FFCP PHASE1:Hg19::chr10:79397316..79397327,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:79397316..79397327,- to FFCP PHASE1:Hg19::chr10:79397316..79397327,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3778 | |EntrezGene=3778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6284 | |HGNC=6284 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000286628,ENST00000457953_5end | |||
|cluster_id=chr10:79397316..79397327,- | |||
|description=CAGE_peak_9_at_KCNMA1_5end | |||
|id=chr10:79397316..79397327,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002619;7.13e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,4.18e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.05e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;7.13e-08;3!DOID:127;7.13e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.83e-08,3;DOID:127,4.83e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.93e-14!57;UBERON:0005068!7.93e-14!57;UBERON:0006241!7.93e-14!57;UBERON:0007135!7.93e-14!57;UBERON:0000033!1.31e-13!123;UBERON:0004121!2.56e-13!169;UBERON:0001893!5.46e-13!34;UBERON:0000924!7.68e-13!173;UBERON:0006601!7.68e-13!173;UBERON:0001869!7.89e-13!32;UBERON:0000956!8.59e-13!25;UBERON:0000203!8.59e-13!25;UBERON:0005743!9.05e-13!86;UBERON:0000955!1.28e-12!69;UBERON:0006238!1.28e-12!69;UBERON:0002780!1.45e-12!41;UBERON:0001890!1.45e-12!41;UBERON:0006240!1.45e-12!41;UBERON:0001017!1.70e-12!82;UBERON:0002791!2.68e-12!33;UBERON:0000153!2.92e-12!129;UBERON:0007811!2.92e-12!129;UBERON:0000073!5.24e-12!94;UBERON:0001016!5.24e-12!94;UBERON:0003080!5.73e-12!42;UBERON:0002020!9.94e-12!34;UBERON:0003528!9.94e-12!34;UBERON:0002619!1.50e-11!22;UBERON:0007023!2.35e-11!115;UBERON:0002616!1.08e-10!59;UBERON:0001950!1.11e-10!20;UBERON:0000062!1.44e-09!511;UBERON:0003075!1.90e-09!86;UBERON:0007284!1.90e-09!86;UBERON:0002346!7.56e-09!90;UBERON:0000475!7.71e-09!365;UBERON:0000468!1.64e-08!659;UBERON:0000467!1.86e-08!625;UBERON:0000480!2.46e-08!626;UBERON:0003056!5.21e-08!61;UBERON:0002050!9.59e-08!605;UBERON:0005423!9.59e-08!605;UBERON:0000922!1.60e-07!612;UBERON:0000923!1.75e-07!604;UBERON:0005291!1.75e-07!604;UBERON:0006598!1.75e-07!604;UBERON:0002532!1.75e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.55e-21;20!UBERON:0002619;2.61e-19;22!UBERON:0000956;1.28e-16;25!UBERON:0000203;1.28e-16;25!UBERON:0001869;2.57e-14;32!UBERON:0000200;4.48e-14;6!UBERON:0001893;6.75e-14;34!UBERON:0003528;2.45e-12;34!UBERON:0002020;2.45e-12;34!UBERON:0002791;2.46e-12;32!UBERON:0002780;5.64e-09;41!UBERON:0001890;5.64e-09;41!UBERON:0001870;2.47e-08;3!UBERON:0000073;3.39e-08;53!UBERON:0002616;3.39e-08;53!UBERON:0001872;7.98e-08;5!UBERON:0000955;9.49e-07;68!UBERON:0001017;9.66e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.12e-22,20;UBERON:0002619,1.29e-19,22;UBERON:0000956,6.95e-17,25;UBERON:0000203,6.95e-17,25;UBERON:0001869,1.93e-16,32;UBERON:0001893,3.08e-15,34;UBERON:0002791,2.38e-14,32;UBERON:0000955,3.97e-14,68;UBERON:0006238,3.97e-14,68;UBERON:0000073,8.56e-14,53;UBERON:0002616,8.56e-14,53;UBERON:0000200,1.04e-13,6;UBERON:0002780,1.91e-13,41;UBERON:0001890,1.91e-13,41;UBERON:0003080,1.91e-13,41;UBERON:0006240,1.91e-13,41;UBERON:0003528,2.74e-13,34;UBERON:0002020,2.74e-13,34;UBERON:0001017,3.67e-13,81;UBERON:0001049,9.05e-13,56;UBERON:0005068,9.05e-13,56;UBERON:0006241,9.05e-13,56;UBERON:0007135,9.05e-13,56;UBERON:0001016,3.52e-11,89;UBERON:0007023,1.83e-10,114;UBERON:0001870,1.44e-08,3;UBERON:0004121,2.11e-08,171;UBERON:0000924,2.11e-08,171;UBERON:0006601,2.11e-08,171;UBERON:0001872,9.61e-08,5;UBERON:0003056,1.19e-07,61;UBERON:0003075,4.09e-07,82;UBERON:0007284,4.09e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,1.05506791291381,0.618831764800233,0.662794751455832,0,1.20538905604795,0,0.487932798790507,0.492484232307152,0,0.313454721478088,0.286235987131057,0.958120975510189,0.87879847716362,0.152826811495903,0,0.157421562627358,0,0,0,0.919421224478927,0,0.369754010166788,0,0.426507697462265,0,0,0,0,1.56740831967947,2.26725566213286,1.54545340580512,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.579386075843295,2.3858578411533,1.45990461090791,0.189069634328136,0.221729397462564,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0.485618833104395,0.421352420106746,0.61246251376468,1.10550885580591,0.516628905878827,0,0.741800787835671,0,0,0.168336113954066,0.875829639103749,1.93944880838928,1.75591048352335,0.612975591598039,0.45071417671979,0,1.25572744982203,0.640672166455702,0,1.50045548042201,0.412210116953756,0.257640540045629,0.558350568994769,1.68776332241266,0.0974370051611986,0.504867548488229,0.368199594569197,0,1.77504796258307,0.302256294682921,0.508681776931463,0.193260853163297,0,0.573609190778008,0,0,0.116193942869518,0,0,0,0,0,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.463721619900307,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0,0,0,0.141775097242386,0.358234090811393,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.1466765716419,1.29271715757778,0,0,0,1.04007436911366,0.771622122786426,0,0.266422179016099,0,1.08524321078289,0,0,0,0,0.904318131178758,0,0.299918973546171,0,1.50677127429638,0,0.479249710983165,2.29723871668228,1.42636905040718,1.01346914667305,0.61642896765115,0.179060963239896,0,0,0,0,1.01637849688985,0,0,0.167516265334349,0,0,0,0,0.981531933753119,0,0,0.207970861530807,0.713715955188647,0.473107245101804,0.702848489956279,1.20378439891088,0,0,0,0.921845842708516,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,0,0,0.280660094433074,0.896974044789907,0,0.321707842287215,0,0.462629081407967,0,0.328508624055237,0,0.116210378459959,0,0,0,0.229628896329213,0.182091168006717,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0,0.54941678891006,0.577566499444116,0.574265537996172,0,0,0.290012154876366,0.462145851343933,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0.464845549297286,1.25924938732256,0,0,0.532306030317022,0,2.22389062924704,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0.48763373908959,0,0,0,0,0,1.10273068709225,0,0,0,0,0.608731130888112,0,0.563391205064483,0,0.196498082026242,0,1.06428319221179,0.844430541190656,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.47748896947538,0.296964680832639,0.614321404198464,0,1.68803299692615,0.890469640183247,0,0,1.9924798825107,0.552567831062295,0.251932747854276,0.20453736500431,0.123084805461069,0.311039587661807,0,0,0,1.1837208676432,0,2.22273980289274,0,0.556608588971108,0,0,1.31189999994294,0,0,0,0,0,0,0.173624994933292,0,0.723578631752448,6.10326945268333,1.76926815889959,1.77328571372128,0.658156191461918,0,0,1.61595542857974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89898258075224,0,0.141353071433941,0,0,0.442287822516696,0,0.593042257361244,0.370691816839509,0.522109747527277,0.269604531922708,0.802577647298789,0,0,0,1.21390189767046,1.57833761139756,0,0.91821828489147,2.27471686662557,0,0,0.664653872707185,0.661983911750998,1.2557316736289,0,0,1.38674673013139,0,0.0979923974143777,0,0.34945333648406,1.54787429224455,0,0,0,0.290967049465258,1.3238419003725,0.677942222341597,0.822251547880505,0.19871461170299,1.70939149080872,0,0,0.640358984218058,0,0,0,0,0,0.124252535565433,0,1.22313785466253,1.15063130943567,0.509991088181609,1.15580235960608,0,0,0,0.429765441419957,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,1.33649024647654,0,0,0,0.633602019116439,0,0,0,0,1.017074150619,2.17199840701485,1.72844298240254,1.30634944043764,0,0,0.340776043570843,0.113312091520126,0,0,0.387848869084652,0,0.171086837884329,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0.314108192500469,2.65820453990096,1.22026264901963,2.1282458220105,0,0,0.310482014706917,1.93688088910723,0.499921631848426,0,0,0.235265819698172,0,0.144921028610825,0,0.233713309847224,0,0.947015026375446,0.251567901752575,0,0.457680136793847,0.151230923763239,0.310874401165561,0,0.318593534327405,0.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| ||
|short_description=p9@KCNMA1 | |||
}} | }} |
Latest revision as of 10:17, 19 September 2015
Short description: | p9@KCNMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_KCNMA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000286628, ENST00000457953_5end |
EntrezGene: | KCNMA1 |
HGNC: | 6284 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 4.18e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
neocortex | 7.12e-22 | 20 |
regional part of cerebral cortex | 1.29e-19 | 22 |
cerebral cortex | 6.95e-17 | 25 |
pallium | 6.95e-17 | 25 |
cerebral hemisphere | 1.93e-16 | 32 |
telencephalon | 3.08e-15 | 34 |
regional part of telencephalon | 2.38e-14 | 32 |
brain | 3.97e-14 | 68 |
future brain | 3.97e-14 | 68 |
regional part of nervous system | 8.56e-14 | 53 |
regional part of brain | 8.56e-14 | 53 |
gyrus | 1.04e-13 | 6 |
regional part of forebrain | 1.91e-13 | 41 |
forebrain | 1.91e-13 | 41 |
anterior neural tube | 1.91e-13 | 41 |
future forebrain | 1.91e-13 | 41 |
brain grey matter | 2.74e-13 | 34 |
gray matter | 2.74e-13 | 34 |
central nervous system | 3.67e-13 | 81 |
neural tube | 9.05e-13 | 56 |
neural rod | 9.05e-13 | 56 |
future spinal cord | 9.05e-13 | 56 |
neural keel | 9.05e-13 | 56 |
nervous system | 3.52e-11 | 89 |
adult organism | 1.83e-10 | 114 |
frontal cortex | 1.44e-08 | 3 |
ectoderm-derived structure | 2.11e-08 | 171 |
ectoderm | 2.11e-08 | 171 |
presumptive ectoderm | 2.11e-08 | 171 |
parietal lobe | 9.61e-08 | 5 |
pre-chordal neural plate | 1.19e-07 | 61 |
neural plate | 4.09e-07 | 82 |
presumptive neural plate | 4.09e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.83e-08 | 3 |
leiomyoma | 4.83e-08 | 3 |