FFCP PHASE1:Hg19::chr10:8107688..8107696,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:8107688..8107696,+ to FFCP PHASE1:Hg19::chr10:8107688..8107696,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:8107688..8107696,+ | |||
|coexpression_cluster_id=C3051 | |||
|description=CAGE_peak_at_chr10:8107688..8107696,+ | |||
|id=chr10:8107688..8107696,+ | |||
|ontology_enrichment_celltype=CL:0000084!3.17e-12!25;CL:0000827!3.17e-12!25;CL:0000791!2.01e-10!18;CL:0000789!2.01e-10!18;CL:0002420!2.01e-10!18;CL:0002419!2.01e-10!18;CL:0000790!2.01e-10!18;CL:0000838!6.20e-10!52;CL:0000542!1.47e-09!53;CL:0000051!1.47e-09!53 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.23e-12;25!CL:0000791;3.51e-10;18!CL:0000789;3.51e-10;18!CL:0002419;3.51e-10;18!CL:0000623;6.56e-09;3!CL:0000624;1.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.82e-12,25;CL:0000827,2.82e-12,25;CL:0000791,3.51e-10,18;CL:0000789,3.51e-10,18;CL:0002420,3.51e-10,18;CL:0002419,3.51e-10,18;CL:0000790,3.51e-10,18;CL:0000623,7.30e-09,3;CL:0000825,7.30e-09,3;CL:0000838,1.37e-07,52;CL:0000624,1.66e-07,6;CL:0000542,2.22e-07,53;CL:0000051,2.22e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;3.51e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.67e-11;4!DOID:1612;2.67e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.72e-11,4;DOID:1612,2.72e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.41e-09!15;UBERON:0000179!2.41e-09!15;UBERON:0000463!2.41e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;8.09e-11;10!UBERON:0000158;8.09e-11;10!UBERON:0000478;1.36e-09;24!UBERON:0000178;8.70e-09;15!UBERON:0000179;8.70e-09;15!UBERON:0000463;8.70e-09;15!UBERON:0000305;1.92e-08;7!UBERON:0006947;2.81e-08;3!UBERON:0004054;2.81e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.27e-09,14;UBERON:0000158,1.27e-09,14;UBERON:0000478,1.54e-09,24;UBERON:0000178,1.04e-08,15;UBERON:0000179,1.04e-08,15;UBERON:0000463,1.04e-08,15;UBERON:0000305,1.97e-08,7;UBERON:0006947,3.15e-08,3;UBERON:0004054,3.15e-08,3;UBERON:0004871,2.50e-07,8 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,1.31064823278103,1.31883489114227,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.492603536699674,0.236132343941038,0,1.91914699048606,0.619264493264304,0,0,0,0,0,0,0,1.20326668482085,2.17010870715852,0,0.647787332037959,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,8.65522988500866,18.8645166119599,7.40165396398233,0.83593247695339,0,0.473447805734733,0,4.34500781852177,3.24066498222321,2.21533894583621,3.79125409271022,5.12365278902701,8.58391693895196,6.08420247033602,5.52700035571697,2.31842468588042,0.444859689486181,1.33770414044857,2.09071047609954,1.35971211237079,0.766440987203842,1.03088233644789,2.53019692019503,0.318565414324097,0.651083453856419,0,0.451725357233318,0.383959833463255,1.24930726552346,0.947109008176067,0,10.4835506476861,14.4417705723094,6.80674698249155,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.625098097988558,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41463099414651,0.122988438543114,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0,18.1747011530633,5.15091697256924,0,0,0,0,0,0,0,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56919201590938,6.10795356625974,8.19384784466166,7.18721003166591,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,1.44737618286021,3.01999881146064,0.960548020230999,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0.802025881213139,0.644566922551274,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.764628819135115,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0.422215270595328,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,2.1440859791201,2.05681136543097,0,3.24018862342869,1.58625035258854,0,0,0,0,0.144269212976445,1.84968792705877,0.637705090915289,0.199579371432817,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,1.33228787199128,0,0,0.146508179271894,0,6.24082951953879,0.284136146806413,2.3874448473769,4.75143489332222,3.99308912729002,0,0,0.890469640183247,0.16480387422676,0,0.398495976502139,0.276283915531148,0,0,0.738508832766417,0,0.269605053441981,0,0,0.394573622547734,0,0,0,0,0,3.64598865519327,14.3434399993761,0.724999575434793,0.1137934482855,0,0.945550727071745,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,11.2976313150149,7.53964213042086,11.9512109114209,2.23300811812344,0.915975934018623,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.0884575645033392,0.611030144933625,1.77912677208373,0.741383633679017,1.04421949505455,0,0,0,0,0,0,3.94584402849391,1.20990716048664,0,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0.416024019039416,0,0.293977192243133,0.522355239482415,1.22308667769421,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0.39961921916426,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0.399358000997982,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0.2249738915515,0.77380195455795,0,1.0063040627978,0.315222829196793,1.73100140845494,0,0,1.91915197319445,0,0,0,0,0,0,0,0,1.70388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0.414239055347196,0.496166021811951,0,0.121792598380896,0.638341257770182,0,0,0.306345576763462,0.327872630709804,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.770479321629213,0,0,0.453411851024545,0.463044948647668,0.734210113519403,0.179088841081487,0.308801447160972,0,1.06013487567529,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0.211312123358627,3.59977312538874,0,0.172214979660816,0,0,0,0,6.39471856518258,6.14601424961086,0,9.71965779908924,0,0,1.11542187833102,0.558644917973244,0,0,0,0.352675943690684,0.3062454773532,0,0,0.159633859057151,0,0,0,0,2.85538840518309,0,0,0.366857197043358,0,0,0,0,0,0.20170506870352,0,6.54766736203556,0.163771917510097,0,0,0,0,0,0,0,1.48863353516788,0,0.255524855279191,0,0,0,0.227662191351298,2.7497734750418,0.115233987555779,0,0,0,0,0,0.863424021355654,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,1.72090943528111,0,0,15.6653208570644,0.22910686854405,0,0,0,0,0,0,0,0,1.94284397223656,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0.735444965261716,0,0,0,0,0,0.281951753939561,0,0,0.178553938605658,1.05868461514708,0,0,0,0,1.41994405973866,0,0,1.5870805215462,0,0,0,0,0,9.88248307889208,0.101988829741982,0,0.459474497674225,0,0.0757786982182394,0,0,0,0,0.714193294391221,0.968833647540092,1.80016671457988,0.33639558774184,0.0636471582781649,1.61693751166575,0,0.342233301085281,0.134704106029175,0.215166616178029,0,0.732629417498771,0.640364075266293,0,0.449126010532934,2.34640942403454,0.122241444182866,0,0,0.603821380773079,0.320568492303233 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,1.31064823278103,1.31883489114227,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.492603536699674,0.236132343941038,0,1.91914699048606,0.619264493264304,0,0,0,0,0,0,0,1.20326668482085,2.17010870715852,0,0.647787332037959,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,8.65522988500866,18.8645166119599,7.40165396398233,0.83593247695339,0,0.473447805734733,0,4.34500781852177,3.24066498222321,2.21533894583621,3.79125409271022,5.12365278902701,8.58391693895196,6.08420247033602,5.52700035571697,2.31842468588042,0.444859689486181,1.33770414044857,2.09071047609954,1.35971211237079,0.766440987203842,1.03088233644789,2.53019692019503,0.318565414324097,0.651083453856419,0,0.451725357233318,0.383959833463255,1.24930726552346,0.947109008176067,0,10.4835506476861,14.4417705723094,6.80674698249155,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.625098097988558,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41463099414651,0.122988438543114,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0,18.1747011530633,5.15091697256924,0,0,0,0,0,0,0,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56919201590938,6.10795356625974,8.19384784466166,7.18721003166591,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,1.44737618286021,3.01999881146064,0.960548020230999,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0.802025881213139,0.644566922551274,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.764628819135115,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0.422215270595328,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,2.1440859791201,2.05681136543097,0,3.24018862342869,1.58625035258854,0,0,0,0,0.144269212976445,1.84968792705877,0.637705090915289,0.199579371432817,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,1.33228787199128,0,0,0.146508179271894,0,6.24082951953879,0.284136146806413,2.3874448473769,4.75143489332222,3.99308912729002,0,0,0.890469640183247,0.16480387422676,0,0.398495976502139,0.276283915531148,0,0,0.738508832766417,0,0.269605053441981,0,0,0.394573622547734,0,0,0,0,0,3.64598865519327,14.3434399993761,0.724999575434793,0.1137934482855,0,0.945550727071745,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,11.2976313150149,7.53964213042086,11.9512109114209,2.23300811812344,0.915975934018623,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.0884575645033392,0.611030144933625,1.77912677208373,0.741383633679017,1.04421949505455,0,0,0,0,0,0,3.94584402849391,1.20990716048664,0,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0.416024019039416,0,0.293977192243133,0.522355239482415,1.22308667769421,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0.39961921916426,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0.399358000997982,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0.2249738915515,0.77380195455795,0,1.0063040627978,0.315222829196793,1.73100140845494,0,0,1.91915197319445,0,0,0,0,0,0,0,0,1.70388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0.414239055347196,0.496166021811951,0,0.121792598380896,0.638341257770182,0,0,0.306345576763462,0.327872630709804,0,0,0,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.770479321629213,0,0,0.453411851024545,0.463044948647668,0.734210113519403,0.179088841081487,0.308801447160972,0,1.06013487567529,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0.211312123358627,3.59977312538874,0,0.172214979660816,0,0,0,0,6.39471856518258,6.14601424961086,0,9.71965779908924,0,0,1.11542187833102,0.558644917973244,0,0,0,0.352675943690684,0.3062454773532,0,0,0.159633859057151,0,0,0,0,2.85538840518309,0,0,0.366857197043358,0,0,0,0,0,0.20170506870352,0,6.54766736203556,0.163771917510097,0,0,0,0,0,0,0,1.48863353516788,0,0.255524855279191,0,0,0,0.227662191351298,2.7497734750418,0.115233987555779,0,0,0,0,0,0.863424021355654,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,1.72090943528111,0,0,15.6653208570644,0.22910686854405,0,0,0,0,0,0,0,0,1.94284397223656,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0.735444965261716,0,0,0,0,0,0.281951753939561,0,0,0.178553938605658,1.05868461514708,0,0,0,0,1.41994405973866,0,0,1.5870805215462,0,0,0,0,0,9.88248307889208,0.101988829741982,0,0.459474497674225,0,0.0757786982182394,0,0,0,0,0.714193294391221,0.968833647540092,1.80016671457988,0.33639558774184,0.0636471582781649,1.61693751166575,0,0.342233301085281,0.134704106029175,0.215166616178029,0,0.732629417498771,0.640364075266293,0,0.449126010532934,2.34640942403454,0.122241444182866,0,0,0.603821380773079,0.320568492303233 | ||
|short_description=p@chr10:8107688..8107696,+ | |||
}} | }} |
Latest revision as of 16:00, 23 July 2015
Short description: | p@chr10:8107688..8107696, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8107688..8107696, + |
Coexpression cluster: | C3051_MCF7_CD4_CD8_seminal_breast_choriocarcinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.82e-12 | 25 |
pro-T cell | 2.82e-12 | 25 |
mature alpha-beta T cell | 3.51e-10 | 18 |
alpha-beta T cell | 3.51e-10 | 18 |
immature T cell | 3.51e-10 | 18 |
mature T cell | 3.51e-10 | 18 |
immature alpha-beta T cell | 3.51e-10 | 18 |
natural killer cell | 7.30e-09 | 3 |
pro-NK cell | 7.30e-09 | 3 |
lymphoid lineage restricted progenitor cell | 1.37e-07 | 52 |
CD4-positive, alpha-beta T cell | 1.66e-07 | 6 |
lymphocyte | 2.22e-07 | 53 |
common lymphoid progenitor | 2.22e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.27e-09 | 14 |
membranous layer | 1.27e-09 | 14 |
extraembryonic structure | 1.54e-09 | 24 |
blood | 1.04e-08 | 15 |
haemolymphatic fluid | 1.04e-08 | 15 |
organism substance | 1.04e-08 | 15 |
amnion | 1.97e-08 | 7 |
male genital duct | 3.15e-08 | 3 |
internal male genitalia | 3.15e-08 | 3 |
somatic layer of lateral plate mesoderm | 2.50e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.72e-11 | 4 |
breast cancer | 2.72e-11 | 4 |