FFCP PHASE1:Mm9::chr5:73771821..73771831,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:73771821..73771831,+
|short_description=p@chr5:73771821..73771831,+
|description=CAGE_peak_at_chr5:73771821..73771831,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=235 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:73771821..73771831,+ | |||
|description=CAGE_peak_at_chr5:73771821..73771831,+ | |||
|id=chr5:73771821..73771831,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.35e-19!50;UBERON:0006238!1.35e-19!50;UBERON:0002616!1.35e-17!49;UBERON:0000073!3.95e-15!75;UBERON:0001016!3.95e-15!75;UBERON:0000033!7.92e-15!63;UBERON:0003080!1.07e-14!40;UBERON:0001049!2.40e-14!52;UBERON:0005068!2.40e-14!52;UBERON:0006241!2.40e-14!52;UBERON:0007135!2.40e-14!52;UBERON:0001017!5.27e-14!73;UBERON:0005743!5.27e-14!73;UBERON:0002780!5.74e-13!39;UBERON:0001890!5.74e-13!39;UBERON:0006240!5.74e-13!39;UBERON:0002791!8.28e-13!29;UBERON:0003528!8.28e-13!29;UBERON:0001893!8.28e-13!29;UBERON:0002021!2.58e-12!10;UBERON:0000411!2.58e-12!10;UBERON:0001950!2.58e-12!10;UBERON:0003056!1.70e-11!49;UBERON:0002020!1.25e-10!34;UBERON:0004121!4.20e-10!102;UBERON:0000924!4.20e-10!102;UBERON:0006601!4.20e-10!102;UBERON:0007811!6.47e-10!86;UBERON:0000956!7.06e-10!21;UBERON:0001869!7.06e-10!21;UBERON:0000203!7.06e-10!21;UBERON:0002346!1.16e-09!71;UBERON:0003075!1.16e-09!71;UBERON:0007284!1.16e-09!71;UBERON:0002619!1.48e-09!17;UBERON:0002298!5.66e-09!6;UBERON:0000153!9.05e-09!94;UBERON:0002950!6.41e-08!4;UBERON:0001891!6.41e-08!4;UBERON:0009616!6.41e-08!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.74e-13,47;UBERON:0006238,1.74e-13,47;UBERON:0002780,3.19e-13,39;UBERON:0001890,3.19e-13,39;UBERON:0006240,3.19e-13,39;UBERON:0003080,7.17e-13,40;UBERON:0001017,3.06e-12,73;UBERON:0001049,4.83e-12,52;UBERON:0005068,4.83e-12,52;UBERON:0006241,4.83e-12,52;UBERON:0007135,4.83e-12,52;UBERON:0001016,6.97e-12,75;UBERON:0000073,1.51e-11,54;UBERON:0000956,2.04e-11,21;UBERON:0001869,2.04e-11,21;UBERON:0000203,2.04e-11,21;UBERON:0002616,4.42e-11,46;UBERON:0002021,5.05e-11,10;UBERON:0000411,5.05e-11,10;UBERON:0001950,5.05e-11,10;UBERON:0003528,5.65e-11,29;UBERON:0002791,5.65e-11,29;UBERON:0001893,5.65e-11,29;UBERON:0003056,2.39e-10,49;UBERON:0002619,5.20e-10,17;UBERON:0007023,6.08e-10,51;UBERON:0002346,1.36e-09,64;UBERON:0003075,1.36e-09,64;UBERON:0007284,1.36e-09,64;UBERON:0002020,2.76e-09,34;UBERON:0004121,4.02e-09,95;UBERON:0000924,4.02e-09,95;UBERON:0006601,4.02e-09,95;UBERON:0001851,1.84e-08,1;UBERON:0005889,1.84e-08,1;UBERON:0010371,2.81e-08,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40456071893706,0.768032666281217,0,0,0,0.558365998002762,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,1.37250180845588,0,1.73824320192276,2.81287003063364,1.24672826735736,2.59586020908412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0.755393897389701,1.35004500046361,1.35096360967266,2.26571204492102,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40456071893706,0.768032666281217,0,0,0,0.558365998002762,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,1.37250180845588,0,1.73824320192276,2.81287003063364,1.24672826735736,2.59586020908412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0.755393897389701,1.35004500046361,1.35096360967266,2.26571204492102,2.07104124700728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:73771821..73771831,+ | |||
}} | }} |
Latest revision as of 14:28, 4 August 2015
Short description: | p@chr5:73771821..73771831, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:73771821..73771831, + |
Coexpression cluster: | MCL_coexpression_mm9:235 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 1.74e-13 | 47 |
future brain | 1.74e-13 | 47 |
regional part of forebrain | 3.19e-13 | 39 |
forebrain | 3.19e-13 | 39 |
future forebrain | 3.19e-13 | 39 |
anterior neural tube | 7.17e-13 | 40 |
central nervous system | 3.06e-12 | 73 |
neural tube | 4.83e-12 | 52 |
neural rod | 4.83e-12 | 52 |
future spinal cord | 4.83e-12 | 52 |
neural keel | 4.83e-12 | 52 |
nervous system | 6.97e-12 | 75 |
regional part of nervous system | 1.51e-11 | 54 |
cerebral cortex | 2.04e-11 | 21 |
cerebral hemisphere | 2.04e-11 | 21 |
pallium | 2.04e-11 | 21 |
regional part of brain | 4.42e-11 | 46 |
occipital lobe | 5.05e-11 | 10 |
visual cortex | 5.05e-11 | 10 |
neocortex | 5.05e-11 | 10 |
brain grey matter | 5.65e-11 | 29 |
regional part of telencephalon | 5.65e-11 | 29 |
telencephalon | 5.65e-11 | 29 |
pre-chordal neural plate | 2.39e-10 | 49 |
regional part of cerebral cortex | 5.20e-10 | 17 |
adult organism | 6.08e-10 | 51 |
neurectoderm | 1.36e-09 | 64 |
neural plate | 1.36e-09 | 64 |
presumptive neural plate | 1.36e-09 | 64 |
gray matter | 2.76e-09 | 34 |
ectoderm-derived structure | 4.02e-09 | 95 |
ectoderm | 4.02e-09 | 95 |
presumptive ectoderm | 4.02e-09 | 95 |
cortex | 1.84e-08 | 1 |
zygote cortex | 1.84e-08 | 1 |
ecto-epithelium | 2.81e-08 | 73 |