FFCP PHASE1:Hg19::chr11:47574673..47574700,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:47574673..47574700,- to FFCP PHASE1:Hg19::chr11:47574673..47574700,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10658 | |EntrezGene=10658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2549 | |HGNC=2549 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001nfn.2,uc001nfp.2,uc001nfq.1_5end | |||
|cluster_id=chr11:47574673..47574700,- | |||
|description=CAGE_peak_1_at_CELF1_5end | |||
|id=chr11:47574673..47574700,- | |||
|ontology_enrichment_celltype=CL:0002319!1.85e-08!25;CL:0000860!2.44e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.81e-08;25!CL:0000860;2.82e-08;33!CL:0002057;2.82e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.85e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.86e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.86e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.38e-17!94;UBERON:0001016!6.38e-17!94;UBERON:0001017!2.27e-16!82;UBERON:0005743!1.78e-15!86;UBERON:0000924!4.08e-13!173;UBERON:0006601!4.08e-13!173;UBERON:0004121!8.69e-13!169;UBERON:0000955!1.06e-12!69;UBERON:0006238!1.06e-12!69;UBERON:0007023!1.47e-12!115;UBERON:0001049!8.35e-12!57;UBERON:0005068!8.35e-12!57;UBERON:0006241!8.35e-12!57;UBERON:0007135!8.35e-12!57;UBERON:0003080!7.49e-11!42;UBERON:0002780!2.34e-10!41;UBERON:0001890!2.34e-10!41;UBERON:0006240!2.34e-10!41;UBERON:0002346!3.35e-10!90;UBERON:0002616!4.17e-10!59;UBERON:0001869!5.51e-10!32;UBERON:0003075!6.17e-10!86;UBERON:0007284!6.17e-10!86;UBERON:0001893!1.23e-09!34;UBERON:0002791!1.76e-09!33;UBERON:0002020!2.38e-09!34;UBERON:0003528!2.38e-09!34;UBERON:0000153!7.98e-09!129;UBERON:0007811!7.98e-09!129;UBERON:0000033!2.52e-08!123;UBERON:0003056!2.76e-08!61;UBERON:0000956!2.97e-07!25;UBERON:0000203!2.97e-07!25;UBERON:0002619!8.84e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.85e-09;32!UBERON:0002791;1.09e-08;32!UBERON:0003528;1.66e-08;34!UBERON:0002020;1.66e-08;34!UBERON:0001893;1.71e-08;34!UBERON:0002780;3.60e-08;41!UBERON:0001890;3.60e-08;41!UBERON:0000956;2.93e-07;25!UBERON:0000203;2.93e-07;25!UBERON:0000922;5.59e-07;49!UBERON:0000073;6.78e-07;53!UBERON:0002616;6.78e-07;53!UBERON:0001016;8.76e-07;83!UBERON:0002619;8.99e-07;22!UBERON:0000955;1.00e-06;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.58e-17,89;UBERON:0001017,6.97e-16,81;UBERON:0007023,2.67e-12,114;UBERON:0000955,3.08e-12,68;UBERON:0006238,3.08e-12,68;UBERON:0004121,1.12e-11,171;UBERON:0000924,1.12e-11,171;UBERON:0006601,1.12e-11,171;UBERON:0000073,2.43e-11,53;UBERON:0002616,2.43e-11,53;UBERON:0001049,2.48e-11,56;UBERON:0005068,2.48e-11,56;UBERON:0006241,2.48e-11,56;UBERON:0007135,2.48e-11,56;UBERON:0002780,2.34e-10,41;UBERON:0001890,2.34e-10,41;UBERON:0003080,2.34e-10,41;UBERON:0006240,2.34e-10,41;UBERON:0001869,5.51e-10,32;UBERON:0011216,6.08e-10,223;UBERON:0001893,1.23e-09,34;UBERON:0002791,1.67e-09,32;UBERON:0003528,2.38e-09,34;UBERON:0002020,2.38e-09,34;UBERON:0002346,1.34e-08,86;UBERON:0003075,2.48e-08,82;UBERON:0007284,2.48e-08,82;UBERON:0003056,7.74e-08,61;UBERON:0000956,2.97e-07,25;UBERON:0000203,2.97e-07,25;UBERON:0002619,8.84e-07,22 | |||
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| ||
|short_description=p1@CELF1 | |||
}} | }} |
Latest revision as of 05:48, 18 September 2015
Short description: | p1@CELF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CELF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001nfn.2, uc001nfp.2, uc001nfq.1_5end |
EntrezGene: | CELF1 |
HGNC: | 2549 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.85e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.58e-17 | 89 |
central nervous system | 6.97e-16 | 81 |
adult organism | 2.67e-12 | 114 |
brain | 3.08e-12 | 68 |
future brain | 3.08e-12 | 68 |
ectoderm-derived structure | 1.12e-11 | 171 |
ectoderm | 1.12e-11 | 171 |
presumptive ectoderm | 1.12e-11 | 171 |
regional part of nervous system | 2.43e-11 | 53 |
regional part of brain | 2.43e-11 | 53 |
neural tube | 2.48e-11 | 56 |
neural rod | 2.48e-11 | 56 |
future spinal cord | 2.48e-11 | 56 |
neural keel | 2.48e-11 | 56 |
regional part of forebrain | 2.34e-10 | 41 |
forebrain | 2.34e-10 | 41 |
anterior neural tube | 2.34e-10 | 41 |
future forebrain | 2.34e-10 | 41 |
cerebral hemisphere | 5.51e-10 | 32 |
organ system subdivision | 6.08e-10 | 223 |
telencephalon | 1.23e-09 | 34 |
regional part of telencephalon | 1.67e-09 | 32 |
brain grey matter | 2.38e-09 | 34 |
gray matter | 2.38e-09 | 34 |
neurectoderm | 1.34e-08 | 86 |
neural plate | 2.48e-08 | 82 |
presumptive neural plate | 2.48e-08 | 82 |
pre-chordal neural plate | 7.74e-08 | 61 |
cerebral cortex | 2.97e-07 | 25 |
pallium | 2.97e-07 | 25 |
regional part of cerebral cortex | 8.84e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.86e-07 | 143 |