FFCP PHASE1:Mm9::chr6:18120742..18120756,+: Difference between revisions
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|id=chr6:18120742..18120756,+
|short_description=p2@Cftr
|description=CAGE_peak_2_at_Cftr_5end
|association_with_transcript=-12bp_to_ENSMUST00000167351_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12638 | |EntrezGene=12638 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1705 | |||
|TSSclassifier=NA | |||
|UniProt=E9PY75 | |UniProt=E9PY75 | ||
|association_with_transcript=-12bp_to_ENSMUST00000167351_5end | |||
|cluster_id=chr6:18120742..18120756,+ | |||
|description=CAGE_peak_2_at_Cftr_5end | |||
|id=chr6:18120742..18120756,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.06e-08!9;CL:0002251!1.06e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.17e-13,9;CL:0002251,2.17e-13,9;CL:0000239,5.94e-09,6;CL:0000677,5.94e-09,6;CL:0000584,5.94e-09,6;CL:0000066,1.08e-07,25;CL:0000075,1.63e-07,7;CL:0002076,4.29e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.54e-16!43;UBERON:0005409!4.65e-16!59;UBERON:0000344!1.07e-13!15;UBERON:0001242!7.20e-12!13;UBERON:0000060!7.20e-12!13;UBERON:0001262!7.20e-12!13;UBERON:0004786!7.20e-12!13;UBERON:0001007!2.92e-11!128;UBERON:0001555!2.92e-11!128;UBERON:0007026!2.92e-11!128;UBERON:0004119!9.86e-11!130;UBERON:0000925!9.86e-11!130;UBERON:0006595!9.86e-11!130;UBERON:0004921!3.91e-10!126;UBERON:0004185!3.91e-10!126;UBERON:0002048!9.89e-09!14;UBERON:0000117!9.89e-09!14;UBERON:0000171!9.89e-09!14;UBERON:0000170!9.89e-09!14;UBERON:0005597!9.89e-09!14;UBERON:0000118!9.89e-09!14;UBERON:0003350!1.06e-08!9;UBERON:0004808!1.06e-08!9;UBERON:0001277!1.06e-08!9;UBERON:0000485!2.08e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.93e-37,31;UBERON:0005409,1.23e-33,47;UBERON:0001007,9.93e-24,116;UBERON:0001555,9.93e-24,116;UBERON:0007026,9.93e-24,116;UBERON:0004119,4.49e-23,118;UBERON:0000925,4.49e-23,118;UBERON:0006595,4.49e-23,118;UBERON:0000344,1.13e-21,15;UBERON:0004921,1.57e-21,114;UBERON:0001242,1.22e-18,13;UBERON:0001262,1.22e-18,13;UBERON:0004786,1.22e-18,13;UBERON:0003350,2.17e-13,9;UBERON:0004808,2.17e-13,9;UBERON:0001277,2.17e-13,9;UBERON:0002048,8.34e-12,14;UBERON:0000117,8.34e-12,14;UBERON:0000171,8.34e-12,14;UBERON:0000170,8.34e-12,14;UBERON:0005597,8.34e-12,14;UBERON:0000118,8.34e-12,14;UBERON:0004923,9.42e-12,24;UBERON:0000485,1.63e-10,11;UBERON:0005153,3.55e-09,17;UBERON:0005178,3.55e-09,17;UBERON:0005181,3.55e-09,17;UBERON:0002224,3.55e-09,17;UBERON:0000915,3.55e-09,17;UBERON:0008947,3.55e-09,17;UBERON:0003258,3.55e-09,17;UBERON:0005157,2.35e-07,20;UBERON:0002108,4.28e-07,4;UBERON:0011216,6.52e-07,194 | |||
|phase1_expression=0.160148847104794,9.77131141390211,10.9199817453489,4.53696316960245,9.01612313903425,25.1818907867835,28.0335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,40.1580981211451,34.4113921600755,12.0588712464154,21.1073378117947,20.9007095705312,29.453630015738,18.3981994724749,38.581108854023,0,0,0,43.0388913429399,30.0884708098871,38.7921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0.461230994512117,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0.209446706813455,14.0501380364725,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0.407357455401265,0.746441823660558,4.80173241023982,0,0,0,0,0.150704817835715,0.340182495756639,0.12811372028485,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.102904612379284,3.30418782983798,8.46241813323342,0.639864751605702,1.85789337488351,6.31450560478257,3.63030344322017,2.89091456998331,4.37518940058886,12.3377556001573,3.45867804920423,5.27803938480566,5.96869416123452,6.62877896205008,14.3811105384675,14.4812493416045,17.5244320463843,0.189667900953082,0.685491075658373,0,1.22190796707189,0.775809948670503,0.701358198903186,0.316182685621286,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,0,2.21703828199926,0.757965647081939,1.30371981153621,1.52770577197669,2.58159273117352,3.68513766371995,6.66522194480839,2.34160377429359,2.20689201748667,2.21464689648775,1.59454768657487,1.63863314715738,1.38147985492716,1.3018415272336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82596289708113,0,0.162886959353576,6.76377504187395,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,14.2825609948627,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,1.21991680276109,2.16010681643603,1.25452977608681,0.87345025498471,1.21377911746339,2.47960367176008,1.57053565190418,32.7925882428236,11.8054469486516,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0,0,0,0.563047426353546,10.4396425832341,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0.419226325255965,0,1.11123363900808,0.412070114477788,0.962757628775446,0,0,0.943131706930381,0.842773567228942,1.02440243847791,0.861532034334199,0.476293691283074,0.927074607558844,0.77163688185482,1.23625770240992,0.735994600671987,0.342869252385415,0.70990322463735,0.953744759789284,1.0174249164263,0.564656282491984,0.423073039458382,0.914639864363863,0.526139422875686,0.950628796921032,0,0.474540072496697,0.689531376628944,0.409231043169689,0.929621047115796,0.771626443924566,0,0.701794825336225,0.429742108096597,0,0.441182838239031,0 | |phase1_expression=0.160148847104794,9.77131141390211,10.9199817453489,4.53696316960245,9.01612313903425,25.1818907867835,28.0335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,40.1580981211451,34.4113921600755,12.0588712464154,21.1073378117947,20.9007095705312,29.453630015738,18.3981994724749,38.581108854023,0,0,0,43.0388913429399,30.0884708098871,38.7921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0.461230994512117,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0.209446706813455,14.0501380364725,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0.407357455401265,0.746441823660558,4.80173241023982,0,0,0,0,0.150704817835715,0.340182495756639,0.12811372028485,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.102904612379284,3.30418782983798,8.46241813323342,0.639864751605702,1.85789337488351,6.31450560478257,3.63030344322017,2.89091456998331,4.37518940058886,12.3377556001573,3.45867804920423,5.27803938480566,5.96869416123452,6.62877896205008,14.3811105384675,14.4812493416045,17.5244320463843,0.189667900953082,0.685491075658373,0,1.22190796707189,0.775809948670503,0.701358198903186,0.316182685621286,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,0,2.21703828199926,0.757965647081939,1.30371981153621,1.52770577197669,2.58159273117352,3.68513766371995,6.66522194480839,2.34160377429359,2.20689201748667,2.21464689648775,1.59454768657487,1.63863314715738,1.38147985492716,1.3018415272336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82596289708113,0,0.162886959353576,6.76377504187395,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,14.2825609948627,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,1.21991680276109,2.16010681643603,1.25452977608681,0.87345025498471,1.21377911746339,2.47960367176008,1.57053565190418,32.7925882428236,11.8054469486516,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0,0,0,0.563047426353546,10.4396425832341,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0.419226325255965,0,1.11123363900808,0.412070114477788,0.962757628775446,0,0,0.943131706930381,0.842773567228942,1.02440243847791,0.861532034334199,0.476293691283074,0.927074607558844,0.77163688185482,1.23625770240992,0.735994600671987,0.342869252385415,0.70990322463735,0.953744759789284,1.0174249164263,0.564656282491984,0.423073039458382,0.914639864363863,0.526139422875686,0.950628796921032,0,0.474540072496697,0.689531376628944,0.409231043169689,0.929621047115796,0.771626443924566,0,0.701794825336225,0.429742108096597,0,0.441182838239031,0 | ||
|short_description=p2@Cftr | |||
}} | }} |
Latest revision as of 23:44, 26 September 2015
Short description: | p2@Cftr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cftr_5end |
Coexpression cluster: | MCL_coexpression_mm9:1705 |
Association with transcript: | -12bp_to_ENSMUST00000167351_5end |
EntrezGene: | Cftr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.17e-13 | 9 |
epithelial cell of alimentary canal | 2.17e-13 | 9 |
brush border epithelial cell | 5.94e-09 | 6 |
gut absorptive cell | 5.94e-09 | 6 |
enterocyte | 5.94e-09 | 6 |
epithelial cell | 1.08e-07 | 25 |
columnar/cuboidal epithelial cell | 1.63e-07 | 7 |
endo-epithelial cell | 4.29e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.93e-37 | 31 |
gastrointestinal system | 1.23e-33 | 47 |
digestive system | 9.93e-24 | 116 |
digestive tract | 9.93e-24 | 116 |
primitive gut | 9.93e-24 | 116 |
endoderm-derived structure | 4.49e-23 | 118 |
endoderm | 4.49e-23 | 118 |
presumptive endoderm | 4.49e-23 | 118 |
mucosa | 1.13e-21 | 15 |
subdivision of digestive tract | 1.57e-21 | 114 |
intestinal mucosa | 1.22e-18 | 13 |
wall of intestine | 1.22e-18 | 13 |
gastrointestinal system mucosa | 1.22e-18 | 13 |
epithelium of mucosa | 2.17e-13 | 9 |
gastrointestinal system epithelium | 2.17e-13 | 9 |
intestinal epithelium | 2.17e-13 | 9 |
lung | 8.34e-12 | 14 |
respiratory tube | 8.34e-12 | 14 |
respiration organ | 8.34e-12 | 14 |
pair of lungs | 8.34e-12 | 14 |
lung primordium | 8.34e-12 | 14 |
lung bud | 8.34e-12 | 14 |
organ component layer | 9.42e-12 | 24 |
simple columnar epithelium | 1.63e-10 | 11 |
epithelial bud | 3.55e-09 | 17 |
thoracic cavity element | 3.55e-09 | 17 |
thoracic segment organ | 3.55e-09 | 17 |
thoracic cavity | 3.55e-09 | 17 |
thoracic segment of trunk | 3.55e-09 | 17 |
respiratory primordium | 3.55e-09 | 17 |
endoderm of foregut | 3.55e-09 | 17 |
epithelial fold | 2.35e-07 | 20 |
small intestine | 4.28e-07 | 4 |
organ system subdivision | 6.52e-07 | 194 |