FFCP PHASE1:Mm9::chr7:109398600..109398637,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:109398600..109398637,-
|short_description=p1@Rhog
|description=CAGE_peak_1_at_Rhog_5end
|association_with_transcript=0bp_to_ENSMUST00000098230,ENSMUST00000...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56212 | |EntrezGene=56212 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=116 | |||
|TSSclassifier=NA | |||
|UniProt=P84096,Q3UDZ1 | |UniProt=P84096,Q3UDZ1 | ||
|association_with_transcript=0bp_to_ENSMUST00000098230,ENSMUST00000106923,NM_019566,uc009irk.1_5end | |||
|cluster_id=chr7:109398600..109398637,- | |||
|description=CAGE_peak_1_at_Rhog_5end | |||
|id=chr7:109398600..109398637,- | |||
|ontology_enrichment_celltype=CL:0000988!7.02e-14!32;CL:0002032!7.02e-14!32;CL:0000037!7.02e-14!32;CL:0000566!7.02e-14!32;CL:0000837!7.02e-14!32;CL:0000219!9.93e-14!54;CL:0002320!5.33e-12!46;CL:0000134!5.33e-12!46;CL:0002031!1.02e-11!25;CL:0000049!1.81e-09!19;CL:0000763!2.32e-08!16;CL:0000063!4.54e-08!66;CL:0000738!5.09e-08!17;CL:0002087!5.09e-08!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.02e-14,32;CL:0002032,7.02e-14,32;CL:0000037,7.02e-14,32;CL:0000837,7.02e-14,32;CL:0000219,9.93e-14,54;CL:0002320,5.33e-12,46;CL:0000134,5.33e-12,46;CL:0002031,1.02e-11,25;CL:0000049,1.81e-09,19;CL:0000763,2.32e-08,16;CL:0000738,5.09e-08,17;CL:0002087,5.09e-08,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.17e-17!48;UBERON:0002390!5.60e-16!45;UBERON:0003061!5.60e-16!45;UBERON:0002405!2.75e-12!70;UBERON:0002384!5.33e-12!46;UBERON:0002204!1.59e-09!32;UBERON:0002371!2.56e-09!16;UBERON:0003081!3.62e-09!88;UBERON:0004177!4.69e-08!29;UBERON:0001474!1.63e-07!22;UBERON:0004765!1.63e-07!22;UBERON:0001434!1.63e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.17e-17,48;UBERON:0002405,3.17e-17,48;UBERON:0002390,5.60e-16,45;UBERON:0003061,5.60e-16,45;UBERON:0002384,5.33e-12,46;UBERON:0002204,1.59e-09,32;UBERON:0002371,2.56e-09,16;UBERON:0003081,9.90e-09,87;UBERON:0004177,4.69e-08,29;UBERON:0005057,4.69e-08,29;UBERON:0004119,1.02e-07,118;UBERON:0000925,1.02e-07,118;UBERON:0006595,1.02e-07,118;UBERON:0001007,1.34e-07,116;UBERON:0001555,1.34e-07,116;UBERON:0007026,1.34e-07,116;UBERON:0001474,1.63e-07,22;UBERON:0004765,1.63e-07,22;UBERON:0001434,1.63e-07,22;UBERON:0000077,3.09e-07,35;UBERON:0004921,3.90e-07,114 | |||
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|phase1_expression=28.3463459375485,144.126843355056,151.514746716716,60.492842261366,62.1110705133471,71.8523283782888,82.4652621302206,214.6029635599,390.125549082269,428.104018642926,97.2518059520868,122.928897011813,182.842379566528,213.742883914449,138.573660915316,132.216349605556,116.8268336474,146.058982560864,139.034035676219,136.229078227168,51.5362338315483,134.042784121195,90.1139272529327,122.55419585975,126.863332430145,152.745702454595,151.628222647994,159.87965465293,110.02355986524,87.454455026696,116.63024860469,130.181288059224,140.849836356867,142.633512913895,28.8851619751275,38.4002030778117,31.8504195769296,1204.11550163008,960.261138419751,652.834108735326,1244.69782867363,1186.45000737282,973.933768180494,82.7142094099543,80.8987911131726,62.9565359914568,233.152620615716,107.922452408321,94.0256862103539,96.6316598399189,105.129802640647,116.439577135627,158.554562724561,179.164449076802,209.050343066613,146.380619104454,139.541785250175,100.556057994101,9.91350658212029,8.99284664762456,16.4796164911607,143.331237065243,154.737294523338,783.362703893458,1045.23174523329,895.204944832086,335.252523670095,277.789834747484,18.456750990909,17.2807601064564,17.6672967535161,50.2745732550694,52.3458442055324,13.35149711443,16.7729574281914,11.9498442259303,94.6996576594743,99.8514983826168,97.3865420844584,11.6059933202571,11.4359554503012,11.4600941522487,127.028264545628,70.34532625396,77.1631151272891,23.5702868378934,20.9286370774681,15.8439528951505,85.8735032398307,128.169365941108,48.4073696131802,66.2526385275668,40.798280022465,31.3027851149934,36.3874793770695,36.7382047419815,66.8515439827139,94.418398708244,78.4553733900664,71.0212544765784,32.2531431288598,34.6481489018658,15.2883143823987,21.3320010945999,59.3185452370727,73.7277208532537,62.6850311818331,58.9188819350349,296.224938892364,68.1349418307546,68.7001893993898,98.0378840165095,74.950036608219,64.5092901565225,71.2587565242371,52.9056349497934,140.15954670539,74.9024668845142,288.383039935659,70.0450460272282,102.028781528702,97.9448011333149,54.0536107532554,51.8222010710438,45.2404886717063,121.086644168872,113.824368280624,203.966928537759,143.335216138417,90.9229181187274,86.4676139327204,7.91622418311046,42.5869584471077,32.9872939956126,107.218630992733,103.347684574162,49.6976095589543,113.210343255185,42.9628689337247,45.4554408714784,30.7084245391981,25.9789378009824,32.9513697543789,29.5381442958002,25.10546818684,19.2170580427275,22.113606996096,42.9447595426766,53.6764302402777,49.3566869238008,53.8410439941684,60.9364136148658,46.7119378699004,75.9189723018323,70.9948370607405,39.2097505632432,216.98387487979,193.782974057381,185.274601605926,50.745814271198,50.6576289559168,42.8547706277215,55.161523391354,49.7813506320932,45.0459969631144,41.1585082208222,45.3382048365356,42.3858192792825,36.8614063806196,41.0418660197738,48.8034233466052,40.4973965168171,62.1326826273673,59.0508242545636,51.5210373982112,13.7892180588241,159.261853398191,110.011435732034,49.269585873639,49.234174434413,56.4439480590769,70.5892336181699,75.6085349072559,95.1128130562796,97.7529866781694,110.842396529259,85.7053062008919,111.216667871003,85.7841983324129,97.9713155433101,92.2909472964944,112.913101935226,51.9690048611444,38.9587427999175,56.3538678365402,40.5266142412175,47.5183593560683,32.9638353484497,43.3170279301162,37.7881978827781,39.2496819603437,42.2018300612558,53.9543781298611,86.0920745495045,87.8618708156017,98.4896052245659,110.964486399511,111.906202125121,97.0124495287209,124.860123653652,70.5288236471404,66.7184234047038,35.9420516318386,97.1287873414794,71.7686648163489,58.850878561677,49.1548913050039,58.8581096063308,148.356811703784,48.5098014132441,62.0896560244119,56.864603734688,62.1929157964531,92.9659728802077,150.443581039961,121.958529911124,115.704195773944,105.860121652114,96.6295898064372,118.473176539479,115.69893785015,134.523624480806,437.29472342389,530.85194740706,94.418740419655,70.6398070540115,151.2386557685,177.69291687378,58.5247754994731,55.7960749121664,45.7486918153572,48.8048430370798,59.4568577742525,80.53248491001,84.8862948253922,58.0306888117106,61.126415952909,64.8808004563112,56.5261522463529,40.8078071855695,71.5378029449674,60.1861740395323,44.3052529441727,74.566495583586,46.460798418987,54.1400818625609,42.9299450889946,48.094295337754,72.3489637557893,59.0275484052341,58.9216508423544,60.7101328227434,42.7796854061666,40.7687417737203,40.0590712584995,41.2542172992747,36.4270378156553,31.6907525495106,51.3553974617535,50.5835402674558,40.4335732704384,49.9432689285798,41.3018041711324,56.6304805353155,75.329618288451,78.5896982904773,44.3262080090473,91.8416428884044,72.9819208665493,81.7843262025793,137.516940291613,157.739404655004,92.9823868849224,185.981577916541,198.551963487105,133.738690440168,175.564411946487,148.245975662692,157.061667651458,148.477034411033,114.565461815858,115.599899619341,131.84277500942,128.88053343204,49.1902470018665,55.09957559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| ||
|short_description=p1@Rhog | |||
}} | }} |
Latest revision as of 15:59, 25 September 2015
Short description: | p1@Rhog |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rhog_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | 0bp_to_ENSMUST00000098230, ENSMUST00000106923, NM_019566, uc009irk.1_5end |
EntrezGene: | Rhog |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.02e-14 | 32 |
hematopoietic oligopotent progenitor cell | 7.02e-14 | 32 |
hematopoietic stem cell | 7.02e-14 | 32 |
hematopoietic multipotent progenitor cell | 7.02e-14 | 32 |
motile cell | 9.93e-14 | 54 |
connective tissue cell | 5.33e-12 | 46 |
mesenchymal cell | 5.33e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 1.02e-11 | 25 |
common myeloid progenitor | 1.81e-09 | 19 |
myeloid cell | 2.32e-08 | 16 |
leukocyte | 5.09e-08 | 17 |
nongranular leukocyte | 5.09e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.17e-17 | 48 |
immune system | 3.17e-17 | 48 |
hematopoietic system | 5.60e-16 | 45 |
blood island | 5.60e-16 | 45 |
connective tissue | 5.33e-12 | 46 |
musculoskeletal system | 1.59e-09 | 32 |
bone marrow | 2.56e-09 | 16 |
lateral plate mesoderm | 9.90e-09 | 87 |
hemopoietic organ | 4.69e-08 | 29 |
immune organ | 4.69e-08 | 29 |
endoderm-derived structure | 1.02e-07 | 118 |
endoderm | 1.02e-07 | 118 |
presumptive endoderm | 1.02e-07 | 118 |
digestive system | 1.34e-07 | 116 |
digestive tract | 1.34e-07 | 116 |
primitive gut | 1.34e-07 | 116 |
bone element | 1.63e-07 | 22 |
skeletal element | 1.63e-07 | 22 |
skeletal system | 1.63e-07 | 22 |
mixed endoderm/mesoderm-derived structure | 3.09e-07 | 35 |
subdivision of digestive tract | 3.90e-07 | 114 |