FFCP PHASE1:Mm9::chr6:97567621..97567636,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:97567621..97567636,-
|short_description=p19@Frmd4b
|description=CAGE_peak_19_at_Frmd4b_5end
|association_with_transcript=14bp_to_NM_145148,uc009daw.2,uc009...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=232288 | |EntrezGene=232288 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt=Q920B0,D3Z6Q1 | |UniProt=Q920B0,D3Z6Q1 | ||
|association_with_transcript=14bp_to_NM_145148,uc009daw.2,uc009dax.2_5end | |||
|cluster_id=chr6:97567621..97567636,- | |||
|description=CAGE_peak_19_at_Frmd4b_5end | |||
|id=chr6:97567621..97567636,- | |||
|ontology_enrichment_celltype=CL:0002609!1.04e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,3.91e-58,6;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0002608,1.13e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.89e-07!14;UBERON:0000117!1.89e-07!14;UBERON:0000171!1.89e-07!14;UBERON:0000170!1.89e-07!14;UBERON:0005597!1.89e-07!14;UBERON:0000118!1.89e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.25e-17,21;UBERON:0001869,2.25e-17,21;UBERON:0000203,2.25e-17,21;UBERON:0003528,7.80e-13,29;UBERON:0002791,7.80e-13,29;UBERON:0001893,7.80e-13,29;UBERON:0002020,4.50e-11,34;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,3.21437798156281,2.70011876663381,2.10324961351382,0,0,0.979926393719632,0.766763768145891,4.5960939330501,0,0.127687338085188,0,0.263772575460388,0.182975287204819,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593768556259299,0,0,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0,0,0,0,0,0.376963056338593,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0.180062129805349,0.30140963567143,0.408218994907967,0.12811372028485,0.281105173679186,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.280543279561274,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0,0.630540576424764,0.44292937929755,0.797273843287435,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0,0.646270193198397,0.238968797952552,0,0,0.404810701674894,0.584511715822624,0,0,0,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.361877549568935,0.238744688006273,0.164140899745061,0,0,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.897099276263873,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0,0.405450430580328,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,0.579568782096571,0.375364950902364,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0,0,0.44449345560323,0,0,0.252697211763798,0,0.188626341386076,0.468207537349412,0.320125762024346,0.229741875822453,0.476293691283074,0.347652977834566,0,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0,0,0.376437521661322,0.0846146078916765,0.182927972872773,0,0.814824683075171,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0,0.499621155875892,0.233931608445408,0,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,3.21437798156281,2.70011876663381,2.10324961351382,0,0,0.979926393719632,0.766763768145891,4.5960939330501,0,0.127687338085188,0,0.263772575460388,0.182975287204819,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593768556259299,0,0,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,0,0,0,0,0,0.376963056338593,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0.180062129805349,0.30140963567143,0.408218994907967,0.12811372028485,0.281105173679186,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.280543279561274,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.339490171550376,0.234690248288502,0.167506257441816,0.476087281772027,0,0.630540576424764,0.44292937929755,0.797273843287435,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0,0.646270193198397,0.238968797952552,0,0,0.404810701674894,0.584511715822624,0,0,0,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.361877549568935,0.238744688006273,0.164140899745061,0,0,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.897099276263873,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0,0.405450430580328,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,0.579568782096571,0.375364950902364,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0,0,0.44449345560323,0,0,0.252697211763798,0,0.188626341386076,0.468207537349412,0.320125762024346,0.229741875822453,0.476293691283074,0.347652977834566,0,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0,0,0.376437521661322,0.0846146078916765,0.182927972872773,0,0.814824683075171,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0,0.499621155875892,0.233931608445408,0,0,0,0 | ||
|short_description=p19@Frmd4b | |||
}} | }} |
Latest revision as of 23:26, 1 October 2015
Short description: | p19@Frmd4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_Frmd4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | 14bp_to_NM_145148, uc009daw.2, uc009dax.2_5end |
EntrezGene: | Frmd4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 3.91e-58 | 6 |
CNS neuron (sensu Vertebrata) | 6.04e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-16 | 23 |
neuron | 2.20e-11 | 33 |
neuronal stem cell | 2.20e-11 | 33 |
neuroblast | 2.20e-11 | 33 |
electrically signaling cell | 2.20e-11 | 33 |
electrically responsive cell | 9.26e-10 | 39 |
electrically active cell | 9.26e-10 | 39 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
hippocampal neuron | 1.13e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 2.25e-17 | 21 |
cerebral hemisphere | 2.25e-17 | 21 |
pallium | 2.25e-17 | 21 |
brain grey matter | 7.80e-13 | 29 |
regional part of telencephalon | 7.80e-13 | 29 |
telencephalon | 7.80e-13 | 29 |
gray matter | 4.50e-11 | 34 |
regional part of forebrain | 9.26e-10 | 39 |
forebrain | 9.26e-10 | 39 |
future forebrain | 9.26e-10 | 39 |
anterior neural tube | 1.55e-09 | 40 |
regional part of brain | 2.15e-08 | 46 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
pre-chordal neural plate | 6.29e-08 | 49 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |