FFCP PHASE1:Mm9::chr5:65522238..65522249,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:65522238..65522249,+
|short_description=p9@Klhl5
|description=CAGE_peak_9_at_Klhl5_5end
|association_with_transcript=-178bp_to_ENSMUST00000031089_5end
|En...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71778 | |EntrezGene=71778 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=295 | |||
|TSSclassifier=NA | |||
|UniProt=E9QA66 | |UniProt=E9QA66 | ||
|association_with_transcript=-178bp_to_ENSMUST00000031089_5end | |||
|cluster_id=chr5:65522238..65522249,+ | |||
|description=CAGE_peak_9_at_Klhl5_5end | |||
|id=chr5:65522238..65522249,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.00e-16!23;CL:0000337!5.00e-16!23;CL:0000540!1.42e-10!33;CL:0000047!1.42e-10!33;CL:0000031!1.42e-10!33;CL:0000404!1.42e-10!33;CL:0000393!4.71e-08!39;CL:0000211!4.71e-08!39;CL:0002609!5.38e-08!6;CL:0002319!1.72e-07!43;CL:0000221!3.43e-07!44;CL:0000133!3.43e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.13e-24,3;CL:0000117,9.40e-09,23;CL:0000337,9.40e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.83e-17!63;UBERON:0001049!4.87e-17!52;UBERON:0005068!4.87e-17!52;UBERON:0006241!4.87e-17!52;UBERON:0007135!4.87e-17!52;UBERON:0003056!2.25e-16!49;UBERON:0002346!1.11e-15!71;UBERON:0003075!1.11e-15!71;UBERON:0007284!1.11e-15!71;UBERON:0000073!1.74e-15!75;UBERON:0001016!1.74e-15!75;UBERON:0001017!2.36e-15!73;UBERON:0005743!2.36e-15!73;UBERON:0002020!3.20e-15!34;UBERON:0000955!1.02e-14!50;UBERON:0006238!1.02e-14!50;UBERON:0002616!1.00e-13!49;UBERON:0003080!2.04e-13!40;UBERON:0004121!5.10e-13!102;UBERON:0000924!5.10e-13!102;UBERON:0006601!5.10e-13!102;UBERON:0002780!1.89e-12!39;UBERON:0001890!1.89e-12!39;UBERON:0006240!1.89e-12!39;UBERON:0002791!2.53e-10!29;UBERON:0003528!2.53e-10!29;UBERON:0001893!2.53e-10!29;UBERON:0007811!1.15e-09!86;UBERON:0000153!2.33e-09!94;UBERON:0000956!3.78e-08!21;UBERON:0001869!3.78e-08!21;UBERON:0000203!3.78e-08!21;UBERON:0001948!2.26e-07!5;UBERON:0002315!2.26e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,1.13e-24,3;UBERON:0001948,4.31e-15,5;UBERON:0002315,4.31e-15,5;UBERON:0002240,1.10e-12,6;UBERON:0005174,1.10e-12,6;UBERON:0001137,1.10e-12,6;UBERON:0002020,2.57e-11,34;UBERON:0001017,2.65e-10,73;UBERON:0001016,5.23e-10,75;UBERON:0001049,2.21e-09,52;UBERON:0005068,2.21e-09,52;UBERON:0006241,2.21e-09,52;UBERON:0007135,2.21e-09,52;UBERON:0000073,5.17e-09,54;UBERON:0002259,6.33e-09,1;UBERON:0002314,6.33e-09,1;UBERON:0004061,6.33e-09,1;UBERON:0006777,6.33e-09,1;UBERON:0005882,6.33e-09,1;UBERON:0004121,9.89e-08,95;UBERON:0000924,9.89e-08,95;UBERON:0006601,9.89e-08,95;UBERON:0002346,1.65e-07,64;UBERON:0003075,1.65e-07,64;UBERON:0007284,1.65e-07,64 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.829516898467821,1.21505344498522,0.841299845405528,0.285650984403804,0.883474163806454,0.367472397644862,0.287536413054709,0.919218786610021,0,0.383062014255563,0.153606533256243,0.131886287730194,0.731901148819277,0.52091337055676,0,0,0.15279824777681,1.76777151284201,1.13897344639282,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,1.04853447583376,0,2.26177833803156,0.695297280769106,0.511430914660661,0.83115217823824,0.973447578406546,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.544291993210623,0.512454881139399,0.468508622798644,0.258703370739016,0,0.378212160335639,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,2.26390147234426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0.486213434136588,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.280924522409647,0.384150914429216,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0,0.376437521661322,0.338458431566706,0.548783918618318,0,0.271608227691724,1.12228454331548,0.355905054372522,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.829516898467821,1.21505344498522,0.841299845405528,0.285650984403804,0.883474163806454,0.367472397644862,0.287536413054709,0.919218786610021,0,0.383062014255563,0.153606533256243,0.131886287730194,0.731901148819277,0.52091337055676,0,0,0.15279824777681,1.76777151284201,1.13897344639282,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,1.04853447583376,0,2.26177833803156,0.695297280769106,0.511430914660661,0.83115217823824,0.973447578406546,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.544291993210623,0.512454881139399,0.468508622798644,0.258703370739016,0,0.378212160335639,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,2.26390147234426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0.486213434136588,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.280924522409647,0.384150914429216,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0,0.376437521661322,0.338458431566706,0.548783918618318,0,0.271608227691724,1.12228454331548,0.355905054372522,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p9@Klhl5 | |||
}} | }} |
Latest revision as of 03:19, 26 September 2015
Short description: | p9@Klhl5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Klhl5_5end |
Coexpression cluster: | MCL_coexpression_mm9:295 |
Association with transcript: | -178bp_to_ENSMUST00000031089_5end |
EntrezGene: | Klhl5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.13e-24 | 3 |
CNS neuron (sensu Vertebrata) | 9.40e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.40e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 1.13e-24 | 3 |
regional part of spinal cord | 4.31e-15 | 5 |
gray matter of spinal cord | 4.31e-15 | 5 |
spinal cord | 1.10e-12 | 6 |
dorsal region element | 1.10e-12 | 6 |
dorsum | 1.10e-12 | 6 |
gray matter | 2.57e-11 | 34 |
central nervous system | 2.65e-10 | 73 |
nervous system | 5.23e-10 | 75 |
neural tube | 2.21e-09 | 52 |
neural rod | 2.21e-09 | 52 |
future spinal cord | 2.21e-09 | 52 |
neural keel | 2.21e-09 | 52 |
regional part of nervous system | 5.17e-09 | 54 |
corpora quadrigemina | 6.33e-09 | 1 |
midbrain tectum | 6.33e-09 | 1 |
neural tube mantle layer | 6.33e-09 | 1 |
tectal plate | 6.33e-09 | 1 |
neural tube alar plate | 6.33e-09 | 1 |
ectoderm-derived structure | 9.89e-08 | 95 |
ectoderm | 9.89e-08 | 95 |
presumptive ectoderm | 9.89e-08 | 95 |
neurectoderm | 1.65e-07 | 64 |
neural plate | 1.65e-07 | 64 |
presumptive neural plate | 1.65e-07 | 64 |