhs11224.640-42C639.03
lung, neonate N06.CNhs11212.683-20E546.82
lung, neonate N07.CNhs11111.715-19A334.77
lung, neonate N10.CNhs11219.750-23E643.05
lung, neonate N20.CNhs11109.822-18A445.72
lung, neonate N25.CNhs11119.1359-25C737.65
lung, neonate N30.CNhs11133.1394-42H239.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A136.99
mammary gland, adult lactating day02.CNhs10480.595-22B638.85
mammary gland, adult pregnant day19.CNhs10476.588-5H241.67
medulla oblongata, adult.CNhs10477.17-12C238.69
medulla oblongata, neonate N30.CNhs11200.1396-42A347.24
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C719.67
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C222.72
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E128.71
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E233.19
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E338.56
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D732.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D838.77
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D942.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D426.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D539.16
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D649.02
olfactory brain, adult.CNhs10489.18-22I954.30
ovary, adult.CNhs10507.91-2I739.60
ovary, embryo E18.CNhs11040.505-44H731.52
ovary, neonate N00.CNhs11217.1299-22I429.97
oviduct, adult pregnant day01.CNhs10500.988-6G636.62
pancreas, adult.CNhs10486.34-16E470.35
pancreas, embryo E14.CNhs11012.405-44F428.16
pancreas, embryo E15.CNhs11042.1556-45F228.72
pancreas, embryo E16.CNhs11003.460-26E532.06
pancreas, embryo E17.CNhs10599.1558-45G331.60
pancreas, embryo E18.CNhs10580.1535-43I739.04
pancreas, neonate N00.CNhs11105.645-26G933.08
pancreas, neonate N01.CNhs11138.1531-43D728.36
pancreas, neonate N02.CNhs11139.1539-43D827.45
pancreas, neonate N16.CNhs11136.787-43B647.41
pancreas, neonate N25.CNhs11094.1555-45E254.82
pancreas, neonate N30.CNhs11182.1548-44H557.76
pituitary gland, adult.CNhs10493.21-1G856.85
pituitary gland, embryo E12.CNhs11018.346-16E639.07
pituitary gland, embryo E13.CNhs11009.370-44C719.15
pituitary gland, embryo E14.CNhs11037.398-44A533.44
pituitary gland, embryo E15.CNhs10592.427-16B938.84
pituitary gland, embryo E16.CNhs11036.449-43F639.95
pituitary gland, embryo E17.CNhs11039.1265-44F541.47
pituitary gland, neonate N00.CNhs11190.1308-22E921.01
placenta, adult pregnant day10.CNhs10472.539-13I734.97
placenta, adult pregnant day17.CNhs10464.577-18G330.72
prostate, adult.CNhs10470.859-1F858.88
skin, adult.CNhs10492.30-1C346.50
skin, neonate N00.CNhs11124.650-25G433.75
skin, neonate N03.CNhs11215.662-22H336.85
skin, neonate N06.CNhs11097.693-20I533.54
skin, neonate N10.CNhs11108.762-6C441.20
small intestine, neonate N16.CNhs11114.790-21I126.52
spinal cord, adult.CNhs10505.24-13C939.87
spleen, adult.CNhs10465.25-2G237.25
spleen, embryo E16.CNhs11035.461-43C132.82
spleen, embryo E18.CNhs11011.1271-21F235.00
spleen, neonate N10.CNhs11116.752-24D133.72
spleen, neonate N20.CNhs11112.824-19H138.00
spleen, neonate N25.CNhs11099.1354-25G335.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C642.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C952.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D349.20
stomach, adult.CNhs10503.33-1H621.96
stomach, embryo E12.CNhs10588.356-43E339.38
stomach, embryo E15.CNhs10603.1252-16G833.75
stomach, embryo E16.CNhs11022.459-17D433.05
stomach, embryo E17.CNhs11006.1035-18D532.20
stomach, embryo E18.CNhs10999.1286-20C634.28
stomach, neonate N03.CNhs11193.1340-24B829.00
stomach, neonate N07.CNhs11210.718-18A926.86
stomach, neonate N25.CNhs11104.1355-25E431.41
stomach, neonate N30.CNhs11134.1386-42I125.66
submandibular gland, adult.CNhs10469.59-29C133.55
testis, adult.CNhs10504.57-7G523.68
testis, embryo E13.CNhs11031.389-23F532.89
testis, embryo E15.CNhs11034.443-27C531.11
testis, embryo E16.CNhs11033.470-26G538.11
testis, embryo E17.CNhs11029.486-18I528.80
testis, embryo E18.CNhs11027.503-18G538.35
testis, neonate N00.CNhs11189.1300-22B737.08
testis, neonate N07.CNhs11222.726-26I440.75
testis, neonate N10.CNhs11204.763-44D969.00
testis, neonate N20.CNhs11110.839-18H341.31
testis, neonate N30.CNhs11130.1391-42E234.85
thymus, adult.CNhs10471.38-12B548.03
thymus, embryo E14.CNhs11041.402-44I425.75
thymus, embryo E15.CNhs11005.430-45I228.86
thymus, embryo E16.CNhs11002.456-26C532.09
thymus, embryo E17.CNhs10581.478-18C137.06
thymus, embryo E18.CNhs10595.1273-19G433.78
thymus, neonate N02.CNhs11181.1541-43F834.26
thymus, neonate N03.CNhs11137.2104-43C735.15
thymus, neonate N06.CNhs11197.681-26C444.32
thymus, neonate N07.CNhs11211.713-19D340.77
thymus, neonate N10.CNhs11194.748-24E440.83
thymus, neonate N20.CNhs11186.820-7A246.68
thymus, neonate N25.CNhs11125.1362-25G739.64
thymus, neonate N30.CNhs11132.1393-42G246.98
tongue, adult.CNhs10499.32-1B437.86
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H321.98
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F725.66
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.63
urinary bladder, adult.CNhs10481.879-12E432.26
uterus, adult pregnant day19.CNhs10497.590-15F535.47
uterus, adult.CNhs10509.92-27E533.52
vagina, adult.CNhs10502.89-27D536.87
vesicular gland, adult.CNhs10491.51-27F857.68
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A151.96
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A251.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A340.10
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D757.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A445.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.79
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A647.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A752.24
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A851.66
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A944.53
whole body, embryo E11.CNhs11014.324-5I848.05
whole body, embryo E12.CNhs10587.857-27C943.49
whole body, embryo E13.CNhs10512.372-23H239.27
whole body, embryo E14.5.CNhs10578.420-27D238.17
whole body, embryo E14.CNhs10519.395-14B134.80
whole body, embryo E16.CNhs10514.453-14F235.30
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G538.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G539.56
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G538.51
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G534.87
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G537.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G537.16
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G531.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G532.33
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G536.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G536.50
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G528.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G530.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G536.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G544.92
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G532.83
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G533.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G540.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G536.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G534.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G533.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G527.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G533.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G552.75
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G534.76
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G535.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.83
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G532.85
whole body, embryo E17.5.CNhs10513.490-9F934.34
whole body, embryo E17.CNhs10517.475-3I531.23
whole body, embryo E18.CNhs10516.493-3B335.32
whole body, neonate N00.CNhs10525.657-19C235.67
whole body, neonate N01.CNhs10576.659-23C630.80
whole body, neonate N06.CNhs10515.692-21D129.12
whole body, neonate N10.CNhs10518.761-6B432.93





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell4.52e-079
alpha-beta T cell4.52e-079
immature T cell4.52e-079
mature T cell4.52e-079
immature alpha-beta T cell4.52e-079

Uber anatomy
Ontology termp-valuen
anterior region of body6.88e-0843
pre-chordal neural plate4.47e-0749
ecto-epithelium4.80e-0773
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