FFCP PHASE1:Hg19::chr11:58910401..58910417,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:58910401..58910417,+ to FFCP PHASE1:Hg19::chr11:58910401..58910417,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=63901 | |EntrezGene=63901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24725 | |HGNC=24725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=69bp_to_ENST00000531676_5end | |||
|cluster_id=chr11:58910401..58910417,+ | |||
|description=CAGE_peak_4_at_FAM111A_5end | |||
|id=chr11:58910401..58910417,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.75e-18!63;CL:0000576!2.75e-18!63;CL:0000040!2.75e-18!63;CL:0000559!2.75e-18!63;CL:0000839!6.18e-18!70;CL:0002057!7.70e-18!42;CL:0002009!4.22e-17!65;CL:0000766!1.05e-16!76;CL:0000860!1.55e-16!45;CL:0000557!1.22e-15!71;CL:0002087!2.06e-11!119;CL:0002031!6.80e-11!124;CL:0000763!6.13e-10!112;CL:0000049!6.13e-10!112;CL:0000738!6.42e-10!140;CL:0000037!5.34e-08!172;CL:0000566!5.34e-08!172;CL:0000134!8.88e-08!358;CL:0002320!2.55e-07!365;CL:0002032!2.84e-07!165;CL:0000837!2.84e-07!165;CL:0000988!4.11e-07!182;CL:0000219!4.96e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.90e-21;33!CL:0002057;7.90e-21;33!CL:0000576;5.91e-18;48!CL:0000473;4.75e-16;39!CL:0000234;4.75e-16;39!CL:0000766;9.02e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.42e-23,42;CL:0002057,1.42e-23,42;CL:0000473,6.01e-22,48;CL:0000234,6.01e-22,48;CL:0002194,4.45e-21,59;CL:0000576,4.45e-21,59;CL:0000040,4.45e-21,59;CL:0000559,4.45e-21,59;CL:0000839,4.57e-20,66;CL:0002009,5.87e-20,61;CL:0000766,1.27e-19,72;CL:0000557,3.07e-18,67;CL:0000763,6.73e-12,108;CL:0000049,6.73e-12,108;CL:0002087,3.31e-08,115;CL:0000738,7.96e-08,136;CL:0002031,1.39e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;8.47e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.49e-17!112;UBERON:0002390!4.74e-16!102;UBERON:0003061!4.74e-16!102;UBERON:0002371!2.92e-13!80;UBERON:0002405!1.48e-12!115;UBERON:0001474!2.17e-12!86;UBERON:0004765!1.21e-11!101;UBERON:0001434!1.21e-11!101;UBERON:0002384!1.74e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.44e-19,108;UBERON:0002390,1.87e-17,98;UBERON:0003061,1.87e-17,98;UBERON:0002371,1.72e-16,76;UBERON:0002405,2.88e-16,93;UBERON:0001474,3.23e-15,82;UBERON:0004765,1.07e-12,90;UBERON:0001434,7.54e-11,100;UBERON:0003081,6.46e-08,203 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,0,0,0,2.53299878168311,0,0.261185628199839,0,0,0.218441372130172,0,0.247532705920093,0.662794751455832,0.672325146451775,0.602694528023977,0.730310090387373,1.46379839637152,0.369363174230364,0.408001382488506,0,2.0036519099174,0.410623275218653,0.627713197974014,0.152826811495903,0.164201178899891,0.472264687882075,0.393364276848904,1.91914699048606,0.77408061658038,0,0,0,0.697204805222715,0.426507697462265,1.46800219667424,1.10799081706375,0.601633342410425,0.868043482863407,2.91090116511902,1.29557466407592,1.54545340580512,1.30858414901608,0.377875943688809,0.970336244751265,1.16214518452842,0.411167888021826,1.23882548358041,1.43846196161075,2.0492856522328,1.89185783910868,1.03423704220986,1.29096936716765,1.35426486594342,1.69418105588344,1.09162460023138,0.674170453335254,2.14258724659632,2.56743221660875,0.639337125799041,2.30895910130701,2.19410023383795,2.55734850319616,3.77272010217159,3.97169657283798,1.86846674698672,3.51748131359441,3.65038042894141,3.69221035998698,4.84319602106695,4.05105399586321,5.37986058649504,1.90129757680748,1.4882300997553,1.67726916406701,3.59451619668784,3.15371474967163,4.66104201421532,0.570025487482497,0.59675003159727,1.64397738388171,0,0.546138611262131,0,0,0,0,0,0.954053754535364,1.1384259382189,0,0.764546456250458,3.96513985737078,0,1.31692042387539,0.196709770113833,0,0,0.668745981562712,0,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0.541607727530031,0.640456598628376,0.260118695119756,0.986627427622057,0,1.15921234294021,0.296573126324121,1.07016331235885,2.09071047609954,0.453237370790265,0,0,0.506039384039006,0.637130828648193,0,0.950452044448374,0.752875595388864,0.895906278080929,1.24930726552346,0.236777252044017,0.821127996921047,0.80642697289893,0.267440195783507,0.289648807765598,0,1.34140171940727,0.383587685530591,0.361439152384566,0,0.724232594804119,0,0.973269740605272,1.13441780596881,0.221729397462564,0.351339142772504,0.523916301990851,0,0,0.324547393654683,0.522389211897802,0.531831842075461,0.476981248610684,0,0.371457501329565,0.198762407366705,0,0,0.56530794192401,0,0,0.208994966536811,1.55050055501597,1.06729878806013,4.35136796594071,1.20848795132744,0.760272105718513,0.976248230192678,1.10298924103761,0,2.58969212023831,1.57170560838319,1.46394924628319,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,1.98613771219828,0.573673241497627,0.709336764396714,0,0,0.24666754841716,2.17847724779836,0.404132016209064,0.817309515567294,1.21085942115945,1.15235184896,0,0,0,0.747243402759005,0.587172493218824,0,0.140450806702248,0.61246251376468,0.737005903870608,1.03325781175765,3.56400857184616,2.22540236350701,0.910161361938026,0,0.505008341862199,0.500474079487857,0.554128230968366,1.31693286264251,0.919463387397059,0.45071417671979,0.113432183160021,1.4351170855109,1.06778694409284,1.05965950579781,1.20036438433761,1.44273540933814,1.03056216018252,1.11670113798954,0.506328996723799,0.389748020644795,1.00973509697646,1.74894807420369,2.26304479546337,1.06502877754984,0.302256294682921,0.67824236924195,0,0.272746120590835,0.573609190778008,0,0,0,0,0.252320850875628,0,1.56449532329816,1.28648187638577,0,1.39310378409594,0,0,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0,0.738155454624648,0,0,0,2.53510069643662,0,2.36315962672562,2.20731549707325,1.96781501668982,0.857839051492628,0,0,0,0.0925884451585296,0.977424915930974,0,0,0.579652024875384,0.587043471179108,1.58803092537181,0.925971025153221,2.85381228351897,0,0,0.738651018262192,1.63802985597466,0.743155811443641,0,0.16798212819886,0.283550194484773,0,0,0,1.97065295158377,0.792435906119034,0.207328115540772,0.288239906833923,0,1.07946420296687,0.381988425558278,1.17217447210047,0,0.616964956219941,0.600686115687835,1.71495859578347,0.560655421726804,0,0.5867062865676,0,0,0,2.12750493267896,0,0.257207374262142,0,0,0.57191197463259,0.542621605391443,0,0,0,0,0.301439377059586,0,0,1.2162378064119,0.502257091432126,0,0.479249710983165,0,0,0.289562613335158,0.61642896765115,0.537182889719687,0.672510863961164,0.788123040807709,0.215627574859517,0.513372145118994,0.254094624222463,0,0,0.167516265334349,0,2.24702107184155,0,1.65766205374414,0.36807447515742,0,0.271265023699736,1.03985430765404,0.356857977594324,0.473107245101804,1.05427273493442,0.902838299183157,0,0,0,0.184369168541703,1.12948698808508,0.195801157462741,0,1.24060815673732,1.2942852049117,0.533637789017222,0,0,0,0.248107807818777,0.460385919864187,0,0,0,0,0,0.616838775210622,0.710246901252508,0.9033987161519,0,0.348631135379878,0.846016147141356,0,0.0920809889358963,1.7222167224691,1.45672934405374,0.917870904715969,0,0.15403067420883,0,0,0.422206515571503,0,0.170093705276516,0.863663664408557,0,0.270946437543853,0,0.509752546090077,0,0,2.41185864310528,0.522870902049801,0,0,0,2.06082023295445,0.915694648183434,0.907604499126468,0,0.650060246036521,0,0.48335359146061,0.154048617114644,0.307007349452259,0.13783657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| ||
|short_description=p4@FAM111A | |||
}} | }} |
Latest revision as of 11:52, 18 September 2015
Short description: | p4@FAM111A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM111A_5end |
Coexpression cluster: | NA |
Association with transcript: | 69bp_to_ENST00000531676_5end |
EntrezGene: | FAM111A |
HGNC: | 24725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.42e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.42e-23 | 42 |
defensive cell | 6.01e-22 | 48 |
phagocyte | 6.01e-22 | 48 |
monopoietic cell | 4.45e-21 | 59 |
monocyte | 4.45e-21 | 59 |
monoblast | 4.45e-21 | 59 |
promonocyte | 4.45e-21 | 59 |
myeloid lineage restricted progenitor cell | 4.57e-20 | 66 |
macrophage dendritic cell progenitor | 5.87e-20 | 61 |
myeloid leukocyte | 1.27e-19 | 72 |
granulocyte monocyte progenitor cell | 3.07e-18 | 67 |
myeloid cell | 6.73e-12 | 108 |
common myeloid progenitor | 6.73e-12 | 108 |
nongranular leukocyte | 3.31e-08 | 115 |
leukocyte | 7.96e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 1.39e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.44e-19 | 108 |
hematopoietic system | 1.87e-17 | 98 |
blood island | 1.87e-17 | 98 |
bone marrow | 1.72e-16 | 76 |
immune system | 2.88e-16 | 93 |
bone element | 3.23e-15 | 82 |
skeletal element | 1.07e-12 | 90 |
skeletal system | 7.54e-11 | 100 |
lateral plate mesoderm | 6.46e-08 | 203 |