FFCP PHASE1:Mm9::chrX:147604163..147604202,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:147604163..147604202,+
|short_description=p1@ENSMUST00000151778
|description=CAGE_peak_1_at_ENSMUST00000151778_5end
|association_with_transcript=-40bp_to_E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3736 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_ENSMUST00000151778_5end | |||
|cluster_id=chrX:147604163..147604202,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000151778_5end | |||
|id=chrX:147604163..147604202,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.59e-11!33;CL:0000047!5.59e-11!33;CL:0000031!5.59e-11!33;CL:0000404!5.59e-11!33;CL:0000117!4.03e-10!23;CL:0000337!4.03e-10!23;CL:0000393!8.65e-08!39;CL:0000211!8.65e-08!39;CL:0000221!1.57e-07!44;CL:0000133!1.57e-07!44;CL:0002319!1.76e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.43e-10,23;CL:0000337,2.43e-10,23;CL:0000540,3.79e-09,33;CL:0000047,3.79e-09,33;CL:0000031,3.79e-09,33;CL:0000404,3.79e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.59e-17!71;UBERON:0003075!4.59e-17!71;UBERON:0007284!4.59e-17!71;UBERON:0001017!1.02e-15!73;UBERON:0005743!1.02e-15!73;UBERON:0000073!3.15e-15!75;UBERON:0001016!3.15e-15!75;UBERON:0000033!3.33e-15!63;UBERON:0004121!5.20e-15!102;UBERON:0000924!5.20e-15!102;UBERON:0006601!5.20e-15!102;UBERON:0003056!8.11e-15!49;UBERON:0001049!1.60e-13!52;UBERON:0005068!1.60e-13!52;UBERON:0006241!1.60e-13!52;UBERON:0007135!1.60e-13!52;UBERON:0000955!2.10e-12!50;UBERON:0006238!2.10e-12!50;UBERON:0002616!3.58e-12!49;UBERON:0003080!6.07e-11!40;UBERON:0002780!2.08e-10!39;UBERON:0001890!2.08e-10!39;UBERON:0006240!2.08e-10!39;UBERON:0002020!2.11e-10!34;UBERON:0002791!2.16e-08!29;UBERON:0003528!2.16e-08!29;UBERON:0001893!2.16e-08!29;UBERON:0000468!6.00e-08!333;UBERON:0000153!1.42e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.41e-12,64;UBERON:0003075,1.41e-12,64;UBERON:0007284,1.41e-12,64;UBERON:0003056,2.34e-11,49;UBERON:0010371,5.72e-10,73;UBERON:0001017,1.58e-09,73;UBERON:0000073,2.48e-09,54;UBERON:0004121,4.12e-09,95;UBERON:0000924,4.12e-09,95;UBERON:0006601,4.12e-09,95;UBERON:0001016,6.12e-09,75;UBERON:0001049,5.32e-08,52;UBERON:0005068,5.32e-08,52;UBERON:0006241,5.32e-08,52;UBERON:0007135,5.32e-08,52;UBERON:0003080,7.57e-08,40;UBERON:0002020,1.06e-07,34;UBERON:0000955,2.21e-07,47;UBERON:0006238,2.21e-07,47;UBERON:0002780,2.86e-07,39;UBERON:0001890,2.86e-07,39;UBERON:0006240,2.86e-07,39;UBERON:0002616,4.06e-07,46 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0.782391344348039,0.218025156380447,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,1.90149421051854,0,0,0,0,0,0,0,3.00699875694585,1.75507719831198,1.68259969081106,0.856952953211411,0.883474163806454,2.08234358665422,2.01275489138296,3.67687514644008,1.10115880999389,1.27687338085188,2.15049146558741,2.63772575460388,3.84248103130121,2.6045668527838,0.558365998002762,0.56276261003168,1.98637722109853,5.30331453852602,5.83723891276322,6.15118171223492,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0,0,0.867426633830679,0.608930956624282,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,2.69623150928681,1.37250180845588,5.02617408451458,1.73824320192276,0.511430914660661,1.45451631191692,0.973447578406546,0.81471491080253,0.124406970610093,0,0.420883711772948,4.42409506073193,2.5289231487682,3.96136685571768,3.0140963567143,3.40182495756639,2.3060469651273,2.15513966487376,0.776110112217047,3.66465587985832,2.83659120251729,3.69497360744293,1.09597866213787,1.94633074457919,1.39300866608867,0.411564272815887,2.7864797354589,0,0,0,0.414251545071004,1.17263029990548,0.540186184383045,0.710234206755631,0,0.462801338662135,0.465067889500816,0,0,0.16455984991348,0,0,0,0,0,1.05144974282064,7.30622747892919,0,0,2.55945900642281,2.09013004674395,2.19074684247559,0.605050573870028,1.55664630691409,0.190225626112559,0,0.164698954724011,0.754005626400808,0.198956472041151,0,0,0,0,0.379335801906163,1.25673363870702,1.1270773567308,0.814605311381257,0.969762435838129,0.631222379012867,0.379419222745544,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,2.65287976478679,2.11854469374634,1.01847051465113,0.938760993154008,0.167506257441816,0.238043640886014,0,0.315270288212382,0.44292937929755,0,0.163863314715738,0,0,0,0,0,0.275936746304732,1.60550589987792,1.64096361229084,0,0,1.26203287766503,2.34263246577983,1.29254038639679,0.716906393857656,0.891194696329576,0.566153061577665,1.61924280669958,0.292255857911312,0.395287777946524,1.28528526568723,0.851640511249612,0.534196811001766,0.488660878060728,0,0,0.485561272309963,2.41858845571801,0.754420319023592,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,3.6012218806262,0.388076051348264,1.71469628025274,1.41872186913819,1.60531935841864,1.81003922662333,0.913394847343798,0.704015124191131,0.847328283455281,0,0.32977250588296,0.161464426695906,0.241251699712623,0,0.164140899745061,0,0.927126510052548,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,4.58687190692646,1.82987520414164,1.08005340821801,0.209088296014469,0.655087691238533,0.134864346384821,0.330613822901344,0,0,0,0,2.69129782879162,1.48912641411388,1.36115831840833,2.32487682259916,1.85851738039856,2.22978753426933,3.6457227756306,6.60613869881978,4.34851417486811,2.01621004380506,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,3.32978930061097,2.33256027184637,1.00730769818447,0,0,0.36630324853453,0.214368379079066,0,0.564751842617067,0.920650473014354,2.86447756719698,0.515559547031063,2.05524755931193,2.2661816921691,0.675022500231806,0.900642406448441,0.906284817968409,1.55328093525546,7.16132698330819,11.5717213286299,2.04880326904961,1.94485373654635,1.25767897576789,1.10306105070008,1.77797382241292,1.85431551515005,1.60459604795908,1.01078884705519,1.77435509923168,1.88626341386076,1.96647165686753,2.30490548657529,2.41228969613576,0.952587382566147,1.62238056322798,0.964546102318525,2.47251540481984,2.20798380201596,1.02860775715625,1.77475806159337,1.1921809497366,2.18019624948493,1.69396884747595,1.60767754994185,1.46342378298218,1.31534855718921,2.03706170768793,0.561142271657738,1.66089025373844,1.37906275325789,1.22769312950907,1.39443157067369,1.35034627686799,1.49886346762768,0.935726433781634,1.07435527024149,0.382576664137687,0.220591419119515,0.231867835620421 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|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0.782391344348039,0.218025156380447,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,1.90149421051854,0,0,0,0,0,0,0,3.00699875694585,1.75507719831198,1.68259969081106,0.856952953211411,0.883474163806454,2.08234358665422,2.01275489138296,3.67687514644008,1.10115880999389,1.27687338085188,2.15049146558741,2.63772575460388,3.84248103130121,2.6045668527838,0.558365998002762,0.56276261003168,1.98637722109853,5.30331453852602,5.83723891276322,6.15118171223492,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0,0,0.867426633830679,0.608930956624282,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,2.69623150928681,1.37250180845588,5.02617408451458,1.73824320192276,0.511430914660661,1.45451631191692,0.973447578406546,0.81471491080253,0.124406970610093,0,0.420883711772948,4.42409506073193,2.5289231487682,3.96136685571768,3.0140963567143,3.40182495756639,2.3060469651273,2.15513966487376,0.776110112217047,3.66465587985832,2.83659120251729,3.69497360744293,1.09597866213787,1.94633074457919,1.39300866608867,0.411564272815887,2.7864797354589,0,0,0,0.414251545071004,1.17263029990548,0.540186184383045,0.710234206755631,0,0.462801338662135,0.465067889500816,0,0,0.16455984991348,0,0,0,0,0,1.05144974282064,7.30622747892919,0,0,2.55945900642281,2.09013004674395,2.19074684247559,0.605050573870028,1.55664630691409,0.190225626112559,0,0.164698954724011,0.754005626400808,0.198956472041151,0,0,0,0,0.379335801906163,1.25673363870702,1.1270773567308,0.814605311381257,0.969762435838129,0.631222379012867,0.379419222745544,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,2.65287976478679,2.11854469374634,1.01847051465113,0.938760993154008,0.167506257441816,0.238043640886014,0,0.315270288212382,0.44292937929755,0,0.163863314715738,0,0,0,0,0,0.275936746304732,1.60550589987792,1.64096361229084,0,0,1.26203287766503,2.34263246577983,1.29254038639679,0.716906393857656,0.891194696329576,0.566153061577665,1.61924280669958,0.292255857911312,0.395287777946524,1.28528526568723,0.851640511249612,0.534196811001766,0.488660878060728,0,0,0.485561272309963,2.41858845571801,0.754420319023592,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,3.6012218806262,0.388076051348264,1.71469628025274,1.41872186913819,1.60531935841864,1.81003922662333,0.913394847343798,0.704015124191131,0.847328283455281,0,0.32977250588296,0.161464426695906,0.241251699712623,0,0.164140899745061,0,0.927126510052548,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,4.58687190692646,1.82987520414164,1.08005340821801,0.209088296014469,0.655087691238533,0.134864346384821,0.330613822901344,0,0,0,0,2.69129782879162,1.48912641411388,1.36115831840833,2.32487682259916,1.85851738039856,2.22978753426933,3.6457227756306,6.60613869881978,4.34851417486811,2.01621004380506,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,3.32978930061097,2.33256027184637,1.00730769818447,0,0,0.36630324853453,0.214368379079066,0,0.564751842617067,0.920650473014354,2.86447756719698,0.515559547031063,2.05524755931193,2.2661816921691,0.675022500231806,0.900642406448441,0.906284817968409,1.55328093525546,7.16132698330819,11.5717213286299,2.04880326904961,1.94485373654635,1.25767897576789,1.10306105070008,1.77797382241292,1.85431551515005,1.60459604795908,1.01078884705519,1.77435509923168,1.88626341386076,1.96647165686753,2.30490548657529,2.41228969613576,0.952587382566147,1.62238056322798,0.964546102318525,2.47251540481984,2.20798380201596,1.02860775715625,1.77475806159337,1.1921809497366,2.18019624948493,1.69396884747595,1.60767754994185,1.46342378298218,1.31534855718921,2.03706170768793,0.561142271657738,1.66089025373844,1.37906275325789,1.22769312950907,1.39443157067369,1.35034627686799,1.49886346762768,0.935726433781634,1.07435527024149,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p1@ENSMUST00000151778 | |||
}} | }} |
Latest revision as of 02:16, 6 August 2015
Short description: | p1@ENSMUST00000151778 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000151778_5end |
Coexpression cluster: | MCL_coexpression_mm9:3736 |
Association with transcript: | -40bp_to_ENSMUST00000151778_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.43e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.43e-10 | 23 |
neuron | 3.79e-09 | 33 |
neuronal stem cell | 3.79e-09 | 33 |
neuroblast | 3.79e-09 | 33 |
electrically signaling cell | 3.79e-09 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.41e-12 | 64 |
neural plate | 1.41e-12 | 64 |
presumptive neural plate | 1.41e-12 | 64 |
pre-chordal neural plate | 2.34e-11 | 49 |
ecto-epithelium | 5.72e-10 | 73 |
central nervous system | 1.58e-09 | 73 |
regional part of nervous system | 2.48e-09 | 54 |
ectoderm-derived structure | 4.12e-09 | 95 |
ectoderm | 4.12e-09 | 95 |
presumptive ectoderm | 4.12e-09 | 95 |
nervous system | 6.12e-09 | 75 |
neural tube | 5.32e-08 | 52 |
neural rod | 5.32e-08 | 52 |
future spinal cord | 5.32e-08 | 52 |
neural keel | 5.32e-08 | 52 |
anterior neural tube | 7.57e-08 | 40 |
gray matter | 1.06e-07 | 34 |
brain | 2.21e-07 | 47 |
future brain | 2.21e-07 | 47 |
regional part of forebrain | 2.86e-07 | 39 |
forebrain | 2.86e-07 | 39 |
future forebrain | 2.86e-07 | 39 |
regional part of brain | 4.06e-07 | 46 |