FFCP PHASE2:Mm9::chr19:5663674..5663694,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:20469 |HGNC= |MCL_coexpression_id=3211 |TSSclassifier=NA |UniProt=uniprot:E9Q0Y4,uniprot:F6Q641,uniprot:Q3UE96,unip...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=20469 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3211 | |MCL_coexpression_id=3211 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=E9Q0Y4,F6Q641,Q3UE96,Q3V403 | ||
|association_with_transcript=12bp_to_ENSMUST00000071857,ENSMUST00000080824,ENSMUST00000163953,ENSMUST00000164304,ENSMUST00000169854,NM_001164480,NM_001164481,NM_001164482,NM_001164568,NM_011379,uc008geh.2,uc008gei.2,uc008gej.2,uc008gek.2,uc008gel.2,uc008gem.2,uc012bgz.1,uc012bha.1_5end | |association_with_transcript=12bp_to_ENSMUST00000071857,ENSMUST00000080824,ENSMUST00000163953,ENSMUST00000164304,ENSMUST00000169854,NM_001164480,NM_001164481,NM_001164482,NM_001164568,NM_011379,uc008geh.2,uc008gei.2,uc008gej.2,uc008gek.2,uc008gel.2,uc008gem.2,uc012bgz.1,uc012bha.1_5end | ||
|cluster_id=chr19:5663674..5663694,- | |cluster_id=chr19:5663674..5663694,- | ||
Latest revision as of 00:17, 26 September 2015
| Short description: | p2@Sipa1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Sipa1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3211 |
| Association with transcript: | 12bp_to_ENSMUST00000071857, ENSMUST00000080824, ENSMUST00000163953, ENSMUST00000164304, ENSMUST00000169854, NM_001164480, NM_001164481, NM_001164482, NM_001164568, NM_011379, uc008geh.2, uc008gei.2, uc008gej.2, uc008gek.2, uc008gel.2, uc008gem.2, uc012bgz.1, uc012bha.1_5end |
| EntrezGene: | Sipa1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic lineage restricted progenitor cell | 1.52e-08 | 25 |
| motile cell | 7.17e-08 | 54 |
| myeloid lineage restricted progenitor cell | 2.24e-07 | 13 |
| connective tissue cell | 6.32e-07 | 46 |
| mesenchymal cell | 6.32e-07 | 46 |
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 2.07e-13 | 45 |
| blood island | 2.07e-13 | 45 |
| hemolymphoid system | 5.67e-13 | 48 |
| immune system | 5.67e-13 | 48 |
| mesoderm | 1.70e-11 | 120 |
| mesoderm-derived structure | 1.70e-11 | 120 |
| presumptive mesoderm | 1.70e-11 | 120 |
| lateral plate mesoderm | 1.95e-11 | 87 |
| hemopoietic organ | 1.02e-07 | 29 |
| immune organ | 1.02e-07 | 29 |
| musculoskeletal system | 1.11e-07 | 32 |
| connective tissue | 6.32e-07 | 46 |
| bone marrow | 7.72e-07 | 16 |
| bone element | 7.73e-07 | 22 |
| skeletal element | 7.73e-07 | 22 |
| skeletal system | 7.73e-07 | 22 |
