FFCP PHASE1:Mm9::chrX:148235416..148235455,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:148235416..148235455,+
|short_description=p2@Huwe1
|description=CAGE_peak_2_at_Huwe1_5end
|association_with_transcript=0bp_to_ENSMUST00000139386_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=59026 | |EntrezGene=59026 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=321 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000139386_5end | |||
|cluster_id=chrX:148235416..148235455,+ | |||
|description=CAGE_peak_2_at_Huwe1_5end | |||
|id=chrX:148235416..148235455,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.28e-13!33;CL:0000047!2.28e-13!33;CL:0000031!2.28e-13!33;CL:0000404!2.28e-13!33;CL:0000117!1.46e-09!23;CL:0000337!1.46e-09!23;CL:0000393!3.83e-09!39;CL:0000211!3.83e-09!39;CL:0000221!7.50e-07!44;CL:0000133!7.50e-07!44;CL:0002319!9.45e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.69e-13,33;CL:0000047,1.69e-13,33;CL:0000031,1.69e-13,33;CL:0000404,1.69e-13,33;CL:0000117,1.19e-09,23;CL:0000337,1.19e-09,23;CL:0000393,1.95e-09,39;CL:0000211,1.95e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.66e-14!73;UBERON:0005743!5.66e-14!73;UBERON:0002346!1.29e-13!71;UBERON:0003075!1.29e-13!71;UBERON:0007284!1.29e-13!71;UBERON:0000073!1.07e-12!75;UBERON:0001016!1.07e-12!75;UBERON:0004121!3.19e-12!102;UBERON:0000924!3.19e-12!102;UBERON:0006601!3.19e-12!102;UBERON:0003056!8.70e-12!49;UBERON:0000033!3.71e-11!63;UBERON:0001049!3.11e-10!52;UBERON:0005068!3.11e-10!52;UBERON:0006241!3.11e-10!52;UBERON:0007135!3.11e-10!52;UBERON:0002020!3.64e-09!34;UBERON:0000153!3.84e-09!94;UBERON:0000955!1.12e-08!50;UBERON:0006238!1.12e-08!50;UBERON:0003080!1.53e-08!40;UBERON:0002616!3.08e-08!49;UBERON:0002780!3.33e-08!39;UBERON:0001890!3.33e-08!39;UBERON:0006240!3.33e-08!39;UBERON:0007811!2.07e-07!86;UBERON:0002791!7.56e-07!29;UBERON:0003528!7.56e-07!29;UBERON:0001893!7.56e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.25e-14,64;UBERON:0003075,2.25e-14,64;UBERON:0007284,2.25e-14,64;UBERON:0001017,9.85e-14,73;UBERON:0010371,1.58e-12,73;UBERON:0004121,1.69e-12,95;UBERON:0000924,1.69e-12,95;UBERON:0006601,1.69e-12,95;UBERON:0001016,2.10e-12,75;UBERON:0003056,1.39e-11,49;UBERON:0010314,1.64e-10,92;UBERON:0000073,2.82e-10,54;UBERON:0001049,4.81e-10,52;UBERON:0005068,4.81e-10,52;UBERON:0006241,4.81e-10,52;UBERON:0007135,4.81e-10,52;UBERON:0002020,6.28e-09,34;UBERON:0003080,2.49e-08,40;UBERON:0000955,3.49e-08,47;UBERON:0006238,3.49e-08,47;UBERON:0002780,5.39e-08,39;UBERON:0001890,5.39e-08,39;UBERON:0006240,5.39e-08,39;UBERON:0002616,9.58e-08,46 | |||
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| ||
|short_description=p2@Huwe1 | |||
}} | }} |
Latest revision as of 16:40, 1 October 2015
Short description: | p2@Huwe1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Huwe1_5end |
Coexpression cluster: | MCL_coexpression_mm9:321 |
Association with transcript: | 0bp_to_ENSMUST00000139386_5end |
EntrezGene: | Huwe1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.69e-13 | 33 |
neuronal stem cell | 1.69e-13 | 33 |
neuroblast | 1.69e-13 | 33 |
electrically signaling cell | 1.69e-13 | 33 |
CNS neuron (sensu Vertebrata) | 1.19e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.19e-09 | 23 |
electrically responsive cell | 1.95e-09 | 39 |
electrically active cell | 1.95e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.25e-14 | 64 |
neural plate | 2.25e-14 | 64 |
presumptive neural plate | 2.25e-14 | 64 |
central nervous system | 9.85e-14 | 73 |
ecto-epithelium | 1.58e-12 | 73 |
ectoderm-derived structure | 1.69e-12 | 95 |
ectoderm | 1.69e-12 | 95 |
presumptive ectoderm | 1.69e-12 | 95 |
nervous system | 2.10e-12 | 75 |
pre-chordal neural plate | 1.39e-11 | 49 |
structure with developmental contribution from neural crest | 1.64e-10 | 92 |
regional part of nervous system | 2.82e-10 | 54 |
neural tube | 4.81e-10 | 52 |
neural rod | 4.81e-10 | 52 |
future spinal cord | 4.81e-10 | 52 |
neural keel | 4.81e-10 | 52 |
gray matter | 6.28e-09 | 34 |
anterior neural tube | 2.49e-08 | 40 |
brain | 3.49e-08 | 47 |
future brain | 3.49e-08 | 47 |
regional part of forebrain | 5.39e-08 | 39 |
forebrain | 5.39e-08 | 39 |
future forebrain | 5.39e-08 | 39 |
regional part of brain | 9.58e-08 | 46 |