FFCP PHASE1:Mm9::chr6:99255980..99255988,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:99255980..99255988,+
|short_description=p@chr6:99255980..99255988,+
|description=CAGE_peak_at_chr6:99255980..99255988,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=553 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:99255980..99255988,+ | |||
|description=CAGE_peak_at_chr6:99255980..99255988,+ | |||
|id=chr6:99255980..99255988,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.45e-27!12;CL:0000084!1.92e-25!11;CL:0000827!1.92e-25!11;CL:0000542!3.12e-25!13;CL:0000051!3.12e-25!13;CL:0002031!3.14e-25!25;CL:0000791!8.98e-22!9;CL:0000789!8.98e-22!9;CL:0002420!8.98e-22!9;CL:0002419!8.98e-22!9;CL:0000790!8.98e-22!9;CL:0000624!1.18e-19!8;CL:0000988!8.70e-19!32;CL:0002032!8.70e-19!32;CL:0000037!8.70e-19!32;CL:0000566!8.70e-19!32;CL:0000837!8.70e-19!32;CL:0000738!1.21e-18!17;CL:0002087!1.21e-18!17;CL:0000893!7.27e-15!6;CL:0002489!7.27e-15!6;CL:0000898!7.27e-15!6;CL:0000809!7.27e-15!6;CL:0000810!7.27e-15!6;CL:0000895!7.27e-15!6;CL:0000808!7.27e-15!6;CL:0000894!7.27e-15!6;CL:0000806!7.27e-15!6;CL:0000807!7.27e-15!6;CL:0000805!7.27e-15!6;CL:0002425!7.27e-15!6;CL:0002436!7.27e-15!6;CL:0002427!7.27e-15!6;CL:0002428!7.27e-15!6;CL:0002429!7.27e-15!6;CL:0002433!7.27e-15!6;CL:0002431!7.27e-15!6;CL:0002432!7.27e-15!6;CL:0002320!8.28e-12!46;CL:0000134!8.28e-12!46;CL:0000553!1.51e-10!6;CL:0000556!1.51e-10!6;CL:0000219!1.84e-09!54;CL:0000063!4.94e-07!66;CL:0000050!6.97e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,5.15e-19,1;CL:0000792,5.15e-19,1;CL:0000553,1.61e-12,6;CL:0000556,1.61e-12,6;CL:0002031,8.53e-12,25;CL:0000624,8.88e-10,8;CL:0000988,2.33e-09,32;CL:0002032,2.33e-09,32;CL:0000037,2.33e-09,32;CL:0000837,2.33e-09,32;CL:0000791,8.40e-09,9;CL:0000789,8.40e-09,9;CL:0002420,8.40e-09,9;CL:0002419,8.40e-09,9;CL:0000790,8.40e-09,9;CL:0000050,1.10e-08,9;CL:0000084,2.24e-07,11;CL:0000827,2.24e-07,11;CL:0000838,7.73e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.29e-26!48;UBERON:0002390!1.16e-25!45;UBERON:0003061!1.16e-25!45;UBERON:0004177!1.93e-25!29;UBERON:0002370!9.21e-20!23;UBERON:0000974!9.21e-20!23;UBERON:0004807!9.21e-20!23;UBERON:0005058!9.21e-20!23;UBERON:0003351!9.21e-20!23;UBERON:0009113!9.21e-20!23;UBERON:0003295!9.21e-20!23;UBERON:0009722!9.21e-20!23;UBERON:0005562!9.21e-20!23;UBERON:0007690!9.21e-20!23;UBERON:0006562!8.60e-19!24;UBERON:0003408!8.60e-19!24;UBERON:0001557!8.60e-19!24;UBERON:0001042!8.60e-19!24;UBERON:0008814!8.60e-19!24;UBERON:0009145!8.60e-19!24;UBERON:0000072!2.58e-16!27;UBERON:0002405!4.30e-16!70;UBERON:0000065!5.51e-16!41;UBERON:0001004!1.69e-15!42;UBERON:0003081!1.00e-12!88;UBERON:0005057!1.69e-12!51;UBERON:0002384!8.28e-12!46;UBERON:0000063!8.53e-12!35;UBERON:0001041!4.08e-09!92;UBERON:0000077!2.28e-08!97;UBERON:0005911!9.64e-08!69;UBERON:0002106!7.70e-07!6;UBERON:0004457!7.70e-07!6;UBERON:0000042!7.70e-07!6;UBERON:0004854!7.70e-07!6;UBERON:0009034!7.70e-07!6;UBERON:0002095!7.70e-07!6;UBERON:0004782!7.70e-07!6;UBERON:0003281!7.70e-07!6;UBERON:0009664!7.70e-07!6;UBERON:0002296!7.70e-07!6;UBERON:0005602!7.70e-07!6;UBERON:0001179!7.70e-07!6;UBERON:0006293!7.70e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,7.74e-19,1;UBERON:0001097,7.74e-19,1;UBERON:0003968,7.74e-19,1;UBERON:0001467,7.74e-19,1;UBERON:0002465,3.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,4.00282302668886,0.563154888606667,0.936258105287974,0.171217968225505,0.398860794976682,1.36960583944965,0.699363219351979,0.333109761815663,0.202475267389826,0,1.10411757875383,0.822686601634433,1.69755860719212,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0.376736914009382,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.360586348559907,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0.194915761479505,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,4.00282302668886,0.563154888606667,0.936258105287974,0.171217968225505,0.398860794976682,1.36960583944965,0.699363219351979,0.333109761815663,0.202475267389826,0,1.10411757875383,0.822686601634433,1.69755860719212,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0.376736914009382,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.360586348559907,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0.194915761479505,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:99255980..99255988,+ | |||
}} | }} |
Latest revision as of 09:44, 6 August 2015
Short description: | p@chr6:99255980..99255988, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:99255980..99255988, + |
Coexpression cluster: | MCL_coexpression_mm9:553 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 5.15e-19 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.15e-19 | 1 |
megakaryocyte progenitor cell | 1.61e-12 | 6 |
megakaryocyte | 1.61e-12 | 6 |
hematopoietic lineage restricted progenitor cell | 8.53e-12 | 25 |
CD4-positive, alpha-beta T cell | 8.88e-10 | 8 |
hematopoietic cell | 2.33e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.33e-09 | 32 |
hematopoietic stem cell | 2.33e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.33e-09 | 32 |
mature alpha-beta T cell | 8.40e-09 | 9 |
alpha-beta T cell | 8.40e-09 | 9 |
immature T cell | 8.40e-09 | 9 |
mature T cell | 8.40e-09 | 9 |
immature alpha-beta T cell | 8.40e-09 | 9 |
megakaryocyte-erythroid progenitor cell | 1.10e-08 | 9 |
T cell | 2.24e-07 | 11 |
pro-T cell | 2.24e-07 | 11 |
lymphoid lineage restricted progenitor cell | 7.73e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lymph node | 7.74e-19 | 1 |
axillary lymph node | 7.74e-19 | 1 |
peripheral lymph node | 7.74e-19 | 1 |
shoulder | 7.74e-19 | 1 |
lymphoid system | 3.64e-07 | 3 |