FFCP PHASE1:Mm9::chr8:13869673..13869740,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:13869673..13869740,+
|short_description=p1@Zfp828
|description=CAGE_peak_1_at_Zfp828_5end
|association_with_transcript=0bp_to_ENSMUST00000128557,uc009kyp.2...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=101994 | |EntrezGene=101994 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=398 | |||
|TSSclassifier=NA | |||
|UniProt=D3YUI1,Q8K327 | |UniProt=D3YUI1,Q8K327 | ||
|association_with_transcript=0bp_to_ENSMUST00000128557,uc009kyp.2_5end | |||
|cluster_id=chr8:13869673..13869740,+ | |||
|description=CAGE_peak_1_at_Zfp828_5end | |||
|id=chr8:13869673..13869740,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.02e-11!33;CL:0000047!1.02e-11!33;CL:0000031!1.02e-11!33;CL:0000404!1.02e-11!33;CL:0000393!6.54e-10!39;CL:0000211!6.54e-10!39;CL:0000117!1.08e-09!23;CL:0000337!1.08e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.02e-11,33;CL:0000047,1.02e-11,33;CL:0000031,1.02e-11,33;CL:0000404,1.02e-11,33;CL:0000393,6.54e-10,39;CL:0000211,6.54e-10,39;CL:0000117,1.08e-09,23;CL:0000337,1.08e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!4.78e-14!94;UBERON:0004121!1.99e-13!102;UBERON:0000924!1.99e-13!102;UBERON:0006601!1.99e-13!102;UBERON:0002346!3.04e-13!71;UBERON:0003075!3.04e-13!71;UBERON:0007284!3.04e-13!71;UBERON:0001017!6.94e-12!73;UBERON:0005743!6.94e-12!73;UBERON:0007811!3.24e-11!86;UBERON:0000073!3.45e-11!75;UBERON:0001016!3.45e-11!75;UBERON:0003056!6.55e-11!49;UBERON:0000033!3.59e-10!63;UBERON:0002020!5.80e-10!34;UBERON:0001049!1.68e-09!52;UBERON:0005068!1.68e-09!52;UBERON:0006241!1.68e-09!52;UBERON:0007135!1.68e-09!52;UBERON:0000955!2.06e-08!50;UBERON:0006238!2.06e-08!50;UBERON:0003080!2.84e-08!40;UBERON:0002791!5.06e-08!29;UBERON:0003528!5.06e-08!29;UBERON:0001893!5.06e-08!29;UBERON:0002616!5.08e-08!49;UBERON:0002780!8.27e-08!39;UBERON:0001890!8.27e-08!39;UBERON:0006240!8.27e-08!39;UBERON:0000475!8.18e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.49e-13,64;UBERON:0003075,8.49e-13,64;UBERON:0007284,8.49e-13,64;UBERON:0004121,9.18e-13,95;UBERON:0000924,9.18e-13,95;UBERON:0006601,9.18e-13,95;UBERON:0010371,5.68e-12,73;UBERON:0001017,6.94e-12,73;UBERON:0001016,3.45e-11,75;UBERON:0003056,6.55e-11,49;UBERON:0002020,5.80e-10,34;UBERON:0000073,7.94e-10,54;UBERON:0001049,1.68e-09,52;UBERON:0005068,1.68e-09,52;UBERON:0006241,1.68e-09,52;UBERON:0007135,1.68e-09,52;UBERON:0003080,2.84e-08,40;UBERON:0000955,2.93e-08,47;UBERON:0006238,2.93e-08,47;UBERON:0003528,5.06e-08,29;UBERON:0002791,5.06e-08,29;UBERON:0001893,5.06e-08,29;UBERON:0002616,7.27e-08,46;UBERON:0002780,8.27e-08,39;UBERON:0001890,8.27e-08,39;UBERON:0006240,8.27e-08,39 | |||
|phase1_expression=21.1396478178328,7.32848356042658,6.82498859084304,3.32710632437513,3.00537437967808,10.2406355866253,10.5125688267987,17.5607719880544,28.0169557081817,25.7470978954193,48.9683389124944,59.510030610521,14.5520620441525,13.9872643870396,20.9859149943868,13.5658429151183,10.4934281719222,15.2999150198745,18.921791837592,12.7316895539409,18.0291775120268,23.9291192394134,27.1647780704493,9.5995453676044,10.782236210157,6.89078356938024,7.75371593086335,10.5580904016086,9.5011709728187,8.56902441183765,8.86922042621219,36.8317790606586,33.8285633171514,0,10.9763615505484,11.3039558843775,6.12508068787107,5.85944283031671,7.0320181007142,5.75876118371178,4.1176204162171,4.78131839470912,5.82612423637384,25.9347445029689,24.431840423903,19.6395024812999,6.25913075478431,12.6454590700659,10.9843091367236,20.9984291000226,16.6583841734181,14.3752564364972,11.2414346058683,7.97898356212479,12.4354705682712,15.9500850342287,17.4785398362642,18.0485232297105,59.8856724144409,62.9499265333719,50.0726808769882,10.8430250262122,12.450127145556,9.89889689009539,12.8552627133707,7.104801149461,10.7856039786626,9.60545763303886,40.7500176372317,43.6069180811361,37.0171931978432,28.8507494247842,27.6085676189517,41.5243809338694,46.1016715597717,39.5264078242309,23.1243350098716,27.5804650264005,22.8873734551803,61.1952375068099,66.9689551169639,53.1331637967895,20.9387249251036,19.6966913511088,26.586895113165,34.4715445004191,38.0132387733605,53.310241506036,17.5684768532987,16.0967423027453,10.1452571045587,6.0229671388697,9.51959867190851,5.39703191637817,5.84798775702902,9.40856462904405,13.9039975930434,19.2586264513205,16.3665182899807,16.9602995764963,17.6054274720851,12.8326477414318,12.7402619853323,7.11066703153331,11.0410430915719,15.454951793981,11.62706223534,12.1034912502204,35.4744900596625,30.7275227864187,24.6349164007913,27.0974275697806,23.0615497256059,17.7852715852095,27.6333461768906,23.625319169979,15.5732829672656,19.665512541108,26.5383165584962,17.6325866442676,13.471332626084,17.9403843660032,14.9113408974498,36.8903804234549,25.3430515244281,12.7728527604296,15.4561510612637,9.59844369589452,16.5191295194984,37.8970317694201,30.1950397860293,46.6177646338727,35.9816342798012,31.1972857943003,31.168206683934,24.1739481970959,36.1529741668623,14.8044295026011,19.459652399393,22.5172785798527,37.7349284591841,29.8872735763515,35.6523017014591,29.5381442958002,33.7461035790586,34.4625907566246,28.2042190924784,28.4573707812917,40.0956466855087,38.3885342740673,31.1433489770189,31.3449897371432,33.0876226578461,25.074155989596,26.9574598694406,27.6657630877706,11.2354109970118,16.7276139624565,14.7765019685708,20.7125772535502,17.5894544985822,14.0448407939592,22.7274946161802,17.7087808572663,13.5755059340893,12.7893669612724,11.5357562601836,11.2094728672483,11.0255099442032,14.6109043030395,12.0792526223325,10.8187990694746,11.6361561104257,11.2733391758712,32.5949420274397,50.1145462287115,10.5734010554815,10.5780226665418,36.8988673425955,29.7262939981361,30.9281907173024,21.3784536100743,19.1245117706588,19.403013863481,9.96511029243474,17.7874871101932,16.3367885720175,15.1206918751275,18.1316601020782,9.88701349519644,11.4553166433588,11.3510525754989,35.8472332801324,24.9061757489209,32.6852433451933,25.6600673085096,25.6017283061266,24.5475369616115,19.7930361198925,20.6654207171443,17.8978549739167,15.6714398180687,8.89357881261447,32.3679505089222,33.8081471594709,28.1077640481067,19.8802918960733,19.0529956204409,15.786802810448,18.4125527968519,19.2940919862292,16.748246204473,15.814502718009,14.8856379067401,12.1694692514679,11.8712072635143,11.8402292924462,13.0259750768109,17.9210594461607,32.9715056480644,30.6374155711009,26.6499784667045,24.8771663185812,23.1158635269706,28.8032805472077,16.5863600679129,21.438379598442,17.4957104822532,20.8885746941308,16.3863314715738,11.9152637487468,15.9113964439663,9.04747703635634,10.3342079925555,18.6870423747234,25.3861806600354,30.0229603277171,26.0209944234691,23.2787622434879,13.3809591418318,21.4545589203055,30.0637833108412,32.7443564553854,32.4997565215471,31.1918143715352,31.7045714483492,32.7896668356664,24.2572362066389,33.204173347508,35.024023489977,30.659058404986,36.6815143554546,37.3011136919689,27.714980659386,13.2745138339963,30.3475795193727,26.3021494559333,18.8605079755898,24.2147552162234,21.8278955040189,15.5056975900933,15.9954840970102,19.9638531895444,21.4904995396355,11.5960469432499,13.4076206222643,15.6602218646742,27.3692862927592,25.2249433376371,20.5763553630329,22.5222096725687,21.9393645650547,22.3786668018885,28.9241701658869,17.1310346886509,15.4637411730589,17.8628002424519,17.9726015706213,26.3187015514326,23.1601631724118,20.4126708245363,25.7701212599746,14.8655226681224,20.3967832211561,22.7258271461144,24.3536504196603,25.1864557222808,18.6484772434644,21.871076435364,18.0734756833153,20.2274331692688,19.3133004206648,21.6973958872945,13.3653886522116,40.0165031880136,28.4647253977588,23.1131429358655,20.9088296014469,22.4913440658563,19.555330225799,24.3001159832488,16.7523802869779,13.4799572223465,18.0188400795208,28.1846469342095,38.2762357872586,30.7752792250202,32.473348453456,31.1275174581332,30.0741903373585,37.3196018893498,29.9470085141085,35.1278803826131,30.9227674657288,22.1783104818556,25.9129118915106,28.5842553559132,29.8888885349647,26.7636895334258,29.7184314808019,28.8087964432834,25.8420216467933,23.6303243479324,25.4435453869332,27.6630708157649,27.5255485423575,24.3644701849381,22.4173591021968,25.2454108712189,21.3126560598299,27.7482441717581,39.4740969081693,24.0075001400632,23.5691304719272,21.3958022014347,25.8243790216844,22.93741656146,22.069172577556,32.1908550291728,34.0640675015311,32.6550442660456,27.1528028103026,21.2375581128899,26.4387864086395,22.9507650078814,31.0721630224712,24.9228324941313,18.1216109113137,41.9300884240074,30.7249152518794,29.7076474012193,29.4159127652636,36.053463972013,24.0834996069519,25.5583736971858,25.7543821548618,25.994455976937,22.490051846978,24.334012789463,19.4285131627658,17.3236788819282,19.9758475503192,22.5147038306004,20.4806287251722,19.236798106846,19.4838312668342,19.7801232385587,19.5774563778748,18.8578088811978,17.0376773912964,18.3595866259437,22.2380017447463,20.7981730717881,18.4459845203855,19.0245091787683,21.3086466264653,18.7409677107289,19.6399795080208,20.5238581354821,19.2083740632349,15.1415485972785,20.7615367189194,26.4282057044164,39.4700713141955,22.6913660192046,21.9168475129264,24.484906504812,16.9855392722027,15.7670128221887 | |phase1_expression=21.1396478178328,7.32848356042658,6.82498859084304,3.32710632437513,3.00537437967808,10.2406355866253,10.5125688267987,17.5607719880544,28.0169557081817,25.7470978954193,48.9683389124944,59.510030610521,14.5520620441525,13.9872643870396,20.9859149943868,13.5658429151183,10.4934281719222,15.2999150198745,18.921791837592,12.7316895539409,18.0291775120268,23.9291192394134,27.1647780704493,9.5995453676044,10.782236210157,6.89078356938024,7.75371593086335,10.5580904016086,9.5011709728187,8.56902441183765,8.86922042621219,36.8317790606586,33.8285633171514,0,10.9763615505484,11.3039558843775,6.12508068787107,5.85944283031671,7.0320181007142,5.75876118371178,4.1176204162171,4.78131839470912,5.82612423637384,25.9347445029689,24.431840423903,19.6395024812999,6.25913075478431,12.6454590700659,10.9843091367236,20.9984291000226,16.6583841734181,14.3752564364972,11.2414346058683,7.97898356212479,12.4354705682712,15.9500850342287,17.4785398362642,18.0485232297105,59.8856724144409,62.9499265333719,50.0726808769882,10.8430250262122,12.450127145556,9.89889689009539,12.8552627133707,7.104801149461,10.7856039786626,9.60545763303886,40.7500176372317,43.6069180811361,37.0171931978432,28.8507494247842,27.6085676189517,41.5243809338694,46.1016715597717,39.5264078242309,23.1243350098716,27.5804650264005,22.8873734551803,61.1952375068099,66.9689551169639,53.1331637967895,20.9387249251036,19.6966913511088,26.586895113165,34.4715445004191,38.0132387733605,53.310241506036,17.5684768532987,16.0967423027453,10.1452571045587,6.0229671388697,9.51959867190851,5.39703191637817,5.84798775702902,9.40856462904405,13.9039975930434,19.2586264513205,16.3665182899807,16.9602995764963,17.6054274720851,12.8326477414318,12.7402619853323,7.11066703153331,11.0410430915719,15.454951793981,11.62706223534,12.1034912502204,35.4744900596625,30.7275227864187,24.6349164007913,27.0974275697806,23.0615497256059,17.7852715852095,27.6333461768906,23.625319169979,15.5732829672656,19.665512541108,26.5383165584962,17.6325866442676,13.471332626084,17.9403843660032,14.9113408974498,36.8903804234549,25.3430515244281,12.7728527604296,15.4561510612637,9.59844369589452,16.5191295194984,37.8970317694201,30.1950397860293,46.6177646338727,35.9816342798012,31.1972857943003,31.168206683934,24.1739481970959,36.1529741668623,14.8044295026011,19.459652399393,22.5172785798527,37.7349284591841,29.8872735763515,35.6523017014591,29.5381442958002,33.7461035790586,34.4625907566246,28.2042190924784,28.4573707812917,40.0956466855087,38.3885342740673,31.1433489770189,31.3449897371432,33.0876226578461,25.074155989596,26.9574598694406,27.6657630877706,11.2354109970118,16.7276139624565,14.7765019685708,20.7125772535502,17.5894544985822,14.0448407939592,22.7274946161802,17.7087808572663,13.5755059340893,12.7893669612724,11.5357562601836,11.2094728672483,11.0255099442032,14.6109043030395,12.0792526223325,10.8187990694746,11.6361561104257,11.2733391758712,32.5949420274397,50.1145462287115,10.5734010554815,10.5780226665418,36.8988673425955,29.7262939981361,30.9281907173024,21.3784536100743,19.1245117706588,19.403013863481,9.96511029243474,17.7874871101932,16.3367885720175,15.1206918751275,18.1316601020782,9.88701349519644,11.4553166433588,11.3510525754989,35.8472332801324,24.9061757489209,32.6852433451933,25.6600673085096,25.6017283061266,24.5475369616115,19.7930361198925,20.6654207171443,17.8978549739167,15.6714398180687,8.89357881261447,32.3679505089222,33.8081471594709,28.1077640481067,19.8802918960733,19.0529956204409,15.786802810448,18.4125527968519,19.2940919862292,16.748246204473,15.814502718009,14.8856379067401,12.1694692514679,11.8712072635143,11.8402292924462,13.0259750768109,17.9210594461607,32.9715056480644,30.6374155711009,26.6499784667045,24.8771663185812,23.1158635269706,28.8032805472077,16.5863600679129,21.438379598442,17.4957104822532,20.8885746941308,16.3863314715738,11.9152637487468,15.9113964439663,9.04747703635634,10.3342079925555,18.6870423747234,25.3861806600354,30.0229603277171,26.0209944234691,23.2787622434879,13.3809591418318,21.4545589203055,30.0637833108412,32.7443564553854,32.4997565215471,31.1918143715352,31.7045714483492,32.7896668356664,24.2572362066389,33.204173347508,35.024023489977,30.659058404986,36.6815143554546,37.3011136919689,27.714980659386,13.2745138339963,30.3475795193727,26.3021494559333,18.8605079755898,24.2147552162234,21.8278955040189,15.5056975900933,15.9954840970102,19.9638531895444,21.4904995396355,11.5960469432499,13.4076206222643,15.6602218646742,27.3692862927592,25.2249433376371,20.5763553630329,22.5222096725687,21.9393645650547,22.3786668018885,28.9241701658869,17.1310346886509,15.4637411730589,17.8628002424519,17.9726015706213,26.3187015514326,23.1601631724118,20.4126708245363,25.7701212599746,14.8655226681224,20.3967832211561,22.7258271461144,24.3536504196603,25.1864557222808,18.6484772434644,21.871076435364,18.0734756833153,20.2274331692688,19.3133004206648,21.6973958872945,13.3653886522116,40.0165031880136,28.4647253977588,23.1131429358655,20.9088296014469,22.4913440658563,19.555330225799,24.3001159832488,16.7523802869779,13.4799572223465,18.0188400795208,28.1846469342095,38.2762357872586,30.7752792250202,32.473348453456,31.1275174581332,30.0741903373585,37.3196018893498,29.9470085141085,35.1278803826131,30.9227674657288,22.1783104818556,25.9129118915106,28.5842553559132,29.8888885349647,26.7636895334258,29.7184314808019,28.8087964432834,25.8420216467933,23.6303243479324,25.4435453869332,27.6630708157649,27.5255485423575,24.3644701849381,22.4173591021968,25.2454108712189,21.3126560598299,27.7482441717581,39.4740969081693,24.0075001400632,23.5691304719272,21.3958022014347,25.8243790216844,22.93741656146,22.069172577556,32.1908550291728,34.0640675015311,32.6550442660456,27.1528028103026,21.2375581128899,26.4387864086395,22.9507650078814,31.0721630224712,24.9228324941313,18.1216109113137,41.9300884240074,30.7249152518794,29.7076474012193,29.4159127652636,36.053463972013,24.0834996069519,25.5583736971858,25.7543821548618,25.994455976937,22.490051846978,24.334012789463,19.4285131627658,17.3236788819282,19.9758475503192,22.5147038306004,20.4806287251722,19.236798106846,19.4838312668342,19.7801232385587,19.5774563778748,18.8578088811978,17.0376773912964,18.3595866259437,22.2380017447463,20.7981730717881,18.4459845203855,19.0245091787683,21.3086466264653,18.7409677107289,19.6399795080208,20.5238581354821,19.2083740632349,15.1415485972785,20.7615367189194,26.4282057044164,39.4700713141955,22.6913660192046,21.9168475129264,24.484906504812,16.9855392722027,15.7670128221887 | ||
|short_description=p1@Zfp828 | |||
}} | }} |
Latest revision as of 19:09, 1 October 2015
Short description: | p1@Zfp828 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp828_5end |
Coexpression cluster: | MCL_coexpression_mm9:398 |
Association with transcript: | 0bp_to_ENSMUST00000128557, uc009kyp.2_5end |
EntrezGene: | Zfp828 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.02e-11 | 33 |
neuronal stem cell | 1.02e-11 | 33 |
neuroblast | 1.02e-11 | 33 |
electrically signaling cell | 1.02e-11 | 33 |
electrically responsive cell | 6.54e-10 | 39 |
electrically active cell | 6.54e-10 | 39 |
CNS neuron (sensu Vertebrata) | 1.08e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 8.49e-13 | 64 |
neural plate | 8.49e-13 | 64 |
presumptive neural plate | 8.49e-13 | 64 |
ectoderm-derived structure | 9.18e-13 | 95 |
ectoderm | 9.18e-13 | 95 |
presumptive ectoderm | 9.18e-13 | 95 |
ecto-epithelium | 5.68e-12 | 73 |
central nervous system | 6.94e-12 | 73 |
nervous system | 3.45e-11 | 75 |
pre-chordal neural plate | 6.55e-11 | 49 |
gray matter | 5.80e-10 | 34 |
regional part of nervous system | 7.94e-10 | 54 |
neural tube | 1.68e-09 | 52 |
neural rod | 1.68e-09 | 52 |
future spinal cord | 1.68e-09 | 52 |
neural keel | 1.68e-09 | 52 |
anterior neural tube | 2.84e-08 | 40 |
brain | 2.93e-08 | 47 |
future brain | 2.93e-08 | 47 |
brain grey matter | 5.06e-08 | 29 |
regional part of telencephalon | 5.06e-08 | 29 |
telencephalon | 5.06e-08 | 29 |
regional part of brain | 7.27e-08 | 46 |
regional part of forebrain | 8.27e-08 | 39 |
forebrain | 8.27e-08 | 39 |
future forebrain | 8.27e-08 | 39 |