FFCP PHASE1:Mm9::chr8:112229478..112229536,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:112229478..112229536,+
|short_description=p1@Zfp821
|description=CAGE_peak_1_at_Zfp821_5end
|association_with_transcript=29bp_to_ENSMUST00000034163,NM_0011...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=75871 | |EntrezGene=75871 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PD05 | |UniProt=Q6PD05 | ||
|association_with_transcript=29bp_to_ENSMUST00000034163,NM_001167946,NR_030772,NR_030773,uc009njc.2,uc009njd.2,uc009nje.2_5end | |||
|cluster_id=chr8:112229478..112229536,+ | |||
|description=CAGE_peak_1_at_Zfp821_5end | |||
|id=chr8:112229478..112229536,+ | |||
|ontology_enrichment_celltype=CL:0000540!8.17e-14!33;CL:0000047!8.17e-14!33;CL:0000031!8.17e-14!33;CL:0000404!8.17e-14!33;CL:0000117!2.80e-12!23;CL:0000337!2.80e-12!23;CL:0000393!8.02e-11!39;CL:0000211!8.02e-11!39;CL:0000221!5.96e-10!44;CL:0000133!5.96e-10!44;CL:0002319!1.31e-09!43;CL:0000055!4.02e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.17e-14,33;CL:0000047,8.17e-14,33;CL:0000031,8.17e-14,33;CL:0000404,8.17e-14,33;CL:0000117,2.80e-12,23;CL:0000337,2.80e-12,23;CL:0000393,8.02e-11,39;CL:0000211,8.02e-11,39;CL:0000221,5.96e-10,44;CL:0000133,5.96e-10,44;CL:0002319,1.30e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.79e-18!73;UBERON:0005743!3.79e-18!73;UBERON:0004121!2.15e-17!102;UBERON:0000924!2.15e-17!102;UBERON:0006601!2.15e-17!102;UBERON:0000073!5.94e-17!75;UBERON:0001016!5.94e-17!75;UBERON:0000033!1.26e-13!63;UBERON:0002346!3.51e-13!71;UBERON:0003075!3.51e-13!71;UBERON:0007284!3.51e-13!71;UBERON:0003056!3.80e-13!49;UBERON:0001049!7.82e-13!52;UBERON:0005068!7.82e-13!52;UBERON:0006241!7.82e-13!52;UBERON:0007135!7.82e-13!52;UBERON:0000955!8.53e-12!50;UBERON:0006238!8.53e-12!50;UBERON:0002780!1.67e-11!39;UBERON:0001890!1.67e-11!39;UBERON:0006240!1.67e-11!39;UBERON:0002616!2.58e-11!49;UBERON:0002020!3.00e-11!34;UBERON:0003080!5.07e-11!40;UBERON:0002791!1.45e-08!29;UBERON:0003528!1.45e-08!29;UBERON:0001893!1.45e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.49e-20,95;UBERON:0000924,7.49e-20,95;UBERON:0006601,7.49e-20,95;UBERON:0001017,3.78e-18,73;UBERON:0010371,4.87e-17,73;UBERON:0001016,5.94e-17,75;UBERON:0002346,6.73e-16,64;UBERON:0003075,6.73e-16,64;UBERON:0007284,6.73e-16,64;UBERON:0000073,5.35e-14,54;UBERON:0003056,3.80e-13,49;UBERON:0001049,7.82e-13,52;UBERON:0005068,7.82e-13,52;UBERON:0006241,7.82e-13,52;UBERON:0007135,7.82e-13,52;UBERON:0010314,2.27e-12,92;UBERON:0002780,1.67e-11,39;UBERON:0001890,1.67e-11,39;UBERON:0006240,1.67e-11,39;UBERON:0002020,3.00e-11,34;UBERON:0003080,5.07e-11,40;UBERON:0000955,7.18e-11,47;UBERON:0006238,7.18e-11,47;UBERON:0002616,2.13e-10,46;UBERON:0003528,1.45e-08,29;UBERON:0002791,1.45e-08,29;UBERON:0001893,1.45e-08,29 | |||
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| ||
|short_description=p1@Zfp821 | |||
}} | }} |
Latest revision as of 11:53, 1 October 2015
Short description: | p1@Zfp821 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp821_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 29bp_to_ENSMUST00000034163, NM_001167946, NR_030772, NR_030773, uc009njc.2, uc009njd.2, uc009nje.2_5end |
EntrezGene: | Zfp821 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.17e-14 | 33 |
neuronal stem cell | 8.17e-14 | 33 |
neuroblast | 8.17e-14 | 33 |
electrically signaling cell | 8.17e-14 | 33 |
CNS neuron (sensu Vertebrata) | 2.80e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.80e-12 | 23 |
electrically responsive cell | 8.02e-11 | 39 |
electrically active cell | 8.02e-11 | 39 |
ectodermal cell | 5.96e-10 | 44 |
neurectodermal cell | 5.96e-10 | 44 |
neural cell | 1.30e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 7.49e-20 | 95 |
ectoderm | 7.49e-20 | 95 |
presumptive ectoderm | 7.49e-20 | 95 |
central nervous system | 3.78e-18 | 73 |
ecto-epithelium | 4.87e-17 | 73 |
nervous system | 5.94e-17 | 75 |
neurectoderm | 6.73e-16 | 64 |
neural plate | 6.73e-16 | 64 |
presumptive neural plate | 6.73e-16 | 64 |
regional part of nervous system | 5.35e-14 | 54 |
pre-chordal neural plate | 3.80e-13 | 49 |
neural tube | 7.82e-13 | 52 |
neural rod | 7.82e-13 | 52 |
future spinal cord | 7.82e-13 | 52 |
neural keel | 7.82e-13 | 52 |
structure with developmental contribution from neural crest | 2.27e-12 | 92 |
regional part of forebrain | 1.67e-11 | 39 |
forebrain | 1.67e-11 | 39 |
future forebrain | 1.67e-11 | 39 |
gray matter | 3.00e-11 | 34 |
anterior neural tube | 5.07e-11 | 40 |
brain | 7.18e-11 | 47 |
future brain | 7.18e-11 | 47 |
regional part of brain | 2.13e-10 | 46 |
brain grey matter | 1.45e-08 | 29 |
regional part of telencephalon | 1.45e-08 | 29 |
telencephalon | 1.45e-08 | 29 |