FFCP PHASE1:Mm9::chr5:123582392..123582412,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:123582392..123582412,-
|short_description=p1@Rhof
|description=CAGE_peak_1_at_Rhof_5end
|association_with_transcript=25bp_to_ENSMUST00000162208_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=23912 | |EntrezGene=23912 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1635 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENSMUST00000162208_5end | |||
|cluster_id=chr5:123582392..123582412,- | |||
|description=CAGE_peak_1_at_Rhof_5end | |||
|id=chr5:123582392..123582412,- | |||
|ontology_enrichment_celltype=CL:0000838!4.99e-08!12;CL:0000084!1.80e-07!11;CL:0000827!1.80e-07!11;CL:0000791!3.17e-07!9;CL:0000789!3.17e-07!9;CL:0002420!3.17e-07!9;CL:0002419!3.17e-07!9;CL:0000790!3.17e-07!9;CL:0000542!4.03e-07!13;CL:0000051!4.03e-07!13;CL:0000624!9.92e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.94e-08,12;CL:0000084,1.45e-07,11;CL:0000827,1.45e-07,11;CL:0000791,2.57e-07,9;CL:0000789,2.57e-07,9;CL:0002420,2.57e-07,9;CL:0002419,2.57e-07,9;CL:0000790,2.57e-07,9;CL:0000542,3.28e-07,13;CL:0000051,3.28e-07,13;CL:0000624,8.21e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!4.05e-10!99 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@Rhof | |||
}} | }} |
Latest revision as of 20:45, 1 October 2015
Short description: | p1@Rhof |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rhof_5end |
Coexpression cluster: | MCL_coexpression_mm9:1635 |
Association with transcript: | 25bp_to_ENSMUST00000162208_5end |
EntrezGene: | Rhof |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.94e-08 | 12 |
T cell | 1.45e-07 | 11 |
pro-T cell | 1.45e-07 | 11 |
mature alpha-beta T cell | 2.57e-07 | 9 |
alpha-beta T cell | 2.57e-07 | 9 |
immature T cell | 2.57e-07 | 9 |
mature T cell | 2.57e-07 | 9 |
immature alpha-beta T cell | 2.57e-07 | 9 |
lymphocyte | 3.28e-07 | 13 |
common lymphoid progenitor | 3.28e-07 | 13 |
CD4-positive, alpha-beta T cell | 8.21e-07 | 8 |